RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 XAGE1AQ9HD64 81 aa3.1□□□□□ -1.91
VCAN-209ENST00000513016 DAND5Q8N907 189 aa3.1□□□□□ -1.91
VCAN-209ENST00000513016 CDKN2A-AS1Q9UH64 79 aa3.1□□□□□ -1.91
VCAN-209ENST00000513016 DYSFO75923 2080 aa3.1□□□□□ -1.91
VCAN-209ENST00000513016 TRBV27A0A0K0K1C4 114 aa3.1□□□□□ -1.91
VCAN-209ENST00000513016 FHL3Q13643 280 aa3.1□□□□□ -1.91
VCAN-209ENST00000513016 Q6ZTC4 211 aa3.1□□□□□ -1.91
VCAN-209ENST00000513016 SPTSSBQ8NFR3 76 aa3.1□□□□□ -1.91
VCAN-209ENST00000513016 ETDBQ3ZM63 59 aa3.1□□□□□ -1.91
VCAN-209ENST00000513016 TIMM17BO60830 172 aa3.1□□□□□ -1.91
VCAN-209ENST00000513016 CDPF1Q6NVV7 123 aa3.1□□□□□ -1.91
VCAN-209ENST00000513016 Q8IZM0 81 aa3.1□□□□□ -1.91
VCAN-209ENST00000513016 Q8N2B8 174 aa3.1□□□□□ -1.91
VCAN-209ENST00000513016 USP17L23D6RBM5 183 aa3.09□□□□□ -1.91
VCAN-209ENST00000513016 BRWD1-AS2P59051 145 aa3.09□□□□□ -1.91
VCAN-209ENST00000513016 COA6Q5JTJ3 125 aaKnown RBP3.09□□□□□ -1.91
VCAN-209ENST00000513016 C11orf1Q9H5F2 150 aa3.09□□□□□ -1.91
VCAN-209ENST00000513016 MED13Q9UHV7 2174 aa3.09□□□□□ -1.91
VCAN-209ENST00000513016 DSCAMO60469 2012 aa3.09□□□□□ -1.91
VCAN-209ENST00000513016 M0QXV9 152 aa3.09□□□□□ -1.91
VCAN-209ENST00000513016 C1orf229Q6ZS94 237 aaPredicted RBP3.09□□□□□ -1.91
VCAN-209ENST00000513016 PLA2G2EQ9NZK7 142 aa3.09□□□□□ -1.91
VCAN-209ENST00000513016 POM121L12Q8N7R1 296 aa3.09□□□□□ -1.91
VCAN-209ENST00000513016 TMEM223A0PJW6 202 aa3.09□□□□□ -1.91
VCAN-209ENST00000513016 DENND4CQ5VZ89 1909 aa3.09□□□□□ -1.91
VCAN-209ENST00000513016 ATOX1O00244 68 aa3.09□□□□□ -1.92
VCAN-209ENST00000513016 MRPL55Q7Z7F7 128 aaKnown RBP3.09□□□□□ -1.92
VCAN-209ENST00000513016 K7ERJ3 54 aa3.09□□□□□ -1.92
VCAN-209ENST00000513016 ZNF22P17026 224 aaPredicted RBP3.09□□□□□ -1.92
VCAN-209ENST00000513016 ANKRD39Q53RE8 183 aa3.09□□□□□ -1.92
VCAN-209ENST00000513016 SPINK6Q6UWN8 80 aa3.09□□□□□ -1.92
VCAN-209ENST00000513016 LIMD2Q9BT23 127 aa3.09□□□□□ -1.92
VCAN-209ENST00000513016 COL4A3Q01955 1670 aa3.09□□□□□ -1.92
VCAN-209ENST00000513016 C10orf25Q5T742 122 aa3.09□□□□□ -1.92
VCAN-209ENST00000513016 PPDPFQ9H3Y8 114 aa3.09□□□□□ -1.92
VCAN-209ENST00000513016 A0A1B0GXF2 115 aa3.08□□□□□ -1.92
VCAN-209ENST00000513016 ACACBO00763 2458 aa3.08□□□□□ -1.92
VCAN-209ENST00000513016 KRTAP24-1Q3LI83 254 aa3.08□□□□□ -1.92
VCAN-209ENST00000513016 C2orf48Q96LS8 159 aa3.08□□□□□ -1.92
VCAN-209ENST00000513016 LOC100131303A0A0U1RQF7 123 aa3.08□□□□□ -1.92
VCAN-209ENST00000513016 REG3GQ6UW15 175 aa3.08□□□□□ -1.92
VCAN-209ENST00000513016 LINC00337Q8N6G1 96 aa3.08□□□□□ -1.92
VCAN-209ENST00000513016 PTH2Q96A98 100 aa3.08□□□□□ -1.92
VCAN-209ENST00000513016 IGLV9-49A0A0B4J1Y8 123 aa3.08□□□□□ -1.92
VCAN-209ENST00000513016 RNASE3P12724 160 aaKnown RBP3.08□□□□□ -1.92
VCAN-209ENST00000513016 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.08□□□□□ -1.92
VCAN-209ENST00000513016 SPATA3Q8NHX4 192 aa3.08□□□□□ -1.92
VCAN-209ENST00000513016 C6orf99Q4VX62 202 aa3.08□□□□□ -1.92
VCAN-209ENST00000513016 LINC00308Q8TCZ7 52 aa3.08□□□□□ -1.92
VCAN-209ENST00000513016 IGKV2-28A0A075B6P5 120 aa3.07□□□□□ -1.92
VCAN-209ENST00000513016 A0A1W2PPR1 153 aa3.07□□□□□ -1.92
VCAN-209ENST00000513016 IGKV2D-28P01615 120 aa3.07□□□□□ -1.92
VCAN-209ENST00000513016 LINC01561Q8N1V8 128 aa3.07□□□□□ -1.92
VCAN-209ENST00000513016 C6orf223Q8N319 242 aa3.07□□□□□ -1.92
VCAN-209ENST00000513016 PLXNB3Q9ULL4 1909 aa3.07□□□□□ -1.92
VCAN-209ENST00000513016 TSHBP01222 138 aa3.07□□□□□ -1.92
VCAN-209ENST00000513016 Q6JHZ5 121 aa3.07□□□□□ -1.92
VCAN-209ENST00000513016 C3orf84H3BNL1 204 aa3.07□□□□□ -1.92
VCAN-209ENST00000513016 BRK1Q8WUW1 75 aa3.07□□□□□ -1.92
VCAN-209ENST00000513016 KIAA1549LQ6ZVL6 1849 aa3.07□□□□□ -1.92
VCAN-209ENST00000513016 C1orf137Q5JT78 98 aa3.07□□□□□ -1.92
VCAN-209ENST00000513016 ATP5EP2Q5VTU8 51 aa3.07□□□□□ -1.92
VCAN-209ENST00000513016 C1orf158Q8N1D5 194 aa3.07□□□□□ -1.92
VCAN-209ENST00000513016 CDC42SE2Q9NRR3 84 aa3.07□□□□□ -1.92
VCAN-209ENST00000513016 FAM236DA0A1B0GTK5 79 aa3.07□□□□□ -1.92
VCAN-209ENST00000513016 CYSRT1A8MQ03 144 aa3.07□□□□□ -1.92
VCAN-209ENST00000513016 B5MCH6 92 aa3.07□□□□□ -1.92
VCAN-209ENST00000513016 LST1O00453 97 aa3.07□□□□□ -1.92
VCAN-209ENST00000513016 FAM236CP0DP71 79 aa3.07□□□□□ -1.92
VCAN-209ENST00000513016 FHL2Q14192 279 aa3.07□□□□□ -1.92
VCAN-209ENST00000513016 BEAN1Q3B7T3 259 aa3.07□□□□□ -1.92
VCAN-209ENST00000513016 LINC01556Q5JQF7 62 aa3.07□□□□□ -1.92
VCAN-209ENST00000513016 MDFIQ99750 246 aa3.07□□□□□ -1.92
VCAN-209ENST00000513016 IGKV3D-7A0A0C4DH55 119 aa3.07□□□□□ -1.92
VCAN-209ENST00000513016 IGLV2-8P01709 118 aa3.07□□□□□ -1.92
VCAN-209ENST00000513016 LYPD5Q6UWN5 251 aa3.06□□□□□ -1.92
VCAN-209ENST00000513016 CUL9Q8IWT3 2517 aa3.06□□□□□ -1.92
VCAN-209ENST00000513016 LINC00173Q6ZV60 143 aa3.06□□□□□ -1.92
VCAN-209ENST00000513016 DOCK11Q5JSL3 2073 aa3.06□□□□□ -1.92
VCAN-209ENST00000513016 H3BNG1 76 aa3.06□□□□□ -1.92
VCAN-209ENST00000513016 PLA2G1BP04054 148 aaKnown RBP3.06□□□□□ -1.92
VCAN-209ENST00000513016 SERP1Q9Y6X1 66 aa3.06□□□□□ -1.92
VCAN-209ENST00000513016 POLR2KP53803 58 aaKnown RBP3.06□□□□□ -1.92
VCAN-209ENST00000513016 TEN1Q86WV5 123 aa3.06□□□□□ -1.92
VCAN-209ENST00000513016 CIRBP-AS1Q8TBR5 109 aa3.06□□□□□ -1.92
VCAN-209ENST00000513016 RNF185Q96GF1 192 aa3.06□□□□□ -1.92
VCAN-209ENST00000513016 PRR15LQ9BU68 103 aa3.06□□□□□ -1.92
VCAN-209ENST00000513016 ADAMTS20P59510 1910 aa3.06□□□□□ -1.92
VCAN-209ENST00000513016 RPL37AP8A6NKH3 93 aa3.06□□□□□ -1.92
VCAN-209ENST00000513016 FOXI1Q12951 378 aa3.06□□□□□ -1.92
VCAN-209ENST00000513016 CLEC2BQ92478 149 aa3.06□□□□□ -1.92
VCAN-209ENST00000513016 KMT2EQ8IZD2 1858 aa3.06□□□□□ -1.92
VCAN-209ENST00000513016 TTC28Q96AY4 2481 aa3.06□□□□□ -1.92
VCAN-209ENST00000513016 V9GYY9 64 aa3.06□□□□□ -1.92
VCAN-209ENST00000513016 ZNF73O43830 326 aaPredicted RBP3.05□□□□□ -1.92
VCAN-209ENST00000513016 CCKP06307 115 aa3.05□□□□□ -1.92
VCAN-209ENST00000513016 HRCT1Q6UXD1 115 aa3.05□□□□□ -1.92
VCAN-209ENST00000513016 J3KT08 172 aa3.05□□□□□ -1.92
VCAN-209ENST00000513016 CRIP1P50238 77 aa3.05□□□□□ -1.92
VCAN-209ENST00000513016 CRIP3Q6Q6R5 217 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms