RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 LRBAP50851 2863 aa5.33□□□□□ -1.56
CPNE4-208ENST00000511604 PLAC8L1A1L4L8 177 aa5.33□□□□□ -1.56
CPNE4-208ENST00000511604 LYNX1G3V0Z9 82 aa5.33□□□□□ -1.56
CPNE4-208ENST00000511604 SOCS3O14543 225 aa5.33□□□□□ -1.56
CPNE4-208ENST00000511604 PAX4O43316 350 aa5.33□□□□□ -1.56
CPNE4-208ENST00000511604 BCE1O60756 84 aa5.33□□□□□ -1.56
CPNE4-208ENST00000511604 LYNX1P0DP58 116 aa5.33□□□□□ -1.56
CPNE4-208ENST00000511604 MED14OSP0DP75 135 aa5.33□□□□□ -1.56
CPNE4-208ENST00000511604 C20orf203Q8NBC4 194 aa5.33□□□□□ -1.56
CPNE4-208ENST00000511604 PTPRQQ9UMZ3 2332 aa5.32□□□□□ -1.56
CPNE4-208ENST00000511604 TRAV13-2A0A0B4J235 113 aa5.32□□□□□ -1.56
CPNE4-208ENST00000511604 F5H697 171 aa5.32□□□□□ -1.56
CPNE4-208ENST00000511604 IGLV1-47P01700 117 aa5.32□□□□□ -1.56
CPNE4-208ENST00000511604 FAM229BQ4G0N7 80 aa5.32□□□□□ -1.56
CPNE4-208ENST00000511604 SOSTDC1Q6X4U4 206 aa5.32□□□□□ -1.56
CPNE4-208ENST00000511604 MUC4Q99102 2169 aa5.32□□□□□ -1.56
CPNE4-208ENST00000511604 IGLV11-55A0A075B6I3 123 aa5.32□□□□□ -1.56
CPNE4-208ENST00000511604 A0A087WWL8 130 aa5.32□□□□□ -1.56
CPNE4-208ENST00000511604 TRBV6-5A0A0K0K1A5 114 aa5.32□□□□□ -1.56
CPNE4-208ENST00000511604 NDUFC1O43677 76 aa5.32□□□□□ -1.56
CPNE4-208ENST00000511604 RNASE3P12724 160 aaKnown RBP5.32□□□□□ -1.56
CPNE4-208ENST00000511604 RNASE4P34096 147 aaKnown RBP5.32□□□□□ -1.56
CPNE4-208ENST00000511604 RPL11P62913 178 aaKnown RBP5.32□□□□□ -1.56
CPNE4-208ENST00000511604 BLCAPP62952 87 aa5.32□□□□□ -1.56
CPNE4-208ENST00000511604 LPAL2Q16609 132 aa5.32□□□□□ -1.56
CPNE4-208ENST00000511604 TRAV21A0A0B4J279 112 aa5.31□□□□□ -1.56
CPNE4-208ENST00000511604 TRBV10-3A0A0K0K1G6 114 aa5.31□□□□□ -1.56
CPNE4-208ENST00000511604 NDUFB3O43676 98 aa5.31□□□□□ -1.56
CPNE4-208ENST00000511604 RNASE13Q5GAN3 156 aaKnown RBP5.31□□□□□ -1.56
CPNE4-208ENST00000511604 MRPL53Q96EL3 112 aaKnown RBP5.31□□□□□ -1.56
CPNE4-208ENST00000511604 ZNF625Q96I27 306 aaPredicted RBP5.31□□□□□ -1.56
CPNE4-208ENST00000511604 U3KQE9 123 aa5.31□□□□□ -1.56
CPNE4-208ENST00000511604 ZNF292O60281 2723 aa5.31□□□□□ -1.56
CPNE4-208ENST00000511604 NCR3O14931 201 aa5.31□□□□□ -1.56
CPNE4-208ENST00000511604 HIST2H2BCQ6DN03 193 aa5.31□□□□□ -1.56
CPNE4-208ENST00000511604 HIST2H2BDQ6DRA6 164 aa5.31□□□□□ -1.56
CPNE4-208ENST00000511604 LY6G5BQ8NDX9 201 aa5.31□□□□□ -1.56
CPNE4-208ENST00000511604 OVOL2Q9BRP0 275 aa5.31□□□□□ -1.56
CPNE4-208ENST00000511604 LAMTOR3Q9UHA4 124 aa5.31□□□□□ -1.56
CPNE4-208ENST00000511604 ABCA4P78363 2273 aa5.3□□□□□ -1.56
CPNE4-208ENST00000511604 OTOGLQ3ZCN5 2332 aa5.3□□□□□ -1.56
CPNE4-208ENST00000511604 F6UB75 175 aa5.3□□□□□ -1.56
CPNE4-208ENST00000511604 NDUFA1O15239 70 aa5.3□□□□□ -1.56
CPNE4-208ENST00000511604 CD28P10747 220 aa5.3□□□□□ -1.56
CPNE4-208ENST00000511604 ZFAND2AQ8N6M9 145 aa5.3□□□□□ -1.56
CPNE4-208ENST00000511604 FAM110DQ8TAY7 271 aaPredicted RBP5.3□□□□□ -1.56
CPNE4-208ENST00000511604 LENEPQ9Y5L5 61 aa5.3□□□□□ -1.56
CPNE4-208ENST00000511604 A0A087WYN8 130 aa5.3□□□□□ -1.56
CPNE4-208ENST00000511604 IBA57-AS1B1ANH7 110 aa5.3□□□□□ -1.56
CPNE4-208ENST00000511604 C4orf48Q5BLP8 95 aa5.3□□□□□ -1.56
CPNE4-208ENST00000511604 MED13LQ71F56 2210 aa5.3□□□□□ -1.56
CPNE4-208ENST00000511604 COL27A1Q8IZC6 1860 aaPredicted RBP5.29□□□□□ -1.56
CPNE4-208ENST00000511604 FAM104AQ969W3 186 aa5.29□□□□□ -1.56
CPNE4-208ENST00000511604 CSMD2Q7Z408 3487 aa5.29□□□□□ -1.56
CPNE4-208ENST00000511604 C15orf32Q32M92 178 aa5.29□□□□□ -1.56
CPNE4-208ENST00000511604 CELSR1Q9NYQ6 3014 aa5.28□□□□□ -1.56
CPNE4-208ENST00000511604 PIK3CD-AS1Q5SR53 167 aa5.28□□□□□ -1.56
CPNE4-208ENST00000511604 MRPL55Q7Z7F7 128 aaKnown RBP5.28□□□□□ -1.56
CPNE4-208ENST00000511604 MIR7-3HGQ8N6C7 128 aa5.28□□□□□ -1.56
CPNE4-208ENST00000511604 VPS13CQ709C8 3753 aa5.27□□□□□ -1.57
CPNE4-208ENST00000511604 IGKV3-7A0A075B6H7 116 aa5.27□□□□□ -1.57
CPNE4-208ENST00000511604 M0QY20 66 aa5.27□□□□□ -1.57
CPNE4-208ENST00000511604 ESRGQ1W209 222 aa5.27□□□□□ -1.57
CPNE4-208ENST00000511604 FAM74A4Q5TZK3 123 aa5.27□□□□□ -1.57
CPNE4-208ENST00000511604 Q9H8V8 135 aa5.27□□□□□ -1.57
CPNE4-208ENST00000511604 PF4P02776 101 aa5.27□□□□□ -1.57
CPNE4-208ENST00000511604 FDCSPQ8NFU4 85 aa5.27□□□□□ -1.57
CPNE4-208ENST00000511604 RNF5Q99942 180 aa5.27□□□□□ -1.57
CPNE4-208ENST00000511604 EP300Q09472 2414 aaPredicted RBP5.26□□□□□ -1.57
CPNE4-208ENST00000511604 TRAV10A0A0B4J240 114 aa5.26□□□□□ -1.57
CPNE4-208ENST00000511604 MIFP14174 115 aa5.26□□□□□ -1.57
CPNE4-208ENST00000511604 UNQ9165/PRO28630Q6UXU0 137 aa5.26□□□□□ -1.57
CPNE4-208ENST00000511604 STHQ8IWL8 128 aa5.26□□□□□ -1.57
CPNE4-208ENST00000511604 UBL5Q9BZL1 73 aa5.26□□□□□ -1.57
CPNE4-208ENST00000511604 Q9UF83 564 aa5.26□□□□□ -1.57
CPNE4-208ENST00000511604 FASNP49327 2511 aaKnown RBP5.26□□□□□ -1.57
CPNE4-208ENST00000511604 DAD1P61803 113 aa5.26□□□□□ -1.57
CPNE4-208ENST00000511604 CLEC19AQ6UXS0 136 aa5.26□□□□□ -1.57
CPNE4-208ENST00000511604 C6orf223Q8N319 242 aa5.26□□□□□ -1.57
CPNE4-208ENST00000511604 A0A087WZ39 114 aa5.25□□□□□ -1.57
CPNE4-208ENST00000511604 LECT2O14960 151 aa5.25□□□□□ -1.57
CPNE4-208ENST00000511604 CRPP02741 224 aa5.25□□□□□ -1.57
CPNE4-208ENST00000511604 CDKN2A-AS1Q9UH64 79 aa5.25□□□□□ -1.57
CPNE4-208ENST00000511604 FAM215AQ9Y5M1 114 aa5.25□□□□□ -1.57
CPNE4-208ENST00000511604 TRBV7-4A0A0J9YYF1 115 aa5.25□□□□□ -1.57
CPNE4-208ENST00000511604 IGKV2-29A2NJV5 120 aaPredicted RBP5.25□□□□□ -1.57
CPNE4-208ENST00000511604 H0YGX0 51 aa5.25□□□□□ -1.57
CPNE4-208ENST00000511604 LY6HO94772 140 aa5.25□□□□□ -1.57
CPNE4-208ENST00000511604 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.25□□□□□ -1.57
CPNE4-208ENST00000511604 CCDC140Q96MF4 163 aa5.25□□□□□ -1.57
CPNE4-208ENST00000511604 G3V318 75 aa5.24□□□□□ -1.57
CPNE4-208ENST00000511604 C11orf72Q8NBR9 251 aa5.24□□□□□ -1.57
CPNE4-208ENST00000511604 ITLN2Q8WWU7 325 aaPredicted RBP5.24□□□□□ -1.57
CPNE4-208ENST00000511604 ANKRD11Q6UB99 2663 aaPredicted RBP5.24□□□□□ -1.57
CPNE4-208ENST00000511604 BSPH1Q075Z2 132 aa5.24□□□□□ -1.57
CPNE4-208ENST00000511604 ECSCRQ19T08 205 aa5.24□□□□□ -1.57
CPNE4-208ENST00000511604 LINC00337Q8N6G1 96 aa5.24□□□□□ -1.57
CPNE4-208ENST00000511604 SMIM11BQ8TCY0 68 aa5.24□□□□□ -1.57
CPNE4-208ENST00000511604 COL12A1Q99715 3063 aa5.24□□□□□ -1.57
CPNE4-208ENST00000511604 ORMDL1Q9P0S3 153 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms