RNA–Protein interactions for RNA: ENST00000511424.5

LIMCH1-212, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 3

Gene LIMCH1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-212ENST00000511424 CAMK2N1Q7Z7J9 78 aa1.64□□□□□ -2.15
LIMCH1-212ENST00000511424 SBSPONQ8IVN8 264 aa1.64□□□□□ -2.15
LIMCH1-212ENST00000511424 OR10J6PQ8NGY7 276 aa1.64□□□□□ -2.15
LIMCH1-212ENST00000511424 OR11H2Q8NH07 326 aa1.64□□□□□ -2.15
LIMCH1-212ENST00000511424 HIST1H2BHQ93079 126 aa1.64□□□□□ -2.15
LIMCH1-212ENST00000511424 HIST1H2BNQ99877 126 aa1.64□□□□□ -2.15
LIMCH1-212ENST00000511424 HIST1H2BMQ99879 126 aa1.64□□□□□ -2.15
LIMCH1-212ENST00000511424 MANBALQ9NQG1 85 aa1.64□□□□□ -2.15
LIMCH1-212ENST00000511424 TMEM167BQ9NRX6 74 aa1.64□□□□□ -2.15
LIMCH1-212ENST00000511424 KCNIP2Q9NS61 270 aa1.64□□□□□ -2.15
LIMCH1-212ENST00000511424 ZNF492Q9P255 531 aa1.64□□□□□ -2.15
LIMCH1-212ENST00000511424 UFC1Q9Y3C8 167 aa1.64□□□□□ -2.15
LIMCH1-212ENST00000511424 CSMD3Q7Z407 3707 aa1.64□□□□□ -2.15
LIMCH1-212ENST00000511424 FBN3Q75N90 2809 aa1.64□□□□□ -2.15
LIMCH1-212ENST00000511424 HYDINQ4G0P3 5121 aa1.64□□□□□ -2.15
LIMCH1-212ENST00000511424 LYSTQ99698 3801 aa1.64□□□□□ -2.15
LIMCH1-212ENST00000511424 TRAV26-2A0A0B4J265 109 aa1.63□□□□□ -2.15
LIMCH1-212ENST00000511424 PIGBOS1A0A0B4J2F0 54 aa1.63□□□□□ -2.15
LIMCH1-212ENST00000511424 PLAC8L1A1L4L8 177 aa1.63□□□□□ -2.15
LIMCH1-212ENST00000511424 H3BVH4 76 aa1.63□□□□□ -2.15
LIMCH1-212ENST00000511424 H7BYZ3 331 aa1.63□□□□□ -2.15
LIMCH1-212ENST00000511424 SNAI2O43623 268 aa1.63□□□□□ -2.15
LIMCH1-212ENST00000511424 NCR2O95944 276 aa1.63□□□□□ -2.15
LIMCH1-212ENST00000511424 ORM1P02763 201 aa1.63□□□□□ -2.15
LIMCH1-212ENST00000511424 TYMSP04818 313 aa1.63□□□□□ -2.15
LIMCH1-212ENST00000511424 RNASE3P12724 160 aaKnown RBP1.63□□□□□ -2.15
LIMCH1-212ENST00000511424 HLA-DRB4P13762 266 aa1.63□□□□□ -2.15
LIMCH1-212ENST00000511424 CXCL5P42830 114 aa1.63□□□□□ -2.15
LIMCH1-212ENST00000511424 GNG4P50150 75 aa1.63□□□□□ -2.15
LIMCH1-212ENST00000511424 EMP1P54849 157 aa1.63□□□□□ -2.15
LIMCH1-212ENST00000511424 TAS2R45P59539 299 aa1.63□□□□□ -2.15
LIMCH1-212ENST00000511424 HERVK_113P61574 105 aa1.63□□□□□ -2.15
LIMCH1-212ENST00000511424 CACNG7P62955 275 aa1.63□□□□□ -2.15
LIMCH1-212ENST00000511424 ELOBQ15370 118 aa1.63□□□□□ -2.15
LIMCH1-212ENST00000511424 DEFB135Q30KP9 77 aa1.63□□□□□ -2.15
LIMCH1-212ENST00000511424 C5orf47Q569G3 176 aa1.63□□□□□ -2.15
LIMCH1-212ENST00000511424 MORN3Q6PF18 240 aaPredicted RBP1.63□□□□□ -2.15
LIMCH1-212ENST00000511424 LYZL1Q6UWQ5 148 aa1.63□□□□□ -2.15
LIMCH1-212ENST00000511424 TEX43Q6ZNM6 134 aa1.63□□□□□ -2.15
LIMCH1-212ENST00000511424 NEGR1Q7Z3B1 354 aa1.63□□□□□ -2.15
LIMCH1-212ENST00000511424 MRPL55Q7Z7F7 128 aaKnown RBP1.63□□□□□ -2.15
LIMCH1-212ENST00000511424 TEX29Q8N6K0 151 aa1.63□□□□□ -2.15
LIMCH1-212ENST00000511424 C5orf17Q8NAS9 161 aa1.63□□□□□ -2.15
LIMCH1-212ENST00000511424 C11orf72Q8NBR9 251 aa1.63□□□□□ -2.15
LIMCH1-212ENST00000511424 NUP35Q8NFH5 326 aa1.63□□□□□ -2.15
LIMCH1-212ENST00000511424 OR10AG1Q8NH19 301 aa1.63□□□□□ -2.15
LIMCH1-212ENST00000511424 FAM104AQ969W3 186 aa1.63□□□□□ -2.15
LIMCH1-212ENST00000511424 SFRP2Q96HF1 295 aa1.63□□□□□ -2.15
LIMCH1-212ENST00000511424 MIEN1Q9BRT3 115 aa1.63□□□□□ -2.15
LIMCH1-212ENST00000511424 MRPL16Q9NX20 251 aaKnown RBP1.63□□□□□ -2.15
LIMCH1-212ENST00000511424 NAT8Q9UHE5 227 aa1.63□□□□□ -2.15
LIMCH1-212ENST00000511424 HLA-DRB4X5D2U9 266 aa1.63□□□□□ -2.15
LIMCH1-212ENST00000511424 STAB2Q8WWQ8 2551 aa1.62□□□□□ -2.15
LIMCH1-212ENST00000511424 A0A087WWC5 75 aa1.62□□□□□ -2.15
LIMCH1-212ENST00000511424 C7orf71A4D174 169 aa1.62□□□□□ -2.15
LIMCH1-212ENST00000511424 A8MTW9 85 aa1.62□□□□□ -2.15
LIMCH1-212ENST00000511424 C9JCJ5 164 aa1.62□□□□□ -2.15
LIMCH1-212ENST00000511424 TMEM250H0YL14 139 aa1.62□□□□□ -2.15
LIMCH1-212ENST00000511424 IFNA1P01562 189 aa1.62□□□□□ -2.15
LIMCH1-212ENST00000511424 GPX1P07203 203 aa1.62□□□□□ -2.15
LIMCH1-212ENST00000511424 IGLC6P0CF74 106 aa1.62□□□□□ -2.15
LIMCH1-212ENST00000511424 SMIM17P0DL12 118 aa1.62□□□□□ -2.15
LIMCH1-212ENST00000511424 FABP4P15090 132 aa1.62□□□□□ -2.15
LIMCH1-212ENST00000511424 EVI2AP22794 236 aa1.62□□□□□ -2.15
LIMCH1-212ENST00000511424 NDUFA6P56556 154 aa1.62□□□□□ -2.15
LIMCH1-212ENST00000511424 LINC00315P59091 139 aa1.62□□□□□ -2.15
LIMCH1-212ENST00000511424 UBE2G1P62253 170 aa1.62□□□□□ -2.15
LIMCH1-212ENST00000511424 PRR3P79522 188 aaKnown RBP1.62□□□□□ -2.15
LIMCH1-212ENST00000511424 PSG9Q00887 426 aa1.62□□□□□ -2.15
LIMCH1-212ENST00000511424 DEFB121Q5J5C9 76 aa1.62□□□□□ -2.15
LIMCH1-212ENST00000511424 Q6ZTI0 123 aa1.62□□□□□ -2.15
LIMCH1-212ENST00000511424 SPATA12Q7Z6I5 190 aa1.62□□□□□ -2.15
LIMCH1-212ENST00000511424 BOD1L2Q8IYS8 172 aa1.62□□□□□ -2.15
LIMCH1-212ENST00000511424 TMEM256Q8N2U0 113 aa1.62□□□□□ -2.15
LIMCH1-212ENST00000511424 CMTM2Q8TAZ6 248 aa1.62□□□□□ -2.15
LIMCH1-212ENST00000511424 FRZBQ92765 325 aa1.62□□□□□ -2.15
LIMCH1-212ENST00000511424 RPL39LQ96EH5 51 aaKnown RBP1.62□□□□□ -2.15
LIMCH1-212ENST00000511424 MRAP2Q96G30 205 aa1.62□□□□□ -2.15
LIMCH1-212ENST00000511424 DNAJC30Q96LL9 226 aa1.62□□□□□ -2.15
LIMCH1-212ENST00000511424 GPR82Q96P67 336 aa1.62□□□□□ -2.15
LIMCH1-212ENST00000511424 V9GYY9 64 aa1.62□□□□□ -2.15
LIMCH1-212ENST00000511424 ALMS1Q8TCU4 4167 aa1.62□□□□□ -2.15
LIMCH1-212ENST00000511424 FAT2Q9NYQ8 4349 aa1.62□□□□□ -2.15
LIMCH1-212ENST00000511424 DYNC1H1Q14204 4646 aaKnown RBP1.61□□□□□ -2.15
LIMCH1-212ENST00000511424 DNAH5Q8TE73 4624 aa1.61□□□□□ -2.15
LIMCH1-212ENST00000511424 DNAH8Q96JB1 4490 aa1.61□□□□□ -2.15
LIMCH1-212ENST00000511424 TRBV24-1A0A075B6N3 115 aa1.61□□□□□ -2.15
LIMCH1-212ENST00000511424 A0A096LPF7 62 aa1.61□□□□□ -2.15
LIMCH1-212ENST00000511424 TRBV6-1A0A0K0K1D8 114 aa1.61□□□□□ -2.15
LIMCH1-212ENST00000511424 LOC389332A0A1B0GUA5 103 aa1.61□□□□□ -2.15
LIMCH1-212ENST00000511424 A0A1B0GXF2 115 aa1.61□□□□□ -2.15
LIMCH1-212ENST00000511424 SMIM27A0A1W2PRY6 76 aa1.61□□□□□ -2.15
LIMCH1-212ENST00000511424 TMEM189A5PLL7 270 aa1.61□□□□□ -2.15
LIMCH1-212ENST00000511424 OR4C46A6NHA9 309 aa1.61□□□□□ -2.15
LIMCH1-212ENST00000511424 HIGD1CA8MV81 97 aa1.61□□□□□ -2.15
LIMCH1-212ENST00000511424 B4DEV8 164 aa1.61□□□□□ -2.15
LIMCH1-212ENST00000511424 M0QXV9 152 aa1.61□□□□□ -2.15
LIMCH1-212ENST00000511424 M0R381 172 aa1.61□□□□□ -2.15
LIMCH1-212ENST00000511424 PDE6DO43924 150 aa1.61□□□□□ -2.15
LIMCH1-212ENST00000511424 TRGC2P03986 189 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 348 ms