RNA–Protein interactions for RNA: ENST00000511125.1

SMAD1-209, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 3,293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-209ENST00000511125 UBE2D4Q9Y2X8 147 aa5.52□□□□□ -1.53
SMAD1-209ENST00000511125 BAALCQ8WXS3 180 aa5.52□□□□□ -1.53
SMAD1-209ENST00000511125 UBE2WQ96B02 151 aa5.52□□□□□ -1.53
SMAD1-209ENST00000511125 IGLV4-3A0A075B6K6 122 aa5.51□□□□□ -1.53
SMAD1-209ENST00000511125 HSPB8Q9UJY1 196 aa5.51□□□□□ -1.53
SMAD1-209ENST00000511125 TRAV8-6A0A0B4J262 113 aa5.51□□□□□ -1.53
SMAD1-209ENST00000511125 A0A0J9YXV3 536 aa5.51□□□□□ -1.53
SMAD1-209ENST00000511125 LY6G6CO95867 125 aa5.51□□□□□ -1.53
SMAD1-209ENST00000511125 ERASQ7Z444 233 aa5.51□□□□□ -1.53
SMAD1-209ENST00000511125 TMEM101Q96IK0 257 aa5.51□□□□□ -1.53
SMAD1-209ENST00000511125 MRPL35Q9NZE8 188 aaKnown RBP5.51□□□□□ -1.53
SMAD1-209ENST00000511125 APLNQ9ULZ1 77 aa5.51□□□□□ -1.53
SMAD1-209ENST00000511125 IGIPA6NJ69 53 aa5.5□□□□□ -1.53
SMAD1-209ENST00000511125 SYS1-DBNDD2H3BUS1 97 aa5.5□□□□□ -1.53
SMAD1-209ENST00000511125 XCL1P47992 114 aa5.5□□□□□ -1.53
SMAD1-209ENST00000511125 WWC2-AS2Q96NR7 200 aa5.5□□□□□ -1.53
SMAD1-209ENST00000511125 PYY3Q5JQD4 70 aa5.5□□□□□ -1.53
SMAD1-209ENST00000511125 LELP1Q5T871 98 aa5.5□□□□□ -1.53
SMAD1-209ENST00000511125 STPG4Q8N801 248 aa5.5□□□□□ -1.53
SMAD1-209ENST00000511125 hDV102S1A0JD36 115 aa5.5□□□□□ -1.53
SMAD1-209ENST00000511125 NUPR2A6NF83 97 aa5.5□□□□□ -1.53
SMAD1-209ENST00000511125 FAM104AQ969W3 186 aa5.5□□□□□ -1.53
SMAD1-209ENST00000511125 RPL32P62910 135 aaKnown RBP5.49□□□□□ -1.53
SMAD1-209ENST00000511125 TEX43Q6ZNM6 134 aa5.49□□□□□ -1.53
SMAD1-209ENST00000511125 TMEM141Q96I45 108 aa5.49□□□□□ -1.53
SMAD1-209ENST00000511125 TP73-AS1Q9UF72 201 aa5.49□□□□□ -1.53
SMAD1-209ENST00000511125 ATP5LO75964 103 aa5.49□□□□□ -1.53
SMAD1-209ENST00000511125 TMEM170BQ5T4T1 132 aa5.49□□□□□ -1.53
SMAD1-209ENST00000511125 ZNF664Q8N3J9 261 aa5.49□□□□□ -1.53
SMAD1-209ENST00000511125 C15orf53Q8NAA6 179 aa5.49□□□□□ -1.53
SMAD1-209ENST00000511125 Q9H8V8 135 aa5.49□□□□□ -1.53
SMAD1-209ENST00000511125 COX6A2Q02221 97 aa5.49□□□□□ -1.53
SMAD1-209ENST00000511125 C5orf38Q86SI9 138 aa5.49□□□□□ -1.53
SMAD1-209ENST00000511125 CDC42SE2Q9NRR3 84 aa5.49□□□□□ -1.53
SMAD1-209ENST00000511125 CHTOPQ9Y3Y2 248 aaKnown RBP5.49□□□□□ -1.53
SMAD1-209ENST00000511125 LECT2O14960 151 aa5.48□□□□□ -1.53
SMAD1-209ENST00000511125 CASC10Q5T4H9 136 aa5.48□□□□□ -1.53
SMAD1-209ENST00000511125 LINC00526Q96FQ7 95 aa5.48□□□□□ -1.53
SMAD1-209ENST00000511125 CST9LQ9H4G1 147 aa5.48□□□□□ -1.53
SMAD1-209ENST00000511125 PAM16Q9Y3D7 125 aa5.48□□□□□ -1.53
SMAD1-209ENST00000511125 KMT2AQ03164 3969 aa5.48□□□□□ -1.53
SMAD1-209ENST00000511125 LINC01546A6NGU7 62 aa5.48□□□□□ -1.53
SMAD1-209ENST00000511125 SIVA1O15304 175 aa5.48□□□□□ -1.53
SMAD1-209ENST00000511125 TTTY13Q9BZ97 58 aa5.48□□□□□ -1.53
SMAD1-209ENST00000511125 REG3AQ06141 175 aa5.47□□□□□ -1.53
SMAD1-209ENST00000511125 PMVKQ15126 192 aa5.47□□□□□ -1.53
SMAD1-209ENST00000511125 IGKV2D-24A0A075B6R9 120 aa5.47□□□□□ -1.53
SMAD1-209ENST00000511125 C11orf86A6NJI1 115 aa5.47□□□□□ -1.53
SMAD1-209ENST00000511125 H3BNG1 76 aa5.47□□□□□ -1.53
SMAD1-209ENST00000511125 CCL25O15444 150 aa5.47□□□□□ -1.53
SMAD1-209ENST00000511125 ODF1Q14990 250 aa5.47□□□□□ -1.53
SMAD1-209ENST00000511125 SH2D6Q7Z4S9 175 aa5.47□□□□□ -1.53
SMAD1-209ENST00000511125 LINC00469Q8N7U9 141 aa5.47□□□□□ -1.53
SMAD1-209ENST00000511125 PRO1933Q9H354 126 aa5.47□□□□□ -1.53
SMAD1-209ENST00000511125 DNAH10Q8IVF4 4471 aa5.47□□□□□ -1.53
SMAD1-209ENST00000511125 K7EMI3 77 aa5.46□□□□□ -1.54
SMAD1-209ENST00000511125 CRPP02741 224 aa5.46□□□□□ -1.54
SMAD1-209ENST00000511125 KRTAP1-5Q9BYS1 174 aa5.46□□□□□ -1.54
SMAD1-209ENST00000511125 GEMIN7Q9H840 131 aaKnown RBP5.46□□□□□ -1.54
SMAD1-209ENST00000511125 SPANXA1Q9NS26 97 aa5.46□□□□□ -1.54
SMAD1-209ENST00000511125 TOMM7Q9P0U1 55 aa5.46□□□□□ -1.54
SMAD1-209ENST00000511125 TRAV8-3A0A0A6YYJ7 113 aa5.46□□□□□ -1.54
SMAD1-209ENST00000511125 SPINK8P0C7L1 97 aa5.46□□□□□ -1.54
SMAD1-209ENST00000511125 TIMM17AQ99595 171 aa5.46□□□□□ -1.54
SMAD1-209ENST00000511125 CHAC1Q9BUX1 264 aa5.46□□□□□ -1.54
SMAD1-209ENST00000511125 PCP4L1A6NKN8 68 aa5.45□□□□□ -1.54
SMAD1-209ENST00000511125 G0S2P27469 103 aa5.45□□□□□ -1.54
SMAD1-209ENST00000511125 TMEM97Q5BJF2 176 aa5.45□□□□□ -1.54
SMAD1-209ENST00000511125 ENHOQ6UWT2 76 aa5.45□□□□□ -1.54
SMAD1-209ENST00000511125 C2orf88Q9BSF0 95 aa5.45□□□□□ -1.54
SMAD1-209ENST00000511125 C12orf57Q99622 126 aa5.45□□□□□ -1.54
SMAD1-209ENST00000511125 CDKN2A-AS1Q9UH64 79 aa5.45□□□□□ -1.54
SMAD1-209ENST00000511125 HYDINQ4G0P3 5121 aa5.45□□□□□ -1.54
SMAD1-209ENST00000511125 LINC00959A0A1B0GUT2 108 aa5.45□□□□□ -1.54
SMAD1-209ENST00000511125 FUSP35637 526 aaKnown RBP eCLIP5.45□□□□□ -1.54
SMAD1-209ENST00000511125 NMUP48645 174 aa5.45□□□□□ -1.54
SMAD1-209ENST00000511125 C20orf202A1L168 122 aa5.44□□□□□ -1.54
SMAD1-209ENST00000511125 IGKCP01834 107 aa5.44□□□□□ -1.54
SMAD1-209ENST00000511125 JOSD1Q15040 202 aaPredicted RBP5.44□□□□□ -1.54
SMAD1-209ENST00000511125 LINC00242Q5T6M2 205 aa5.44□□□□□ -1.54
SMAD1-209ENST00000511125 C14orf144Q96I85 54 aa5.44□□□□□ -1.54
SMAD1-209ENST00000511125 IGLV4-69A0A075B6H9 119 aa5.44□□□□□ -1.54
SMAD1-209ENST00000511125 PET117Q6UWS5 81 aa5.44□□□□□ -1.54
SMAD1-209ENST00000511125 CHCHD10Q8WYQ3 142 aaPredicted RBP5.44□□□□□ -1.54
SMAD1-209ENST00000511125 ZNF625Q96I27 306 aaPredicted RBP5.44□□□□□ -1.54
SMAD1-209ENST00000511125 MRPS16Q9Y3D3 137 aaKnown RBP5.44□□□□□ -1.54
SMAD1-209ENST00000511125 PYGO1Q9Y3Y4 419 aa5.44□□□□□ -1.54
SMAD1-209ENST00000511125 A0A0U1RRA0 63 aa5.43□□□□□ -1.54
SMAD1-209ENST00000511125 GAGE12HA6NDE8 117 aa5.43□□□□□ -1.54
SMAD1-209ENST00000511125 F8VRH5 84 aa5.43□□□□□ -1.54
SMAD1-209ENST00000511125 DPM2O94777 84 aa5.43□□□□□ -1.54
SMAD1-209ENST00000511125 MRPL52Q86TS9 123 aaKnown RBP5.43□□□□□ -1.54
SMAD1-209ENST00000511125 AMELXQ99217 191 aa5.43□□□□□ -1.54
SMAD1-209ENST00000511125 UBE2D1P51668 147 aa5.43□□□□□ -1.54
SMAD1-209ENST00000511125 ANKRD39Q53RE8 183 aa5.43□□□□□ -1.54
SMAD1-209ENST00000511125 LINC01545Q5VT33 79 aa5.43□□□□□ -1.54
SMAD1-209ENST00000511125 DNAH1Q9P2D7 4330 aa5.43□□□□□ -1.54
SMAD1-209ENST00000511125 SS18Q15532 418 aa5.43□□□□□ -1.54
SMAD1-209ENST00000511125 PAPPA-AS1Q5QFB9 102 aa5.43□□□□□ -1.54
SMAD1-209ENST00000511125 IGKV2D-26A0A0A0MRZ7 120 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 247.3 ms