RNA–Protein interactions for RNA: ENST00000511092.5

CLCN3-207, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-207ENST00000511092 FXYD6-FXYD2A0A087WZ82 144 aa3.7□□□□□ -1.82
CLCN3-207ENST00000511092 H7C1H1 209 aa3.7□□□□□ -1.82
CLCN3-207ENST00000511092 NDUFS6O75380 124 aaKnown RBP3.7□□□□□ -1.82
CLCN3-207ENST00000511092 RPS10P46783 165 aaKnown RBP3.7□□□□□ -1.82
CLCN3-207ENST00000511092 PRR3P79522 188 aaKnown RBP3.7□□□□□ -1.82
CLCN3-207ENST00000511092 CFAP161Q6P656 301 aa3.7□□□□□ -1.82
CLCN3-207ENST00000511092 C15orf56Q8N910 161 aa3.7□□□□□ -1.82
CLCN3-207ENST00000511092 GTSF1Q8WW33 167 aa3.7□□□□□ -1.82
CLCN3-207ENST00000511092 AP1S3Q96PC3 154 aa3.7□□□□□ -1.82
CLCN3-207ENST00000511092 TMEM243Q9BU79 118 aa3.7□□□□□ -1.82
CLCN3-207ENST00000511092 CTDSP1Q9GZU7 261 aa3.7□□□□□ -1.82
CLCN3-207ENST00000511092 CYTL1Q9NRR1 136 aa3.7□□□□□ -1.82
CLCN3-207ENST00000511092 IGKV2-24A0A0C4DH68 120 aa3.69□□□□□ -1.82
CLCN3-207ENST00000511092 MGPP08493 103 aa3.69□□□□□ -1.82
CLCN3-207ENST00000511092 NKX2-5P52952 324 aaPredicted RBP3.69□□□□□ -1.82
CLCN3-207ENST00000511092 MAJINQ3KP22 176 aa3.69□□□□□ -1.82
CLCN3-207ENST00000511092 TMUB2Q71RG4 321 aa3.69□□□□□ -1.82
CLCN3-207ENST00000511092 LYPD6BQ8NI32 183 aa3.69□□□□□ -1.82
CLCN3-207ENST00000511092 SFT2D1Q8WV19 159 aa3.69□□□□□ -1.82
CLCN3-207ENST00000511092 MBD3L1Q8WWY6 194 aa3.69□□□□□ -1.82
CLCN3-207ENST00000511092 PGLYRP4Q96LB8 373 aa3.69□□□□□ -1.82
CLCN3-207ENST00000511092 PAM16Q9Y3D7 125 aa3.69□□□□□ -1.82
CLCN3-207ENST00000511092 G3V3Q6 166 aa3.68□□□□□ -1.82
CLCN3-207ENST00000511092 UBE2L6O14933 153 aa3.68□□□□□ -1.82
CLCN3-207ENST00000511092 IGLC6P0CF74 106 aa3.68□□□□□ -1.82
CLCN3-207ENST00000511092 RPL35P42766 123 aaKnown RBP3.68□□□□□ -1.82
CLCN3-207ENST00000511092 SULT1A2P50226 295 aa3.68□□□□□ -1.82
CLCN3-207ENST00000511092 CACNG7P62955 275 aa3.68□□□□□ -1.82
CLCN3-207ENST00000511092 RASL11AQ6T310 242 aa3.68□□□□□ -1.82
CLCN3-207ENST00000511092 SPINK6Q6UWN8 80 aa3.68□□□□□ -1.82
CLCN3-207ENST00000511092 STPG4Q8N801 248 aa3.68□□□□□ -1.82
CLCN3-207ENST00000511092 FER1L6-AS1Q8NA97 138 aa3.68□□□□□ -1.82
CLCN3-207ENST00000511092 TPPP3Q9BW30 176 aa3.68□□□□□ -1.82
CLCN3-207ENST00000511092 NIT2Q9NQR4 276 aa3.68□□□□□ -1.82
CLCN3-207ENST00000511092 FLGP20930 4061 aaPredicted RBP3.67□□□□□ -1.82
CLCN3-207ENST00000511092 IGLV5-37A0A075B6J1 123 aa3.67□□□□□ -1.82
CLCN3-207ENST00000511092 A0A096LNI7 61 aa3.67□□□□□ -1.82
CLCN3-207ENST00000511092 GVQW2A0A096LPI5 108 aaPredicted RBP3.67□□□□□ -1.82
CLCN3-207ENST00000511092 IGKV3OR2-268A0A0C4DH90 116 aa3.67□□□□□ -1.82
CLCN3-207ENST00000511092 A0A1B0GV50 99 aa3.67□□□□□ -1.82
CLCN3-207ENST00000511092 ARPC5O15511 151 aa3.67□□□□□ -1.82
CLCN3-207ENST00000511092 RPS20P60866 119 aaKnown RBP3.67□□□□□ -1.82
CLCN3-207ENST00000511092 SRSF9Q13242 221 aaKnown RBP eCLIP3.67□□□□□ -1.82
CLCN3-207ENST00000511092 COTL1Q14019 142 aa3.67□□□□□ -1.82
CLCN3-207ENST00000511092 HIGD2BQ4VC39 106 aa3.67□□□□□ -1.82
CLCN3-207ENST00000511092 REG3GQ6UW15 175 aa3.67□□□□□ -1.82
CLCN3-207ENST00000511092 KCNRGQ8N5I3 272 aa3.67□□□□□ -1.82
CLCN3-207ENST00000511092 FAM213BQ8TBF2 198 aa3.67□□□□□ -1.82
CLCN3-207ENST00000511092 CHCHD10Q8WYQ3 142 aaPredicted RBP3.67□□□□□ -1.82
CLCN3-207ENST00000511092 KRTAP2-1Q9BYU5 128 aa3.67□□□□□ -1.82
CLCN3-207ENST00000511092 C19orf71A6NCJ1 209 aa3.66□□□□□ -1.82
CLCN3-207ENST00000511092 UMAD1C9J7I0 102 aa3.66□□□□□ -1.82
CLCN3-207ENST00000511092 F2Z2F3 143 aa3.66□□□□□ -1.82
CLCN3-207ENST00000511092 TRGC1P0CF51 173 aa3.66□□□□□ -1.82
CLCN3-207ENST00000511092 CRYGAP11844 174 aa3.66□□□□□ -1.82
CLCN3-207ENST00000511092 NTF3P20783 257 aa3.66□□□□□ -1.82
CLCN3-207ENST00000511092 OR2D3Q8NGH3 330 aa3.66□□□□□ -1.82
CLCN3-207ENST00000511092 LINC00474Q9P2X8 69 aa3.66□□□□□ -1.82
CLCN3-207ENST00000511092 XKRY2A2RUG3 117 aa3.65□□□□□ -1.83
CLCN3-207ENST00000511092 RAB19A4D1S5 217 aa3.65□□□□□ -1.83
CLCN3-207ENST00000511092 H7C423 109 aa3.65□□□□□ -1.83
CLCN3-207ENST00000511092 IFNA1P01562 189 aa3.65□□□□□ -1.83
CLCN3-207ENST00000511092 RAB14P61106 215 aa3.65□□□□□ -1.83
CLCN3-207ENST00000511092 ZNF345Q14585 488 aa3.65□□□□□ -1.83
CLCN3-207ENST00000511092 NDUFA5Q16718 116 aa3.65□□□□□ -1.83
CLCN3-207ENST00000511092 CENPWQ5EE01 88 aa3.65□□□□□ -1.83
CLCN3-207ENST00000511092 AMMECR1LQ6DCA0 310 aa3.65□□□□□ -1.83
CLCN3-207ENST00000511092 RNASEKQ6P5S7 137 aaKnown RBP3.65□□□□□ -1.83
CLCN3-207ENST00000511092 LYZL1Q6UWQ5 148 aa3.65□□□□□ -1.83
CLCN3-207ENST00000511092 Q6ZRP5 223 aa3.65□□□□□ -1.83
CLCN3-207ENST00000511092 C9orf62Q8N4C0 152 aa3.65□□□□□ -1.83
CLCN3-207ENST00000511092 C11orf52Q96A22 123 aa3.65□□□□□ -1.83
CLCN3-207ENST00000511092 TRAV26-2A0A0B4J265 109 aa3.64□□□□□ -1.83
CLCN3-207ENST00000511092 NCR2O95944 276 aa3.64□□□□□ -1.83
CLCN3-207ENST00000511092 CCL20P78556 96 aa3.64□□□□□ -1.83
CLCN3-207ENST00000511092 GATD1Q8NB37 220 aa3.64□□□□□ -1.83
CLCN3-207ENST00000511092 SMIM12Q96EX1 92 aa3.64□□□□□ -1.83
CLCN3-207ENST00000511092 LINC00526Q96FQ7 95 aa3.64□□□□□ -1.83
CLCN3-207ENST00000511092 CARD19Q96LW7 228 aa3.64□□□□□ -1.83
CLCN3-207ENST00000511092 CNFNQ9BYD5 112 aa3.64□□□□□ -1.83
CLCN3-207ENST00000511092 MANBALQ9NQG1 85 aa3.64□□□□□ -1.83
CLCN3-207ENST00000511092 PKIGQ9Y2B9 76 aa3.64□□□□□ -1.83
CLCN3-207ENST00000511092 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.63□□□□□ -1.83
CLCN3-207ENST00000511092 TRAV1-1A0A0B4J248 108 aa3.63□□□□□ -1.83
CLCN3-207ENST00000511092 IGHV1-58A0A0C4DH39 117 aa3.63□□□□□ -1.83
CLCN3-207ENST00000511092 IGKV2-29A2NJV5 120 aaPredicted RBP3.63□□□□□ -1.83
CLCN3-207ENST00000511092 SMLR1H3BR10 107 aa3.63□□□□□ -1.83
CLCN3-207ENST00000511092 APCSP02743 223 aa3.63□□□□□ -1.83
CLCN3-207ENST00000511092 FGF6P10767 208 aa3.63□□□□□ -1.83
CLCN3-207ENST00000511092 ZNF25P17030 456 aaPredicted RBP3.63□□□□□ -1.83
CLCN3-207ENST00000511092 CTRLP40313 264 aa3.63□□□□□ -1.83
CLCN3-207ENST00000511092 XCL1P47992 114 aa3.63□□□□□ -1.83
CLCN3-207ENST00000511092 GNG4P50150 75 aa3.63□□□□□ -1.83
CLCN3-207ENST00000511092 OR5A1Q8NGJ0 315 aa3.63□□□□□ -1.83
CLCN3-207ENST00000511092 RPL39LQ96EH5 51 aaKnown RBP3.63□□□□□ -1.83
CLCN3-207ENST00000511092 BIN3Q9NQY0 253 aa3.63□□□□□ -1.83
CLCN3-207ENST00000511092 GNG13Q9P2W3 67 aa3.63□□□□□ -1.83
CLCN3-207ENST00000511092 TRBV20OR9-2A0A075B6H5 130 aa3.62□□□□□ -1.83
CLCN3-207ENST00000511092 LINC00959A0A1B0GUT2 108 aa3.62□□□□□ -1.83
CLCN3-207ENST00000511092 KANTRA0A1W2PQU2 76 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms