RNA–Protein interactions for RNA: ENST00000509900.5

PTPN20-223, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

TSL 1 (best) BASIC

Gene PTPN20, Length 693 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-223	ENST00000509900	TNFRSF6B	O95407	300 aa		5.26	□□□□□ -1.57
PTPN20-223	ENST00000509900	OR5AL1	P0C617	328 aa		5.26	□□□□□ -1.57
PTPN20-223	ENST00000509900	TLX1NB	P0CAT3	122 aa		5.26	□□□□□ -1.57
PTPN20-223	ENST00000509900	MAL	P21145	153 aa		5.26	□□□□□ -1.57
PTPN20-223	ENST00000509900	GCHFR	P30047	84 aa		5.26	□□□□□ -1.57
PTPN20-223	ENST00000509900	RPL28	P46779	137 aa	Known RBP	5.26	□□□□□ -1.57
PTPN20-223	ENST00000509900	KRTAP10-7	P60409	375 aa	Predicted RBP	5.26	□□□□□ -1.57
PTPN20-223	ENST00000509900	OR2D3	Q8NGH3	330 aa		5.26	□□□□□ -1.57
PTPN20-223	ENST00000509900	IMMP2L	Q96T52	175 aa		5.26	□□□□□ -1.57
PTPN20-223	ENST00000509900	MRPL35	Q9NZE8	188 aa	Known RBP	5.26	□□□□□ -1.57
PTPN20-223	ENST00000509900	IGLV8-61	A0A075B6I0	122 aa		5.25	□□□□□ -1.57
PTPN20-223	ENST00000509900	IGKV2D-26	A0A0A0MRZ7	120 aa		5.25	□□□□□ -1.57
PTPN20-223	ENST00000509900		A0A1B0GVG6	124 aa		5.25	□□□□□ -1.57
PTPN20-223	ENST00000509900	COX7A2L	O14548	114 aa		5.25	□□□□□ -1.57
PTPN20-223	ENST00000509900	STAG3L2	P0CL84	134 aa		5.25	□□□□□ -1.57
PTPN20-223	ENST00000509900	STAG3L3	P0CL85	134 aa		5.25	□□□□□ -1.57
PTPN20-223	ENST00000509900	NTF3	P20783	257 aa		5.25	□□□□□ -1.57
PTPN20-223	ENST00000509900	PYDC2	Q56P42	97 aa		5.25	□□□□□ -1.57
PTPN20-223	ENST00000509900	C10orf25	Q5T742	122 aa		5.25	□□□□□ -1.57
PTPN20-223	ENST00000509900	SMDT1	Q9H4I9	107 aa		5.25	□□□□□ -1.57
PTPN20-223	ENST00000509900	NIT2	Q9NQR4	276 aa		5.25	□□□□□ -1.57
PTPN20-223	ENST00000509900		G3V3Q6	166 aa		5.24	□□□□□ -1.57
PTPN20-223	ENST00000509900		H7C423	109 aa		5.24	□□□□□ -1.57
PTPN20-223	ENST00000509900	PEX7	O00628	323 aa		5.24	□□□□□ -1.57
PTPN20-223	ENST00000509900	CXCL1	P09341	107 aa		5.24	□□□□□ -1.57
PTPN20-223	ENST00000509900	ZNF25	P17030	456 aa	Predicted RBP	5.24	□□□□□ -1.57
PTPN20-223	ENST00000509900	SPAG11B	Q08648	103 aa		5.24	□□□□□ -1.57
PTPN20-223	ENST00000509900	KRTAP20-1	Q3LI63	56 aa		5.24	□□□□□ -1.57
PTPN20-223	ENST00000509900	ZFP30	Q9Y2G7	519 aa		5.24	□□□□□ -1.57
PTPN20-223	ENST00000509900	CFC1	P0CG37	223 aa		5.23	□□□□□ -1.57
PTPN20-223	ENST00000509900	LRRC37A5P	Q49AS3	106 aa		5.23	□□□□□ -1.57
PTPN20-223	ENST00000509900	PCOTH	Q58A44	107 aa		5.23	□□□□□ -1.57
PTPN20-223	ENST00000509900	C9orf129	Q5T035	196 aa	Known RBP	5.23	□□□□□ -1.57
PTPN20-223	ENST00000509900	C6orf48	Q9UBA6	75 aa		5.23	□□□□□ -1.57
PTPN20-223	ENST00000509900		V9GYH0	126 aa		5.23	□□□□□ -1.57
PTPN20-223	ENST00000509900	BCE1	O60756	84 aa		5.22	□□□□□ -1.57
PTPN20-223	ENST00000509900	BTC	P35070	178 aa		5.22	□□□□□ -1.57
PTPN20-223	ENST00000509900	CDC34	P49427	236 aa	Predicted RBP	5.22	□□□□□ -1.57
PTPN20-223	ENST00000509900	C3orf22	Q8N5N4	141 aa		5.22	□□□□□ -1.57
PTPN20-223	ENST00000509900		A0A1W2PRE2	83 aa		5.21	□□□□□ -1.58
PTPN20-223	ENST00000509900	SPAG11A	Q6PDA7	123 aa		5.21	□□□□□ -1.58
PTPN20-223	ENST00000509900	C5orf38	Q86SI9	138 aa		5.21	□□□□□ -1.58
PTPN20-223	ENST00000509900	DAND5	Q8N907	189 aa		5.21	□□□□□ -1.58
PTPN20-223	ENST00000509900	SCGB1C1	Q8TD33	95 aa		5.21	□□□□□ -1.58
PTPN20-223	ENST00000509900	RAB24	Q969Q5	203 aa		5.21	□□□□□ -1.58
PTPN20-223	ENST00000509900	BTF3L4	Q96K17	158 aa		5.21	□□□□□ -1.58
PTPN20-223	ENST00000509900	UBE2D4	Q9Y2X8	147 aa		5.21	□□□□□ -1.58
PTPN20-223	ENST00000509900	NAP1L6	A6NFF2	107 aa		5.2	□□□□□ -1.58
PTPN20-223	ENST00000509900		H0YIZ8	118 aa		5.2	□□□□□ -1.58
PTPN20-223	ENST00000509900	NCR2	O95944	276 aa		5.2	□□□□□ -1.58
PTPN20-223	ENST00000509900	LTA	P01374	205 aa		5.2	□□□□□ -1.58
PTPN20-223	ENST00000509900	APCS	P02743	223 aa		5.2	□□□□□ -1.58
PTPN20-223	ENST00000509900	CTRL	P40313	264 aa		5.2	□□□□□ -1.58
PTPN20-223	ENST00000509900	UNQ6190/PRO20217	Q6UXQ8	127 aa		5.2	□□□□□ -1.58
PTPN20-223	ENST00000509900	COX6B2	Q6YFQ2	88 aa		5.2	□□□□□ -1.58
PTPN20-223	ENST00000509900	TMEM101	Q96IK0	257 aa		5.2	□□□□□ -1.58
PTPN20-223	ENST00000509900	CDC42SE2	Q9NRR3	84 aa		5.2	□□□□□ -1.58
PTPN20-223	ENST00000509900	TMEM167B	Q9NRX6	74 aa		5.2	□□□□□ -1.58
PTPN20-223	ENST00000509900	NEB	P20929	6669 aa		5.2	□□□□□ -1.58
PTPN20-223	ENST00000509900	NDUFA1	O15239	70 aa		5.19	□□□□□ -1.58
PTPN20-223	ENST00000509900	KRTAP13-1	Q8IUC0	172 aa		5.19	□□□□□ -1.58
PTPN20-223	ENST00000509900	KIR2DL4	Q99706	377 aa		5.19	□□□□□ -1.58
PTPN20-223	ENST00000509900	SEC22C	Q9BRL7	303 aa		5.19	□□□□□ -1.58
PTPN20-223	ENST00000509900	SMIM3	Q9BZL3	60 aa		5.19	□□□□□ -1.58
PTPN20-223	ENST00000509900	C22orf24	Q9Y442	160 aa		5.19	□□□□□ -1.58
PTPN20-223	ENST00000509900	C1orf196	B1AJZ1	125 aa		5.18	□□□□□ -1.58
PTPN20-223	ENST00000509900		F8WDY8	70 aa		5.18	□□□□□ -1.58
PTPN20-223	ENST00000509900	TMEM241	Q24JQ0	296 aa		5.18	□□□□□ -1.58
PTPN20-223	ENST00000509900	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	5.18	□□□□□ -1.58
PTPN20-223	ENST00000509900	OR10D4P	Q8NGN7	298 aa		5.18	□□□□□ -1.58
PTPN20-223	ENST00000509900	HIST1H2BA	Q96A08	127 aa		5.18	□□□□□ -1.58
PTPN20-223	ENST00000509900	FMC1	Q96HJ9	113 aa		5.18	□□□□□ -1.58
PTPN20-223	ENST00000509900	CXorf1	O96002	111 aa		5.17	□□□□□ -1.58
PTPN20-223	ENST00000509900	UBE2G2	P60604	165 aa		5.17	□□□□□ -1.58
PTPN20-223	ENST00000509900	UBE2G1	P62253	170 aa		5.17	□□□□□ -1.58
PTPN20-223	ENST00000509900	ORAOV1	Q8WV07	137 aa		5.17	□□□□□ -1.58
PTPN20-223	ENST00000509900	HSPB11	Q9Y547	144 aa		5.17	□□□□□ -1.58
PTPN20-223	ENST00000509900	ALG5	Q9Y673	324 aa		5.17	□□□□□ -1.58
PTPN20-223	ENST00000509900	KRTAP5-11	Q6L8G4	156 aa		5.16	□□□□□ -1.58
PTPN20-223	ENST00000509900	FAM74A7	A6NL05	159 aa		5.15	□□□□□ -1.59
PTPN20-223	ENST00000509900	NDUFC2-KCTD14	E9PQ53	114 aa		5.15	□□□□□ -1.59
PTPN20-223	ENST00000509900	LBH	Q53QV2	105 aa	Predicted RBP	5.15	□□□□□ -1.59
PTPN20-223	ENST00000509900	MRPL52	Q86TS9	123 aa	Known RBP	5.15	□□□□□ -1.59
PTPN20-223	ENST00000509900	GATD1	Q8NB37	220 aa		5.15	□□□□□ -1.59
PTPN20-223	ENST00000509900	RPL39L	Q96EH5	51 aa	Known RBP	5.15	□□□□□ -1.59
PTPN20-223	ENST00000509900	KRTAP2-2	Q9BYT5	123 aa		5.15	□□□□□ -1.59
PTPN20-223	ENST00000509900	IGLC6	P0CF74	106 aa		5.14	□□□□□ -1.59
PTPN20-223	ENST00000509900	RNASE13	Q5GAN3	156 aa	Known RBP	5.14	□□□□□ -1.59
PTPN20-223	ENST00000509900	TRAV13-1	A0A0B4J241	112 aa		5.13	□□□□□ -1.59
PTPN20-223	ENST00000509900	SDHAF1	A6NFY7	115 aa		5.13	□□□□□ -1.59
PTPN20-223	ENST00000509900	SIX6	O95475	246 aa		5.13	□□□□□ -1.59
PTPN20-223	ENST00000509900	DEFA1	P59665	94 aa		5.13	□□□□□ -1.59
PTPN20-223	ENST00000509900	PACRG	Q96M98	296 aa	Predicted RBP	5.13	□□□□□ -1.59
PTPN20-223	ENST00000509900	TPPP3	Q9BW30	176 aa		5.13	□□□□□ -1.59
PTPN20-223	ENST00000509900	RPL37AP8	A6NKH3	93 aa		5.12	□□□□□ -1.59
PTPN20-223	ENST00000509900	ATP6V1G2	O95670	118 aa		5.12	□□□□□ -1.59
PTPN20-223	ENST00000509900	TRGC1	P0CF51	173 aa		5.12	□□□□□ -1.59
PTPN20-223	ENST00000509900	UBE2A	P49459	152 aa		5.12	□□□□□ -1.59
PTPN20-223	ENST00000509900	CNPY1	Q3B7I2	92 aa		5.12	□□□□□ -1.59
PTPN20-223	ENST00000509900	KRTAP19-6	Q3LI70	58 aa		5.12	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms