RNA–Protein interactions for RNA: ENST00000509712.5

CCDC30-213, Transcript of coiled-coil domain containing 30, humanhuman

TSL 2

Gene CCDC30, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-213ENST00000509712 BPY2O14599 106 aa3.4□□□□□ -1.87
CCDC30-213ENST00000509712 CDK2AP2O75956 126 aa3.4□□□□□ -1.87
CCDC30-213ENST00000509712 ZNF32P17041 273 aa3.4□□□□□ -1.87
CCDC30-213ENST00000509712 LINC01547P58512 204 aaPredicted RBP3.4□□□□□ -1.87
CCDC30-213ENST00000509712 BSPH1Q075Z2 132 aa3.4□□□□□ -1.87
CCDC30-213ENST00000509712 KRTAP5-1Q6L8H4 278 aa3.4□□□□□ -1.87
CCDC30-213ENST00000509712 RETNLBQ9BQ08 111 aa3.4□□□□□ -1.87
CCDC30-213ENST00000509712 Q9BRP9 147 aa3.4□□□□□ -1.87
CCDC30-213ENST00000509712 DSCAMO60469 2012 aa3.4□□□□□ -1.87
CCDC30-213ENST00000509712 TNRC6BQ9UPQ9 1833 aaKnown RBP3.4□□□□□ -1.87
CCDC30-213ENST00000509712 FREM1Q5H8C1 2179 aa3.4□□□□□ -1.87
CCDC30-213ENST00000509712 CACNA1DQ01668 2161 aa3.39□□□□□ -1.87
CCDC30-213ENST00000509712 LOC110117498A0A087WWA1 95 aa3.39□□□□□ -1.87
CCDC30-213ENST00000509712 TRAV21A0A0B4J279 112 aa3.39□□□□□ -1.87
CCDC30-213ENST00000509712 LY6HO94772 140 aa3.39□□□□□ -1.87
CCDC30-213ENST00000509712 IGHV3-30-3P0DP02 117 aa3.39□□□□□ -1.87
CCDC30-213ENST00000509712 FAM27BQ5VT28 67 aa3.39□□□□□ -1.87
CCDC30-213ENST00000509712 LINC00467Q9BRT7 94 aa3.39□□□□□ -1.87
CCDC30-213ENST00000509712 OCR1Q9BZK8 76 aa3.39□□□□□ -1.87
CCDC30-213ENST00000509712 A0A087WYN8 130 aa3.38□□□□□ -1.87
CCDC30-213ENST00000509712 KRTAP24-1Q3LI83 254 aa3.38□□□□□ -1.87
CCDC30-213ENST00000509712 WFDC9Q8NEX5 89 aa3.38□□□□□ -1.87
CCDC30-213ENST00000509712 LINC00167Q96N53 147 aa3.38□□□□□ -1.87
CCDC30-213ENST00000509712 ARFGEF3Q5TH69 2177 aa3.38□□□□□ -1.87
CCDC30-213ENST00000509712 IGKV1D-37A0A075B6S9 117 aa3.38□□□□□ -1.87
CCDC30-213ENST00000509712 A0A087WW49 117 aa3.38□□□□□ -1.87
CCDC30-213ENST00000509712 IGLV9-49A0A0B4J1Y8 123 aa3.38□□□□□ -1.87
CCDC30-213ENST00000509712 IGHV1-18A0A0C4DH31 117 aa3.38□□□□□ -1.87
CCDC30-213ENST00000509712 NDUFA1O15239 70 aa3.38□□□□□ -1.87
CCDC30-213ENST00000509712 GAS8-AS1O95177 125 aa3.38□□□□□ -1.87
CCDC30-213ENST00000509712 DEFB134Q4QY38 66 aa3.38□□□□□ -1.87
CCDC30-213ENST00000509712 MIR7-3HGQ8N6C7 128 aa3.38□□□□□ -1.87
CCDC30-213ENST00000509712 LINC00308Q8TCZ7 52 aa3.38□□□□□ -1.87
CCDC30-213ENST00000509712 ALPK2Q86TB3 2170 aa3.37□□□□□ -1.87
CCDC30-213ENST00000509712 IGHV3-72A0A0B4J1Y9 119 aa3.37□□□□□ -1.87
CCDC30-213ENST00000509712 A8MU10 97 aa3.37□□□□□ -1.87
CCDC30-213ENST00000509712 DEFB114Q30KQ6 69 aa3.37□□□□□ -1.87
CCDC30-213ENST00000509712 SPANXA2-OT1Q8N9U9 137 aa3.37□□□□□ -1.87
CCDC30-213ENST00000509712 FAM218AQ96MZ4 157 aa3.37□□□□□ -1.87
CCDC30-213ENST00000509712 PRR15LQ9BU68 103 aa3.37□□□□□ -1.87
CCDC30-213ENST00000509712 TET2Q6N021 2002 aaPredicted RBP3.36□□□□□ -1.87
CCDC30-213ENST00000509712 ARHGAP32A7KAX9 2087 aa3.36□□□□□ -1.87
CCDC30-213ENST00000509712 IGHV1OR15-1A0A075B7D0 117 aa3.36□□□□□ -1.87
CCDC30-213ENST00000509712 IGKV3D-20A0A0C4DH25 116 aa3.36□□□□□ -1.87
CCDC30-213ENST00000509712 IGHV4-61A0A0C4DH41 118 aa3.36□□□□□ -1.87
CCDC30-213ENST00000509712 TRBV6-5A0A0K0K1A5 114 aa3.36□□□□□ -1.87
CCDC30-213ENST00000509712 PINLYPA6NC86 204 aa3.36□□□□□ -1.87
CCDC30-213ENST00000509712 ATP6V0E1O15342 81 aa3.36□□□□□ -1.87
CCDC30-213ENST00000509712 IGLV1-51P01701 117 aa3.36□□□□□ -1.87
CCDC30-213ENST00000509712 IGHV4-59P01825 116 aa3.36□□□□□ -1.87
CCDC30-213ENST00000509712 HCP5Q6MZN7 132 aa3.36□□□□□ -1.87
CCDC30-213ENST00000509712 Q8N814 137 aa3.36□□□□□ -1.87
CCDC30-213ENST00000509712 ZCCHC13Q8WW36 166 aaKnown RBP3.36□□□□□ -1.87
CCDC30-213ENST00000509712 S4R3C0 116 aa3.36□□□□□ -1.87
CCDC30-213ENST00000509712 UNC13CQ8NB66 2214 aa3.36□□□□□ -1.87
CCDC30-213ENST00000509712 COL4A5P29400 1685 aa3.36□□□□□ -1.87
CCDC30-213ENST00000509712 EP400Q96L91 3159 aa3.36□□□□□ -1.87
CCDC30-213ENST00000509712 SMIM1B2RUZ4 78 aa3.35□□□□□ -1.87
CCDC30-213ENST00000509712 NCR3O14931 201 aa3.35□□□□□ -1.87
CCDC30-213ENST00000509712 CRPP02741 224 aa3.35□□□□□ -1.87
CCDC30-213ENST00000509712 DEFB132Q7Z7B7 95 aa3.35□□□□□ -1.87
CCDC30-213ENST00000509712 NDUFA4L2Q9NRX3 87 aa3.35□□□□□ -1.87
CCDC30-213ENST00000509712 MUC22E2RYF6 1773 aaPredicted RBP3.35□□□□□ -1.87
CCDC30-213ENST00000509712 DSCAML1Q8TD84 2053 aa3.35□□□□□ -1.87
CCDC30-213ENST00000509712 ZGRF1Q86YA3 2104 aa3.35□□□□□ -1.87
CCDC30-213ENST00000509712 USF3Q68DE3 2245 aa3.34□□□□□ -1.87
CCDC30-213ENST00000509712 TRBV10-1A0A0K0K1A3 114 aa3.34□□□□□ -1.87
CCDC30-213ENST00000509712 IGHV3-43DP0DP04 118 aa3.34□□□□□ -1.87
CCDC30-213ENST00000509712 POLR2KP53803 58 aaKnown RBP3.34□□□□□ -1.87
CCDC30-213ENST00000509712 HAMPP81172 84 aa3.34□□□□□ -1.87
CCDC30-213ENST00000509712 C9orf66Q5T8R8 295 aa3.34□□□□□ -1.87
CCDC30-213ENST00000509712 SND1-IT1Q9HBX3 110 aa3.34□□□□□ -1.87
CCDC30-213ENST00000509712 KNTC1P50748 2209 aa3.34□□□□□ -1.88
CCDC30-213ENST00000509712 LRCOL1A6NCL2 159 aa3.34□□□□□ -1.88
CCDC30-213ENST00000509712 H3BRN7 92 aa3.34□□□□□ -1.88
CCDC30-213ENST00000509712 PRB4P10163 310 aaPredicted RBP3.34□□□□□ -1.88
CCDC30-213ENST00000509712 CCL5P13501 91 aa3.34□□□□□ -1.88
CCDC30-213ENST00000509712 Q6ZQT0 140 aa3.34□□□□□ -1.88
CCDC30-213ENST00000509712 COX14Q96I36 57 aa3.34□□□□□ -1.88
CCDC30-213ENST00000509712 B9D2Q9BPU9 175 aa3.34□□□□□ -1.88
CCDC30-213ENST00000509712 PI4KAP42356 2102 aa3.33□□□□□ -1.88
CCDC30-213ENST00000509712 IGHV7-4-1A0A0J9YVY3 117 aa3.33□□□□□ -1.88
CCDC30-213ENST00000509712 STATHP02808 62 aa3.33□□□□□ -1.88
CCDC30-213ENST00000509712 NDPQ00604 133 aa3.33□□□□□ -1.88
CCDC30-213ENST00000509712 C9orf129Q5T035 196 aaKnown RBP3.33□□□□□ -1.88
CCDC30-213ENST00000509712 LINC00208Q96KT6 92 aa3.33□□□□□ -1.88
CCDC30-213ENST00000509712 HIGD2AQ9BW72 106 aa3.33□□□□□ -1.88
CCDC30-213ENST00000509712 KLK9Q9UKQ9 250 aa3.33□□□□□ -1.88
CCDC30-213ENST00000509712 LINC01558Q9Y6Z2 57 aa3.33□□□□□ -1.88
CCDC30-213ENST00000509712 LY6G6DO95868 133 aa3.32□□□□□ -1.88
CCDC30-213ENST00000509712 CLPSP04118 112 aa3.32□□□□□ -1.88
CCDC30-213ENST00000509712 CNBPP62633 177 aaKnown RBP3.32□□□□□ -1.88
CCDC30-213ENST00000509712 C20orf203Q8NBC4 194 aa3.32□□□□□ -1.88
CCDC30-213ENST00000509712 KRTAP4-4Q9BYR3 166 aa3.32□□□□□ -1.88
CCDC30-213ENST00000509712 MUC4Q99102 2169 aa3.32□□□□□ -1.88
CCDC30-213ENST00000509712 IGHV3OR16-12A0A075B7B8 117 aa3.31□□□□□ -1.88
CCDC30-213ENST00000509712 IGHV3-73A0A0B4J1V6 119 aa3.31□□□□□ -1.88
CCDC30-213ENST00000509712 IGHV3-35A0A0C4DH35 117 aa3.31□□□□□ -1.88
CCDC30-213ENST00000509712 IGKV2-29A2NJV5 120 aaPredicted RBP3.31□□□□□ -1.88
CCDC30-213ENST00000509712 KRTAP16-1A8MUX0 517 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms