RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 FGF6P10767 208 aa9.83□□□□□ -0.84
CXCL1-202ENST00000509101 GATD1Q8NB37 220 aa9.83□□□□□ -0.84
CXCL1-202ENST00000509101 CCL25O15444 150 aa9.82□□□□□ -0.84
CXCL1-202ENST00000509101 OR5A1Q8NGJ0 315 aa9.82□□□□□ -0.84
CXCL1-202ENST00000509101 RPL39LQ96EH5 51 aaKnown RBP9.82□□□□□ -0.84
CXCL1-202ENST00000509101 NCR2O95944 276 aa9.81□□□□□ -0.84
CXCL1-202ENST00000509101 PTTG1IPP53801 180 aa9.81□□□□□ -0.84
CXCL1-202ENST00000509101 SYCNQ0VAF6 134 aa9.81□□□□□ -0.84
CXCL1-202ENST00000509101 GAGE2BQ13066 116 aa9.81□□□□□ -0.84
CXCL1-202ENST00000509101 CNFNQ9BYD5 112 aa9.81□□□□□ -0.84
CXCL1-202ENST00000509101 H7C423 109 aa9.8□□□□□ -0.84
CXCL1-202ENST00000509101 FOXA3P55318 350 aaPredicted RBP9.8□□□□□ -0.84
CXCL1-202ENST00000509101 RPL23P62829 140 aaKnown RBP9.8□□□□□ -0.84
CXCL1-202ENST00000509101 PEA15Q15121 130 aa9.8□□□□□ -0.84
CXCL1-202ENST00000509101 TWIST1Q15672 202 aa9.8□□□□□ -0.84
CXCL1-202ENST00000509101 LINC00959A0A1B0GUT2 108 aa9.79□□□□□ -0.84
CXCL1-202ENST00000509101 A8MWL6 223 aa9.79□□□□□ -0.84
CXCL1-202ENST00000509101 ZNF561-AS1K7EIQ3 104 aa9.79□□□□□ -0.84
CXCL1-202ENST00000509101 ZNF25P17030 456 aaPredicted RBP9.79□□□□□ -0.84
CXCL1-202ENST00000509101 TMEM241Q24JQ0 296 aa9.79□□□□□ -0.84
CXCL1-202ENST00000509101 ISOC2Q96AB3 205 aa9.79□□□□□ -0.84
CXCL1-202ENST00000509101 OSTCQ9NRP0 149 aa9.79□□□□□ -0.84
CXCL1-202ENST00000509101 PSORS1C2Q9UIG4 136 aa9.79□□□□□ -0.84
CXCL1-202ENST00000509101 LOC107984640A0A0U1RRK4 108 aa9.78□□□□□ -0.84
CXCL1-202ENST00000509101 A0A1W2PNN7 141 aa9.78□□□□□ -0.84
CXCL1-202ENST00000509101 MT-ND6P03923 174 aa9.78□□□□□ -0.84
CXCL1-202ENST00000509101 CAMPP49913 170 aa9.78□□□□□ -0.84
CXCL1-202ENST00000509101 FAM74A3Q4VXF1 159 aa9.78□□□□□ -0.84
CXCL1-202ENST00000509101 CT83Q5H943 113 aa9.78□□□□□ -0.84
CXCL1-202ENST00000509101 TMEM101Q96IK0 257 aa9.78□□□□□ -0.84
CXCL1-202ENST00000509101 BTF3L4Q96K17 158 aa9.78□□□□□ -0.84
CXCL1-202ENST00000509101 V9GYV3 84 aa9.78□□□□□ -0.84
CXCL1-202ENST00000509101 MUC2Q02817 5179 aa9.77□□□□□ -0.84
CXCL1-202ENST00000509101 SDHAF1A6NFY7 115 aa9.77□□□□□ -0.85
CXCL1-202ENST00000509101 ZNF664Q8N3J9 261 aa9.77□□□□□ -0.85
CXCL1-202ENST00000509101 TSKUQ8WUA8 353 aa9.77□□□□□ -0.85
CXCL1-202ENST00000509101 NAT8Q9UHE5 227 aa9.77□□□□□ -0.85
CXCL1-202ENST00000509101 IFITM2Q01629 132 aa9.76□□□□□ -0.85
CXCL1-202ENST00000509101 ADIRFQ15847 76 aa9.76□□□□□ -0.85
CXCL1-202ENST00000509101 C1orf137Q5JT78 98 aa9.76□□□□□ -0.85
CXCL1-202ENST00000509101 PRR26Q8N8Z3 221 aa9.76□□□□□ -0.85
CXCL1-202ENST00000509101 SMDT1Q9H4I9 107 aa9.76□□□□□ -0.85
CXCL1-202ENST00000509101 HIGD1CA8MV81 97 aa9.75□□□□□ -0.85
CXCL1-202ENST00000509101 SS18Q15532 418 aa9.75□□□□□ -0.85
CXCL1-202ENST00000509101 IGLV4-69A0A075B6H9 119 aa9.74□□□□□ -0.85
CXCL1-202ENST00000509101 PMCHP20382 165 aa9.74□□□□□ -0.85
CXCL1-202ENST00000509101 C9orf116Q5BN46 136 aaPredicted RBP9.74□□□□□ -0.85
CXCL1-202ENST00000509101 CD164L2Q6UWJ8 174 aa9.74□□□□□ -0.85
CXCL1-202ENST00000509101 I3L3M4 83 aa9.73□□□□□ -0.85
CXCL1-202ENST00000509101 RPL18AQ02543 176 aaKnown RBP9.73□□□□□ -0.85
CXCL1-202ENST00000509101 PHF5AQ7RTV0 110 aaKnown RBP9.73□□□□□ -0.85
CXCL1-202ENST00000509101 SMIM15Q7Z3B0 74 aa9.73□□□□□ -0.85
CXCL1-202ENST00000509101 NUP35Q8NFH5 326 aa9.73□□□□□ -0.85
CXCL1-202ENST00000509101 TMEM242Q9NWH2 141 aa9.73□□□□□ -0.85
CXCL1-202ENST00000509101 A0A1B0GUT8 65 aa9.72□□□□□ -0.85
CXCL1-202ENST00000509101 APOMO95445 188 aa9.72□□□□□ -0.85
CXCL1-202ENST00000509101 RAB14P61106 215 aa9.72□□□□□ -0.85
CXCL1-202ENST00000509101 MRAP2Q96G30 205 aa9.72□□□□□ -0.85
CXCL1-202ENST00000509101 CAMK2N2Q96S95 79 aa9.72□□□□□ -0.85
CXCL1-202ENST00000509101 KRTAP9-2Q9BYQ4 174 aa9.72□□□□□ -0.85
CXCL1-202ENST00000509101 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.71□□□□□ -0.86
CXCL1-202ENST00000509101 TSHBP01222 138 aa9.71□□□□□ -0.86
CXCL1-202ENST00000509101 ESDP10768 282 aa9.71□□□□□ -0.86
CXCL1-202ENST00000509101 MALP21145 153 aa9.71□□□□□ -0.86
CXCL1-202ENST00000509101 CLLU1Q5K131 121 aa9.71□□□□□ -0.86
CXCL1-202ENST00000509101 BORCS7Q96B45 105 aa9.71□□□□□ -0.86
CXCL1-202ENST00000509101 CDC42SE2Q9NRR3 84 aa9.71□□□□□ -0.86
CXCL1-202ENST00000509101 DIRC1Q969H9 104 aa9.7□□□□□ -0.86
CXCL1-202ENST00000509101 TRBV6-5A0A0K0K1A5 114 aa9.69□□□□□ -0.86
CXCL1-202ENST00000509101 SMIM27A0A1W2PRY6 76 aa9.69□□□□□ -0.86
CXCL1-202ENST00000509101 COX7A2LO14548 114 aa9.69□□□□□ -0.86
CXCL1-202ENST00000509101 IGLV7-43P04211 117 aa9.69□□□□□ -0.86
CXCL1-202ENST00000509101 MRPL52Q86TS9 123 aaKnown RBP9.69□□□□□ -0.86
CXCL1-202ENST00000509101 TMEM191AQ9H0A3 160 aa9.69□□□□□ -0.86
CXCL1-202ENST00000509101 NAT8BQ9UHF3 227 aa9.69□□□□□ -0.86
CXCL1-202ENST00000509101 RAB4AP20338 218 aa9.68□□□□□ -0.86
CXCL1-202ENST00000509101 AMN1Q8IY45 258 aa9.68□□□□□ -0.86
CXCL1-202ENST00000509101 OPRPNQ99935 248 aaPredicted RBP9.68□□□□□ -0.86
CXCL1-202ENST00000509101 ST20Q9HBF5 79 aa9.68□□□□□ -0.86
CXCL1-202ENST00000509101 C7orf77A4D0Y5 90 aa9.67□□□□□ -0.86
CXCL1-202ENST00000509101 H0Y9J4 135 aa9.67□□□□□ -0.86
CXCL1-202ENST00000509101 RIGQ13278 110 aa9.67□□□□□ -0.86
CXCL1-202ENST00000509101 PRR4Q16378 134 aa9.67□□□□□ -0.86
CXCL1-202ENST00000509101 SMKR1H3BMG3 65 aa9.66□□□□□ -0.86
CXCL1-202ENST00000509101 RNASE13Q5GAN3 156 aaKnown RBP9.66□□□□□ -0.86
CXCL1-202ENST00000509101 C2orf48Q96LS8 159 aa9.66□□□□□ -0.86
CXCL1-202ENST00000509101 A0A0U1RQV1 116 aa9.65□□□□□ -0.86
CXCL1-202ENST00000509101 C1orf196B1AJZ1 125 aa9.65□□□□□ -0.86
CXCL1-202ENST00000509101 SPAG11BQ08648 103 aa9.65□□□□□ -0.86
CXCL1-202ENST00000509101 IGLV1-50A0A075B6I6 118 aa9.64□□□□□ -0.87
CXCL1-202ENST00000509101 A0A087WZ39 114 aa9.64□□□□□ -0.87
CXCL1-202ENST00000509101 C5orf38Q86SI9 138 aa9.64□□□□□ -0.87
CXCL1-202ENST00000509101 KRTAP11-1Q8IUC1 163 aa9.64□□□□□ -0.87
CXCL1-202ENST00000509101 TRAV13-1A0A0B4J241 112 aa9.63□□□□□ -0.87
CXCL1-202ENST00000509101 KRTAP1-4P0C5Y4 121 aa9.63□□□□□ -0.87
CXCL1-202ENST00000509101 ADCYAP1P18509 176 aa9.63□□□□□ -0.87
CXCL1-202ENST00000509101 POLR2KP53803 58 aaKnown RBP9.63□□□□□ -0.87
CXCL1-202ENST00000509101 MRPL54Q6P161 138 aaKnown RBP9.63□□□□□ -0.87
CXCL1-202ENST00000509101 FAT4Q6V0I7 4981 aa9.63□□□□□ -0.87
CXCL1-202ENST00000509101 TRBV27A0A0K0K1C4 114 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms