RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 F6UB75 175 aa7.27□□□□□ -1.25
PDGFRA-207ENST00000509092 KLKP1Q107X0 134 aa7.27□□□□□ -1.25
PDGFRA-207ENST00000509092 CDSNQ15517 529 aa7.27□□□□□ -1.25
PDGFRA-207ENST00000509092 ECSCRQ19T08 205 aa7.27□□□□□ -1.25
PDGFRA-207ENST00000509092 CDKN2A-AS1Q9UH64 79 aa7.27□□□□□ -1.25
PDGFRA-207ENST00000509092 A0A087WYN8 130 aa7.26□□□□□ -1.25
PDGFRA-207ENST00000509092 IGHV3-16A0A0C4DH30 117 aa7.26□□□□□ -1.25
PDGFRA-207ENST00000509092 TRBV10-3A0A0K0K1G6 114 aa7.26□□□□□ -1.25
PDGFRA-207ENST00000509092 CCKP06307 115 aa7.26□□□□□ -1.25
PDGFRA-207ENST00000509092 FDCSPQ8NFU4 85 aa7.26□□□□□ -1.25
PDGFRA-207ENST00000509092 ABCA4P78363 2273 aa7.26□□□□□ -1.25
PDGFRA-207ENST00000509092 ACACBO00763 2458 aa7.26□□□□□ -1.25
PDGFRA-207ENST00000509092 IGLV5-39A0A0G2JS06 123 aa7.26□□□□□ -1.25
PDGFRA-207ENST00000509092 A0A0U1RRA0 63 aa7.26□□□□□ -1.25
PDGFRA-207ENST00000509092 ODF3BA8MYP8 253 aa7.26□□□□□ -1.25
PDGFRA-207ENST00000509092 ZNF625Q96I27 306 aaPredicted RBP7.26□□□□□ -1.25
PDGFRA-207ENST00000509092 CRPP02741 224 aa7.25□□□□□ -1.25
PDGFRA-207ENST00000509092 FAM19A1Q7Z5A9 133 aa7.25□□□□□ -1.25
PDGFRA-207ENST00000509092 NCR3O14931 201 aa7.25□□□□□ -1.25
PDGFRA-207ENST00000509092 WFDC9Q8NEX5 89 aa7.25□□□□□ -1.25
PDGFRA-207ENST00000509092 TLN1Q9Y490 2541 aaKnown RBP7.24□□□□□ -1.25
PDGFRA-207ENST00000509092 H0YGX0 51 aa7.24□□□□□ -1.25
PDGFRA-207ENST00000509092 ATP5EP56381 51 aaPredicted RBP7.24□□□□□ -1.25
PDGFRA-207ENST00000509092 BSPH1Q075Z2 132 aa7.24□□□□□ -1.25
PDGFRA-207ENST00000509092 Q8N9W7 124 aa7.24□□□□□ -1.25
PDGFRA-207ENST00000509092 TRBV7-6A0A0J9YX20 115 aa7.23□□□□□ -1.25
PDGFRA-207ENST00000509092 ENHOQ6UWT2 76 aa7.23□□□□□ -1.25
PDGFRA-207ENST00000509092 FAM215AQ9Y5M1 114 aa7.23□□□□□ -1.25
PDGFRA-207ENST00000509092 SPENQ96T58 3664 aaKnown RBP7.23□□□□□ -1.25
PDGFRA-207ENST00000509092 ATP6V0E1O15342 81 aa7.23□□□□□ -1.25
PDGFRA-207ENST00000509092 LINC00474Q9P2X8 69 aa7.23□□□□□ -1.25
PDGFRA-207ENST00000509092 MINOS1Q5TGZ0 78 aa7.22□□□□□ -1.25
PDGFRA-207ENST00000509092 IGFL2Q6UWQ7 119 aa7.22□□□□□ -1.25
PDGFRA-207ENST00000509092 CHCHD7Q9BUK0 85 aa7.22□□□□□ -1.25
PDGFRA-207ENST00000509092 SPTA1P02549 2419 aa7.22□□□□□ -1.25
PDGFRA-207ENST00000509092 POLEQ07864 2286 aa7.22□□□□□ -1.25
PDGFRA-207ENST00000509092 RBM3P98179 157 aaKnown RBP7.22□□□□□ -1.25
PDGFRA-207ENST00000509092 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.22□□□□□ -1.25
PDGFRA-207ENST00000509092 BSNQ9UPA5 3926 aa7.22□□□□□ -1.25
PDGFRA-207ENST00000509092 PKD1L2Q7Z442 2459 aa7.22□□□□□ -1.25
PDGFRA-207ENST00000509092 F8WEM9 126 aa7.21□□□□□ -1.25
PDGFRA-207ENST00000509092 PIK3CD-AS1Q5SR53 167 aa7.21□□□□□ -1.25
PDGFRA-207ENST00000509092 SMIM11BQ8TCY0 68 aa7.21□□□□□ -1.25
PDGFRA-207ENST00000509092 NDUFC1O43677 76 aa7.21□□□□□ -1.26
PDGFRA-207ENST00000509092 MIR7-3HGQ8N6C7 128 aa7.21□□□□□ -1.26
PDGFRA-207ENST00000509092 LINC00337Q8N6G1 96 aa7.21□□□□□ -1.26
PDGFRA-207ENST00000509092 LINC00482Q8N8I6 264 aa7.21□□□□□ -1.26
PDGFRA-207ENST00000509092 ATRXP46100 2492 aa7.21□□□□□ -1.26
PDGFRA-207ENST00000509092 ITPR1Q14643 2758 aa7.21□□□□□ -1.26
PDGFRA-207ENST00000509092 ROS1P08922 2347 aa7.21□□□□□ -1.26
PDGFRA-207ENST00000509092 LECT2O14960 151 aa7.2□□□□□ -1.26
PDGFRA-207ENST00000509092 COX6A2Q02221 97 aa7.2□□□□□ -1.26
PDGFRA-207ENST00000509092 ORMDL1Q9P0S3 153 aa7.2□□□□□ -1.26
PDGFRA-207ENST00000509092 RP1L1Q8IWN7 2480 aaPredicted RBP7.2□□□□□ -1.26
PDGFRA-207ENST00000509092 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.2□□□□□ -1.26
PDGFRA-207ENST00000509092 IGKV2-29A2NJV5 120 aaPredicted RBP7.2□□□□□ -1.26
PDGFRA-207ENST00000509092 G3V318 75 aa7.2□□□□□ -1.26
PDGFRA-207ENST00000509092 BLCAPP62952 87 aa7.2□□□□□ -1.26
PDGFRA-207ENST00000509092 CFHR3Q02985 330 aa7.2□□□□□ -1.26
PDGFRA-207ENST00000509092 SS18Q15532 418 aa7.2□□□□□ -1.26
PDGFRA-207ENST00000509092 RMI2Q96E14 147 aa7.2□□□□□ -1.26
PDGFRA-207ENST00000509092 PKDREJQ9NTG1 2253 aa7.2□□□□□ -1.26
PDGFRA-207ENST00000509092 SMIM1B2RUZ4 78 aa7.19□□□□□ -1.26
PDGFRA-207ENST00000509092 LYNX1G3V0Z9 82 aa7.19□□□□□ -1.26
PDGFRA-207ENST00000509092 LYNX1P0DP58 116 aa7.19□□□□□ -1.26
PDGFRA-207ENST00000509092 IGFL3Q6UXB1 125 aa7.19□□□□□ -1.26
PDGFRA-207ENST00000509092 UNQ9165/PRO28630Q6UXU0 137 aa7.19□□□□□ -1.26
PDGFRA-207ENST00000509092 LINC00467Q9BRT7 94 aa7.19□□□□□ -1.26
PDGFRA-207ENST00000509092 SNURFQ9Y675 71 aa7.19□□□□□ -1.26
PDGFRA-207ENST00000509092 IGKV2-28A0A075B6P5 120 aa7.19□□□□□ -1.26
PDGFRA-207ENST00000509092 IGKV2D-28P01615 120 aa7.19□□□□□ -1.26
PDGFRA-207ENST00000509092 UBL5Q9BZL1 73 aa7.19□□□□□ -1.26
PDGFRA-207ENST00000509092 SMG1Q96Q15 3661 aaKnown RBP7.19□□□□□ -1.26
PDGFRA-207ENST00000509092 JMJD7-PLA2G4BH0Y9G9 81 aa7.18□□□□□ -1.26
PDGFRA-207ENST00000509092 NDUFA4O00483 81 aa7.18□□□□□ -1.26
PDGFRA-207ENST00000509092 MINOS1-NBL1R4GNA1 71 aa7.18□□□□□ -1.26
PDGFRA-207ENST00000509092 IGHV1OR15-1A0A075B7D0 117 aa7.18□□□□□ -1.26
PDGFRA-207ENST00000509092 MED13LQ71F56 2210 aa7.17□□□□□ -1.26
PDGFRA-207ENST00000509092 E7EQL1 145 aa7.17□□□□□ -1.26
PDGFRA-207ENST00000509092 FAM19A3Q7Z5A8 133 aa7.17□□□□□ -1.26
PDGFRA-207ENST00000509092 SND1-IT1Q9HBX3 110 aa7.17□□□□□ -1.26
PDGFRA-207ENST00000509092 USP24Q9UPU5 2620 aa7.17□□□□□ -1.26
PDGFRA-207ENST00000509092 IGKV3-7A0A075B6H7 116 aa7.17□□□□□ -1.26
PDGFRA-207ENST00000509092 C6orf226Q5I0X4 101 aa7.17□□□□□ -1.26
PDGFRA-207ENST00000509092 LINC00242Q5T6M2 205 aa7.17□□□□□ -1.26
PDGFRA-207ENST00000509092 SLPIP03973 132 aa7.16□□□□□ -1.26
PDGFRA-207ENST00000509092 RPL36AP83881 106 aaKnown RBP7.16□□□□□ -1.26
PDGFRA-207ENST00000509092 RPL36ALQ969Q0 106 aaKnown RBP7.16□□□□□ -1.26
PDGFRA-207ENST00000509092 IGHV3OR16-12A0A075B7B8 117 aa7.16□□□□□ -1.26
PDGFRA-207ENST00000509092 CCL21O00585 134 aa7.16□□□□□ -1.26
PDGFRA-207ENST00000509092 IGHV3-73A0A0B4J1V6 119 aa7.15□□□□□ -1.26
PDGFRA-207ENST00000509092 CACNA1BQ00975 2339 aa7.15□□□□□ -1.26
PDGFRA-207ENST00000509092 LINC00167Q96N53 147 aa7.15□□□□□ -1.26
PDGFRA-207ENST00000509092 NBASA2RRP1 2371 aa7.15□□□□□ -1.26
PDGFRA-207ENST00000509092 EPG5Q9HCE0 2579 aa7.15□□□□□ -1.27
PDGFRA-207ENST00000509092 PROK1P58294 105 aa7.15□□□□□ -1.27
PDGFRA-207ENST00000509092 PMAIP1Q13794 54 aa7.15□□□□□ -1.27
PDGFRA-207ENST00000509092 DGAT2L7PQ6IED9 249 aa7.15□□□□□ -1.27
PDGFRA-207ENST00000509092 C11orf72Q8NBR9 251 aa7.15□□□□□ -1.27
PDGFRA-207ENST00000509092 IL17DQ8TAD2 202 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms