RNA–Protein interactions for RNA: ENST00000508895.5

SNCA-211, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SNCA, Length 905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-211ENST00000508895 PRR34Q9NV39 138 aa5.73□□□□□ -1.49
SNCA-211ENST00000508895 H7C423 109 aa5.72□□□□□ -1.49
SNCA-211ENST00000508895 TCAPO15273 167 aa5.72□□□□□ -1.49
SNCA-211ENST00000508895 FCER1GP30273 86 aa5.72□□□□□ -1.49
SNCA-211ENST00000508895 MRPL52Q86TS9 123 aaKnown RBP5.72□□□□□ -1.49
SNCA-211ENST00000508895 LINC00269Q8N2A0 174 aa5.72□□□□□ -1.49
SNCA-211ENST00000508895 UBE2WQ96B02 151 aa5.72□□□□□ -1.49
SNCA-211ENST00000508895 ALKBH7Q9BT30 221 aaPredicted RBP5.72□□□□□ -1.49
SNCA-211ENST00000508895 FAM30AQ9NZY2 134 aa5.72□□□□□ -1.49
SNCA-211ENST00000508895 TRAV8-3A0A0A6YYJ7 113 aa5.71□□□□□ -1.5
SNCA-211ENST00000508895 LOC389332A0A1B0GUA5 103 aa5.71□□□□□ -1.5
SNCA-211ENST00000508895 SCO1O75880 301 aa5.71□□□□□ -1.5
SNCA-211ENST00000508895 CRPP02741 224 aa5.71□□□□□ -1.5
SNCA-211ENST00000508895 ZNF25P17030 456 aaPredicted RBP5.71□□□□□ -1.5
SNCA-211ENST00000508895 RPL39P62891 51 aaKnown RBP5.71□□□□□ -1.5
SNCA-211ENST00000508895 REG3AQ06141 175 aa5.71□□□□□ -1.5
SNCA-211ENST00000508895 LINC01620Q4KN68 170 aa5.71□□□□□ -1.5
SNCA-211ENST00000508895 AMMECR1LQ6DCA0 310 aa5.71□□□□□ -1.5
SNCA-211ENST00000508895 Q8N8P6 123 aa5.71□□□□□ -1.5
SNCA-211ENST00000508895 UBE2D4Q9Y2X8 147 aa5.71□□□□□ -1.5
SNCA-211ENST00000508895 TRAPPC1Q9Y5R8 145 aa5.71□□□□□ -1.5
SNCA-211ENST00000508895 IGKV2D-24A0A075B6R9 120 aa5.7□□□□□ -1.5
SNCA-211ENST00000508895 IFI27P40305 119 aaPredicted RBP5.7□□□□□ -1.5
SNCA-211ENST00000508895 FABP9Q0Z7S8 132 aa5.7□□□□□ -1.5
SNCA-211ENST00000508895 MIAQ16674 131 aa5.7□□□□□ -1.5
SNCA-211ENST00000508895 RNASEKQ6P5S7 137 aaKnown RBP5.7□□□□□ -1.5
SNCA-211ENST00000508895 KRTAP26-1Q6PEX3 210 aa5.7□□□□□ -1.5
SNCA-211ENST00000508895 Q6ZUT4 128 aa5.7□□□□□ -1.5
SNCA-211ENST00000508895 NTN5Q8WTR8 489 aaPredicted RBP5.7□□□□□ -1.5
SNCA-211ENST00000508895 BAALCQ8WXS3 180 aa5.7□□□□□ -1.5
SNCA-211ENST00000508895 FAM104AQ969W3 186 aa5.7□□□□□ -1.5
SNCA-211ENST00000508895 FLG2Q5D862 2391 aaPredicted RBP5.69□□□□□ -1.5
SNCA-211ENST00000508895 IGLV10-54A0A075B6I4 117 aa5.69□□□□□ -1.5
SNCA-211ENST00000508895 ATP6V1G1O75348 118 aa5.69□□□□□ -1.5
SNCA-211ENST00000508895 Q0VG73 95 aa5.69□□□□□ -1.5
SNCA-211ENST00000508895 Q8N1X5 172 aa5.69□□□□□ -1.5
SNCA-211ENST00000508895 Q8N814 137 aa5.69□□□□□ -1.5
SNCA-211ENST00000508895 OR5A1Q8NGJ0 315 aa5.69□□□□□ -1.5
SNCA-211ENST00000508895 C18orf32Q8TCD1 76 aa5.69□□□□□ -1.5
SNCA-211ENST00000508895 C1orf43Q9BWL3 253 aa5.69□□□□□ -1.5
SNCA-211ENST00000508895 NXT2Q9NPJ8 142 aaKnown RBP5.69□□□□□ -1.5
SNCA-211ENST00000508895 PGPEP1Q9NXJ5 209 aa5.69□□□□□ -1.5
SNCA-211ENST00000508895 IGKV3OR2-268A0A0C4DH90 116 aa5.68□□□□□ -1.5
SNCA-211ENST00000508895 LINC01546A6NGU7 62 aa5.68□□□□□ -1.5
SNCA-211ENST00000508895 COLCA2A8K830 154 aa5.68□□□□□ -1.5
SNCA-211ENST00000508895 PSCAO43653 123 aa5.68□□□□□ -1.5
SNCA-211ENST00000508895 RNASE13Q5GAN3 156 aaKnown RBP5.68□□□□□ -1.5
SNCA-211ENST00000508895 RMI2Q96E14 147 aa5.68□□□□□ -1.5
SNCA-211ENST00000508895 URB1-AS1Q96HZ7 61 aa5.68□□□□□ -1.5
SNCA-211ENST00000508895 TIMM21Q9BVV7 248 aa5.68□□□□□ -1.5
SNCA-211ENST00000508895 TM2D2Q9BX73 214 aa5.68□□□□□ -1.5
SNCA-211ENST00000508895 CDC42SE2Q9NRR3 84 aa5.68□□□□□ -1.5
SNCA-211ENST00000508895 CSDC2Q9Y534 153 aaKnown RBP5.68□□□□□ -1.5
SNCA-211ENST00000508895 K7EMI3 77 aa5.67□□□□□ -1.5
SNCA-211ENST00000508895 SMR3BP02814 79 aaPredicted RBP5.67□□□□□ -1.5
SNCA-211ENST00000508895 RAB5AP20339 215 aa5.67□□□□□ -1.5
SNCA-211ENST00000508895 GCSHP23434 173 aa5.67□□□□□ -1.5
SNCA-211ENST00000508895 ORMDL2Q53FV1 153 aa5.67□□□□□ -1.5
SNCA-211ENST00000508895 ZNF664Q8N3J9 261 aa5.67□□□□□ -1.5
SNCA-211ENST00000508895 TMEM18Q96B42 140 aa5.67□□□□□ -1.5
SNCA-211ENST00000508895 TMEM101Q96IK0 257 aa5.67□□□□□ -1.5
SNCA-211ENST00000508895 OPRPNQ99935 248 aaPredicted RBP5.67□□□□□ -1.5
SNCA-211ENST00000508895 SPANXA1Q9NS26 97 aa5.67□□□□□ -1.5
SNCA-211ENST00000508895 COX11Q9Y6N1 276 aa5.67□□□□□ -1.5
SNCA-211ENST00000508895 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.66□□□□□ -1.5
SNCA-211ENST00000508895 IGLV4-3A0A075B6K6 122 aa5.66□□□□□ -1.5
SNCA-211ENST00000508895 A0A096LNJ9 63 aa5.66□□□□□ -1.5
SNCA-211ENST00000508895 IGLV5-52A0A0A0MRZ9 124 aa5.66□□□□□ -1.5
SNCA-211ENST00000508895 CDPF1Q6NVV7 123 aa5.66□□□□□ -1.5
SNCA-211ENST00000508895 C2orf66Q6UXQ4 117 aa5.66□□□□□ -1.5
SNCA-211ENST00000508895 CYSLTR1Q9Y271 337 aa5.66□□□□□ -1.5
SNCA-211ENST00000508895 TRAV8-4A0A0B4J246 113 aa5.65□□□□□ -1.5
SNCA-211ENST00000508895 LINC00959A0A1B0GUT2 108 aa5.65□□□□□ -1.5
SNCA-211ENST00000508895 EREGO14944 169 aa5.65□□□□□ -1.5
SNCA-211ENST00000508895 TRGC2P03986 189 aa5.65□□□□□ -1.5
SNCA-211ENST00000508895 MRPS36P82909 103 aaKnown RBP5.65□□□□□ -1.5
SNCA-211ENST00000508895 SMAGPQ0VAQ4 97 aa5.65□□□□□ -1.5
SNCA-211ENST00000508895 DGAT2L7PQ6IED9 249 aa5.65□□□□□ -1.5
SNCA-211ENST00000508895 LINC00173Q6ZV60 143 aa5.65□□□□□ -1.5
SNCA-211ENST00000508895 PRSS3P2Q8NHM4 247 aa5.65□□□□□ -1.5
SNCA-211ENST00000508895 CHCHD10Q8WYQ3 142 aaPredicted RBP5.65□□□□□ -1.5
SNCA-211ENST00000508895 PYGO1Q9Y3Y4 419 aa5.65□□□□□ -1.5
SNCA-211ENST00000508895 PKHD1L1Q86WI1 4243 aa5.64□□□□□ -1.51
SNCA-211ENST00000508895 IGIPA6NJ69 53 aa5.64□□□□□ -1.51
SNCA-211ENST00000508895 USP17L23D6RBM5 183 aa5.64□□□□□ -1.51
SNCA-211ENST00000508895 FA2HQ7L5A8 372 aa5.64□□□□□ -1.51
SNCA-211ENST00000508895 TOMM6Q96B49 74 aa5.64□□□□□ -1.51
SNCA-211ENST00000508895 AP5S1Q9NUS5 200 aa5.64□□□□□ -1.51
SNCA-211ENST00000508895 GAGE12HA6NDE8 117 aa5.63□□□□□ -1.51
SNCA-211ENST00000508895 IFITM10A6NMD0 228 aa5.63□□□□□ -1.51
SNCA-211ENST00000508895 CCL25O15444 150 aa5.63□□□□□ -1.51
SNCA-211ENST00000508895 XCL1P47992 114 aa5.63□□□□□ -1.51
SNCA-211ENST00000508895 LINC00310P59036 64 aa5.63□□□□□ -1.51
SNCA-211ENST00000508895 FOXI1Q12951 378 aa5.63□□□□□ -1.51
SNCA-211ENST00000508895 Q6ZSA8 131 aa5.63□□□□□ -1.51
SNCA-211ENST00000508895 C15orf56Q8N910 161 aa5.63□□□□□ -1.51
SNCA-211ENST00000508895 TMEM141Q96I45 108 aa5.63□□□□□ -1.51
SNCA-211ENST00000508895 TIMM17AQ99595 171 aa5.63□□□□□ -1.51
SNCA-211ENST00000508895 MYCBP2O75592 4640 aa5.62□□□□□ -1.51
SNCA-211ENST00000508895 TRAV13-1A0A0B4J241 112 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms