RNA–Protein interactions for RNA: ENST00000508800.1

NEDD9-212, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 834 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-212ENST00000508800 Q6ZNX1 250 aa6.52□□□□□ -1.37
NEDD9-212ENST00000508800 OPRPNQ99935 248 aaPredicted RBP6.52□□□□□ -1.37
NEDD9-212ENST00000508800 MRPL35Q9NZE8 188 aaKnown RBP6.52□□□□□ -1.37
NEDD9-212ENST00000508800 F2Z2F3 143 aa6.51□□□□□ -1.37
NEDD9-212ENST00000508800 NUPR1O60356 82 aa6.51□□□□□ -1.37
NEDD9-212ENST00000508800 IGLC6P0CF74 106 aa6.51□□□□□ -1.37
NEDD9-212ENST00000508800 RPS20P60866 119 aaKnown RBP6.51□□□□□ -1.37
NEDD9-212ENST00000508800 MZT2BQ6NZ67 158 aa6.51□□□□□ -1.37
NEDD9-212ENST00000508800 LINC00304Q8N9R0 145 aa6.51□□□□□ -1.37
NEDD9-212ENST00000508800 TPPP3Q9BW30 176 aa6.51□□□□□ -1.37
NEDD9-212ENST00000508800 PPDPFQ9H3Y8 114 aa6.51□□□□□ -1.37
NEDD9-212ENST00000508800 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.5□□□□□ -1.37
NEDD9-212ENST00000508800 SPAG11BQ08648 103 aa6.5□□□□□ -1.37
NEDD9-212ENST00000508800 ZNF726P1Q15940 193 aa6.5□□□□□ -1.37
NEDD9-212ENST00000508800 CST9LP1Q5W188 147 aa6.5□□□□□ -1.37
NEDD9-212ENST00000508800 BAGE2Q86Y30 109 aa6.5□□□□□ -1.37
NEDD9-212ENST00000508800 OR10D4PQ8NGN7 298 aa6.5□□□□□ -1.37
NEDD9-212ENST00000508800 LOC100996750A0A140TA64 210 aa6.49□□□□□ -1.37
NEDD9-212ENST00000508800 SEC61BP60468 96 aaKnown RBP6.49□□□□□ -1.37
NEDD9-212ENST00000508800 TMEM241Q24JQ0 296 aa6.49□□□□□ -1.37
NEDD9-212ENST00000508800 MRPL52Q86TS9 123 aaKnown RBP6.49□□□□□ -1.37
NEDD9-212ENST00000508800 LINC00337Q8N6G1 96 aa6.49□□□□□ -1.37
NEDD9-212ENST00000508800 MRAP2Q96G30 205 aa6.49□□□□□ -1.37
NEDD9-212ENST00000508800 KRTAP4-6Q9BYQ5 205 aa6.49□□□□□ -1.37
NEDD9-212ENST00000508800 CDC42SE2Q9NRR3 84 aa6.49□□□□□ -1.37
NEDD9-212ENST00000508800 XKRY2A2RUG3 117 aa6.48□□□□□ -1.37
NEDD9-212ENST00000508800 NDUFA1O15239 70 aa6.48□□□□□ -1.37
NEDD9-212ENST00000508800 TSHBP01222 138 aa6.48□□□□□ -1.37
NEDD9-212ENST00000508800 RPL28P46779 137 aaKnown RBP6.48□□□□□ -1.37
NEDD9-212ENST00000508800 TEX261Q6UWH6 196 aa6.48□□□□□ -1.37
NEDD9-212ENST00000508800 SDHAF1A6NFY7 115 aa6.47□□□□□ -1.37
NEDD9-212ENST00000508800 FP248Q71RG6 208 aaPredicted RBP6.47□□□□□ -1.37
NEDD9-212ENST00000508800 GATD1Q8NB37 220 aa6.47□□□□□ -1.37
NEDD9-212ENST00000508800 SMDT1Q9H4I9 107 aa6.47□□□□□ -1.37
NEDD9-212ENST00000508800 MAP1LC3B2A6NCE7 125 aa6.46□□□□□ -1.38
NEDD9-212ENST00000508800 I3L3M4 83 aa6.46□□□□□ -1.38
NEDD9-212ENST00000508800 SMAGPQ0VAQ4 97 aa6.46□□□□□ -1.38
NEDD9-212ENST00000508800 MAP1LC3BQ9GZQ8 125 aa6.46□□□□□ -1.38
NEDD9-212ENST00000508800 ALG5Q9Y673 324 aa6.46□□□□□ -1.38
NEDD9-212ENST00000508800 INMT-MINDY4F8WBC2 141 aa6.45□□□□□ -1.38
NEDD9-212ENST00000508800 SSNA1O43805 119 aa6.45□□□□□ -1.38
NEDD9-212ENST00000508800 PMCHP20382 165 aa6.45□□□□□ -1.38
NEDD9-212ENST00000508800 FAM229BQ4G0N7 80 aa6.45□□□□□ -1.38
NEDD9-212ENST00000508800 GAGE2EQ4V326 116 aa6.45□□□□□ -1.38
NEDD9-212ENST00000508800 AKR1C8PQ5T2L2 129 aa6.45□□□□□ -1.38
NEDD9-212ENST00000508800 KRTAP7-1Q8IUC3 87 aa6.45□□□□□ -1.38
NEDD9-212ENST00000508800 ENKURQ8TC29 256 aa6.45□□□□□ -1.38
NEDD9-212ENST00000508800 GAGE2DQ9UEU5 116 aa6.45□□□□□ -1.38
NEDD9-212ENST00000508800 RPL39LQ96EH5 51 aaKnown RBP6.44□□□□□ -1.38
NEDD9-212ENST00000508800 KRTAP4-1Q9BYQ7 146 aa6.44□□□□□ -1.38
NEDD9-212ENST00000508800 BORCS7-ASMTA0A0B4J1R7 106 aa6.43□□□□□ -1.38
NEDD9-212ENST00000508800 PFDN1O60925 122 aa6.43□□□□□ -1.38
NEDD9-212ENST00000508800 KRTAP13-2Q52LG2 175 aa6.43□□□□□ -1.38
NEDD9-212ENST00000508800 LYZL1Q6UWQ5 148 aa6.43□□□□□ -1.38
NEDD9-212ENST00000508800 C5orf38Q86SI9 138 aa6.43□□□□□ -1.38
NEDD9-212ENST00000508800 ORAOV1Q8WV07 137 aa6.43□□□□□ -1.38
NEDD9-212ENST00000508800 CTDSP1Q9GZU7 261 aa6.43□□□□□ -1.38
NEDD9-212ENST00000508800 CSDC2Q9Y534 153 aaKnown RBP6.43□□□□□ -1.38
NEDD9-212ENST00000508800 SCO2A0A1W2PP80 73 aa6.42□□□□□ -1.38
NEDD9-212ENST00000508800 C7orf77A4D0Y5 90 aa6.42□□□□□ -1.38
NEDD9-212ENST00000508800 PAGE4O60829 102 aa6.42□□□□□ -1.38
NEDD9-212ENST00000508800 IFNA1P01562 189 aa6.42□□□□□ -1.38
NEDD9-212ENST00000508800 CTRLP40313 264 aa6.42□□□□□ -1.38
NEDD9-212ENST00000508800 KRTAP13-3Q3SY46 172 aa6.42□□□□□ -1.38
NEDD9-212ENST00000508800 LBHQ53QV2 105 aaPredicted RBP6.42□□□□□ -1.38
NEDD9-212ENST00000508800 LINC00242Q5T6M2 205 aa6.42□□□□□ -1.38
NEDD9-212ENST00000508800 SMIM15Q7Z3B0 74 aa6.42□□□□□ -1.38
NEDD9-212ENST00000508800 C9orf62Q8N4C0 152 aa6.42□□□□□ -1.38
NEDD9-212ENST00000508800 CNFNQ9BYD5 112 aa6.42□□□□□ -1.38
NEDD9-212ENST00000508800 CYTL1Q9NRR1 136 aa6.42□□□□□ -1.38
NEDD9-212ENST00000508800 IGKV2D-26A0A0A0MRZ7 120 aa6.41□□□□□ -1.38
NEDD9-212ENST00000508800 TRAV13-1A0A0B4J241 112 aa6.41□□□□□ -1.38
NEDD9-212ENST00000508800 TRBV6-5A0A0K0K1A5 114 aa6.41□□□□□ -1.38
NEDD9-212ENST00000508800 NDUFC2-KCTD14E9PQ53 114 aa6.41□□□□□ -1.38
NEDD9-212ENST00000508800 BCE1O60756 84 aa6.41□□□□□ -1.38
NEDD9-212ENST00000508800 TWIST1Q15672 202 aa6.41□□□□□ -1.38
NEDD9-212ENST00000508800 TMUB2Q71RG4 321 aa6.41□□□□□ -1.38
NEDD9-212ENST00000508800 C6orf48Q9UBA6 75 aa6.41□□□□□ -1.38
NEDD9-212ENST00000508800 TRBV30A0A0K0K1B3 111 aa6.4□□□□□ -1.38
NEDD9-212ENST00000508800 A0A1B0GVG6 124 aa6.4□□□□□ -1.38
NEDD9-212ENST00000508800 MT1HP80294 61 aa6.4□□□□□ -1.38
NEDD9-212ENST00000508800 C10orf25Q5T742 122 aa6.4□□□□□ -1.38
NEDD9-212ENST00000508800 SMIM12Q96EX1 92 aa6.4□□□□□ -1.38
NEDD9-212ENST00000508800 RPL35P42766 123 aaKnown RBP6.39□□□□□ -1.39
NEDD9-212ENST00000508800 RPL7L1Q6DKI1 246 aaKnown RBP6.39□□□□□ -1.39
NEDD9-212ENST00000508800 UNQ6190/PRO20217Q6UXQ8 127 aa6.39□□□□□ -1.39
NEDD9-212ENST00000508800 TMEM242Q9NWH2 141 aa6.39□□□□□ -1.39
NEDD9-212ENST00000508800 GHRHP01286 108 aa6.38□□□□□ -1.39
NEDD9-212ENST00000508800 KRTAP10-6P60371 365 aaPredicted RBP6.38□□□□□ -1.39
NEDD9-212ENST00000508800 C9orf129Q5T035 196 aaKnown RBP6.38□□□□□ -1.39
NEDD9-212ENST00000508800 SPAG11AQ6PDA7 123 aa6.38□□□□□ -1.39
NEDD9-212ENST00000508800 MARVELD1Q9BSK0 173 aa6.38□□□□□ -1.39
NEDD9-212ENST00000508800 ST20Q9HBF5 79 aa6.38□□□□□ -1.39
NEDD9-212ENST00000508800 BIN3Q9NQY0 253 aa6.38□□□□□ -1.39
NEDD9-212ENST00000508800 TP73-AS1Q9UF72 201 aa6.38□□□□□ -1.39
NEDD9-212ENST00000508800 TRBV27A0A0K0K1C4 114 aa6.37□□□□□ -1.39
NEDD9-212ENST00000508800 TNFRSF6BO95407 300 aa6.37□□□□□ -1.39
NEDD9-212ENST00000508800 PACRGQ96M98 296 aaPredicted RBP6.37□□□□□ -1.39
NEDD9-212ENST00000508800 ANAPC11Q9NYG5 84 aa6.37□□□□□ -1.39
NEDD9-212ENST00000508800 IGHV3OR16-9A0A0B4J2B5 98 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms