RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 MND1Q9BWT6 205 aa1.43□□□□□ -2.18
TOPBP1-206ENST00000508524 IFT46Q9NQC8 304 aa1.43□□□□□ -2.18
TOPBP1-206ENST00000508524 C8orf4Q9NR00 106 aa1.43□□□□□ -2.18
TOPBP1-206ENST00000508524 LINC00474Q9P2X8 69 aa1.43□□□□□ -2.18
TOPBP1-206ENST00000508524 PAIP2BQ9ULR5 123 aaKnown RBP1.43□□□□□ -2.18
TOPBP1-206ENST00000508524 ORC6Q9Y5N6 252 aa1.43□□□□□ -2.18
TOPBP1-206ENST00000508524 DUXBA0A1W2PPF3 345 aa1.42□□□□□ -2.18
TOPBP1-206ENST00000508524 RBAKDNA6NC62 111 aa1.42□□□□□ -2.18
TOPBP1-206ENST00000508524 K7EPK0 472 aa1.42□□□□□ -2.18
TOPBP1-206ENST00000508524 SULT1A3P0DMM9 295 aa1.42□□□□□ -2.18
TOPBP1-206ENST00000508524 SULT1A4P0DMN0 295 aa1.42□□□□□ -2.18
TOPBP1-206ENST00000508524 PRSS3P35030 304 aa1.42□□□□□ -2.18
TOPBP1-206ENST00000508524 RCVRNP35243 200 aa1.42□□□□□ -2.18
TOPBP1-206ENST00000508524 GUK1Q16774 197 aa1.42□□□□□ -2.18
TOPBP1-206ENST00000508524 TMEM78Q5T7P6 136 aa1.42□□□□□ -2.18
TOPBP1-206ENST00000508524 FP248Q71RG6 208 aaPredicted RBP1.42□□□□□ -2.18
TOPBP1-206ENST00000508524 LYZL2Q7Z4W2 148 aa1.42□□□□□ -2.18
TOPBP1-206ENST00000508524 C3orf22Q8N5N4 141 aa1.42□□□□□ -2.18
TOPBP1-206ENST00000508524 YIPF6Q96EC8 236 aa1.42□□□□□ -2.18
TOPBP1-206ENST00000508524 DIRAS2Q96HU8 199 aa1.42□□□□□ -2.18
TOPBP1-206ENST00000508524 CARD19Q96LW7 228 aa1.42□□□□□ -2.18
TOPBP1-206ENST00000508524 CCDC90BQ9GZT6 254 aa1.42□□□□□ -2.18
TOPBP1-206ENST00000508524 NPVFQ9HCQ7 196 aa1.42□□□□□ -2.18
TOPBP1-206ENST00000508524 DIABLOQ9NR28 239 aa1.42□□□□□ -2.18
TOPBP1-206ENST00000508524 COMMD3Q9UBI1 195 aa1.42□□□□□ -2.18
TOPBP1-206ENST00000508524 DSTQ03001 7570 aaKnown RBP1.41□□□□□ -2.18
TOPBP1-206ENST00000508524 A0A1W2PPV4 95 aa1.41□□□□□ -2.18
TOPBP1-206ENST00000508524 PDCD5O14737 125 aa1.41□□□□□ -2.18
TOPBP1-206ENST00000508524 MBP02144 154 aa1.41□□□□□ -2.18
TOPBP1-206ENST00000508524 RAB2AP61019 212 aa1.41□□□□□ -2.18
TOPBP1-206ENST00000508524 RRAS2P62070 204 aaPredicted RBP1.41□□□□□ -2.18
TOPBP1-206ENST00000508524 MLLT11Q13015 90 aaPredicted RBP1.41□□□□□ -2.18
TOPBP1-206ENST00000508524 FAM19A5Q7Z5A7 132 aaPredicted RBP1.41□□□□□ -2.18
TOPBP1-206ENST00000508524 ASB13Q8WXK3 278 aa1.41□□□□□ -2.18
TOPBP1-206ENST00000508524 ANP32BQ92688 251 aaKnown RBP1.41□□□□□ -2.18
TOPBP1-206ENST00000508524 FAM167A-AS1Q96KT0 104 aa1.41□□□□□ -2.18
TOPBP1-206ENST00000508524 MGST2Q99735 147 aa1.41□□□□□ -2.18
TOPBP1-206ENST00000508524 ACOT13Q9NPJ3 140 aa1.41□□□□□ -2.18
TOPBP1-206ENST00000508524 SLC39A9Q9NUM3 307 aa1.41□□□□□ -2.18
TOPBP1-206ENST00000508524 AHNAK2Q8IVF2 5795 aa1.4□□□□□ -2.18
TOPBP1-206ENST00000508524 TRBV7-3A0A075B6L6 115 aa1.4□□□□□ -2.19
TOPBP1-206ENST00000508524 IGHV6-1A0A0B4J1U7 121 aa1.4□□□□□ -2.19
TOPBP1-206ENST00000508524 TRAV8-4A0A0B4J246 113 aa1.4□□□□□ -2.19
TOPBP1-206ENST00000508524 IGKV3OR2-268A0A0C4DH90 116 aa1.4□□□□□ -2.19
TOPBP1-206ENST00000508524 LOC107984640A0A0U1RRK4 108 aa1.4□□□□□ -2.19
TOPBP1-206ENST00000508524 COX7A2P2O60397 106 aa1.4□□□□□ -2.19
TOPBP1-206ENST00000508524 P01737 135 aa1.4□□□□□ -2.19
TOPBP1-206ENST00000508524 ARL14EPLP0DKL9 152 aa1.4□□□□□ -2.19
TOPBP1-206ENST00000508524 HIST1H1EP10412 219 aaKnown RBP1.4□□□□□ -2.19
TOPBP1-206ENST00000508524 RAB5AP20339 215 aa1.4□□□□□ -2.19
TOPBP1-206ENST00000508524 PMCHP20382 165 aa1.4□□□□□ -2.19
TOPBP1-206ENST00000508524 S100GP29377 79 aa1.4□□□□□ -2.19
TOPBP1-206ENST00000508524 SDC2P34741 201 aa1.4□□□□□ -2.19
TOPBP1-206ENST00000508524 SMCO1Q147U7 214 aa1.4□□□□□ -2.19
TOPBP1-206ENST00000508524 LGALSLQ3ZCW2 172 aaPredicted RBP1.4□□□□□ -2.19
TOPBP1-206ENST00000508524 SPANXN5Q5MJ07 72 aa1.4□□□□□ -2.19
TOPBP1-206ENST00000508524 FAM74A4Q5TZK3 123 aa1.4□□□□□ -2.19
TOPBP1-206ENST00000508524 MIC13Q5XKP0 118 aa1.4□□□□□ -2.19
TOPBP1-206ENST00000508524 PTH2Q96A98 100 aa1.4□□□□□ -2.19
TOPBP1-206ENST00000508524 ISOC2Q96AB3 205 aa1.4□□□□□ -2.19
TOPBP1-206ENST00000508524 ZNF471Q9BX82 626 aaPredicted RBP1.4□□□□□ -2.19
TOPBP1-206ENST00000508524 SH3BGRL3Q9H299 93 aa1.4□□□□□ -2.19
TOPBP1-206ENST00000508524 NAA60Q9H7X0 242 aa1.4□□□□□ -2.19
TOPBP1-206ENST00000508524 NDUFB11Q9NX14 153 aa1.4□□□□□ -2.19
TOPBP1-206ENST00000508524 PHLDA3Q9Y5J5 127 aa1.4□□□□□ -2.19
TOPBP1-206ENST00000508524 A0A0A6YYH2 397 aa1.39□□□□□ -2.19
TOPBP1-206ENST00000508524 TRDV1A0A1B0GX56 115 aa1.39□□□□□ -2.19
TOPBP1-206ENST00000508524 A6NJ64 397 aa1.39□□□□□ -2.19
TOPBP1-206ENST00000508524 A8MWV9 139 aa1.39□□□□□ -2.19
TOPBP1-206ENST00000508524 M0QXV9 152 aa1.39□□□□□ -2.19
TOPBP1-206ENST00000508524 CD3DP04234 171 aa1.39□□□□□ -2.19
TOPBP1-206ENST00000508524 STAG3L2P0CL84 134 aa1.39□□□□□ -2.19
TOPBP1-206ENST00000508524 RPL18AQ02543 176 aaKnown RBP1.39□□□□□ -2.19
TOPBP1-206ENST00000508524 TRAM1Q15629 374 aa1.39□□□□□ -2.19
TOPBP1-206ENST00000508524 IQCJQ1A5X6 159 aa1.39□□□□□ -2.19
TOPBP1-206ENST00000508524 DNAL1Q4LDG9 190 aa1.39□□□□□ -2.19
TOPBP1-206ENST00000508524 C10orf113Q5VZT2 155 aa1.39□□□□□ -2.19
TOPBP1-206ENST00000508524 NUP35Q8NFH5 326 aa1.39□□□□□ -2.19
TOPBP1-206ENST00000508524 FXYD5Q96DB9 178 aa1.39□□□□□ -2.19
TOPBP1-206ENST00000508524 TXNL4BQ9NX01 149 aaKnown RBP1.39□□□□□ -2.19
TOPBP1-206ENST00000508524 COPZ2Q9P299 210 aa1.39□□□□□ -2.19
TOPBP1-206ENST00000508524 PRELID1Q9Y255 219 aa1.39□□□□□ -2.19
TOPBP1-206ENST00000508524 TIMM9Q9Y5J7 89 aa1.39□□□□□ -2.19
TOPBP1-206ENST00000508524 TRAV21A0A0B4J279 112 aa1.38□□□□□ -2.19
TOPBP1-206ENST00000508524 TRBV10-1A0A0K0K1A3 114 aa1.38□□□□□ -2.19
TOPBP1-206ENST00000508524 TRBV6-1A0A0K0K1D8 114 aa1.38□□□□□ -2.19
TOPBP1-206ENST00000508524 ERICH4A6NGS2 130 aa1.38□□□□□ -2.19
TOPBP1-206ENST00000508524 H3BVH4 76 aa1.38□□□□□ -2.19
TOPBP1-206ENST00000508524 APOMO95445 188 aa1.38□□□□□ -2.19
TOPBP1-206ENST00000508524 METTL15P1P0C7V9 234 aa1.38□□□□□ -2.19
TOPBP1-206ENST00000508524 GZMBP10144 247 aa1.38□□□□□ -2.19
TOPBP1-206ENST00000508524 FGF6P10767 208 aa1.38□□□□□ -2.19
TOPBP1-206ENST00000508524 SPRR2EP22531 72 aa1.38□□□□□ -2.19
TOPBP1-206ENST00000508524 S100A7P31151 101 aa1.38□□□□□ -2.19
TOPBP1-206ENST00000508524 SPRR2BP35325 72 aa1.38□□□□□ -2.19
TOPBP1-206ENST00000508524 SPRR2AP35326 72 aa1.38□□□□□ -2.19
TOPBP1-206ENST00000508524 XCL1P47992 114 aa1.38□□□□□ -2.19
TOPBP1-206ENST00000508524 SULT1A2P50226 295 aa1.38□□□□□ -2.19
TOPBP1-206ENST00000508524 GNG5P63218 68 aa1.38□□□□□ -2.19
TOPBP1-206ENST00000508524 PDE6HQ13956 83 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms