RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 MRPS36P82909 103 aaKnown RBP6.9□□□□□ -1.3
HTT-204ENST00000508321 REG3AQ06141 175 aa6.9□□□□□ -1.3
HTT-204ENST00000508321 PAPPA-AS1Q5QFB9 102 aa6.9□□□□□ -1.3
HTT-204ENST00000508321 LINC00336Q6ZUF6 198 aa6.9□□□□□ -1.3
HTT-204ENST00000508321 UBE2WQ96B02 151 aa6.9□□□□□ -1.3
HTT-204ENST00000508321 KRTAP17-1Q9BYP8 105 aa6.9□□□□□ -1.3
HTT-204ENST00000508321 IGLV4-60A0A075B6I1 120 aa6.89□□□□□ -1.31
HTT-204ENST00000508321 CCL25O15444 150 aa6.89□□□□□ -1.31
HTT-204ENST00000508321 RPL39P62891 51 aaKnown RBP6.89□□□□□ -1.31
HTT-204ENST00000508321 LINC00269Q8N2A0 174 aa6.89□□□□□ -1.31
HTT-204ENST00000508321 TOMM6Q96B49 74 aa6.89□□□□□ -1.31
HTT-204ENST00000508321 TIMM17AQ99595 171 aa6.89□□□□□ -1.31
HTT-204ENST00000508321 C1orf43Q9BWL3 253 aa6.89□□□□□ -1.31
HTT-204ENST00000508321 HYDINQ4G0P3 5121 aa6.89□□□□□ -1.31
HTT-204ENST00000508321 HBDP02042 147 aa6.88□□□□□ -1.31
HTT-204ENST00000508321 Q6ZN92 141 aa6.88□□□□□ -1.31
HTT-204ENST00000508321 Q6ZRN7 208 aaPredicted RBP6.88□□□□□ -1.31
HTT-204ENST00000508321 BAGE3Q86Y29 109 aa6.88□□□□□ -1.31
HTT-204ENST00000508321 ZNF664Q8N3J9 261 aa6.88□□□□□ -1.31
HTT-204ENST00000508321 CDC42SE2Q9NRR3 84 aa6.88□□□□□ -1.31
HTT-204ENST00000508321 PSCAO43653 123 aa6.87□□□□□ -1.31
HTT-204ENST00000508321 ENHOQ6UWT2 76 aa6.87□□□□□ -1.31
HTT-204ENST00000508321 Q6ZUT4 128 aa6.87□□□□□ -1.31
HTT-204ENST00000508321 ERASQ7Z444 233 aa6.87□□□□□ -1.31
HTT-204ENST00000508321 TMEM141Q96I45 108 aa6.87□□□□□ -1.31
HTT-204ENST00000508321 C2orf88Q9BSF0 95 aa6.87□□□□□ -1.31
HTT-204ENST00000508321 Q9HAA7 133 aa6.87□□□□□ -1.31
HTT-204ENST00000508321 IGLV4-3A0A075B6K6 122 aa6.86□□□□□ -1.31
HTT-204ENST00000508321 IGKV2D-24A0A075B6R9 120 aa6.86□□□□□ -1.31
HTT-204ENST00000508321 IGIPA6NJ69 53 aa6.86□□□□□ -1.31
HTT-204ENST00000508321 C1orf196B1AJZ1 125 aa6.86□□□□□ -1.31
HTT-204ENST00000508321 RTL8CO15255 209 aa6.86□□□□□ -1.31
HTT-204ENST00000508321 HIST1H2BKO60814 126 aa6.86□□□□□ -1.31
HTT-204ENST00000508321 HSBP1O75506 76 aa6.86□□□□□ -1.31
HTT-204ENST00000508321 HIST1H2BJP06899 126 aa6.86□□□□□ -1.31
HTT-204ENST00000508321 HIST1H2BOP23527 126 aa6.86□□□□□ -1.31
HTT-204ENST00000508321 HIST1H2BBP33778 126 aa6.86□□□□□ -1.31
HTT-204ENST00000508321 HIST1H2BDP58876 126 aa6.86□□□□□ -1.31
HTT-204ENST00000508321 HIST1H2BCP62807 126 aa6.86□□□□□ -1.31
HTT-204ENST00000508321 HIST2H2BEQ16778 126 aa6.86□□□□□ -1.31
HTT-204ENST00000508321 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.86□□□□□ -1.31
HTT-204ENST00000508321 CLPSL2Q6UWE3 100 aa6.86□□□□□ -1.31
HTT-204ENST00000508321 TEX43Q6ZNM6 134 aa6.86□□□□□ -1.31
HTT-204ENST00000508321 HIST1H2BHQ93079 126 aa6.86□□□□□ -1.31
HTT-204ENST00000508321 URB1-AS1Q96HZ7 61 aa6.86□□□□□ -1.31
HTT-204ENST00000508321 HIST1H2BNQ99877 126 aa6.86□□□□□ -1.31
HTT-204ENST00000508321 HIST1H2BMQ99879 126 aa6.86□□□□□ -1.31
HTT-204ENST00000508321 ATP5LO75964 103 aa6.85□□□□□ -1.31
HTT-204ENST00000508321 SS18Q15532 418 aa6.85□□□□□ -1.31
HTT-204ENST00000508321 SCGB3A1Q96QR1 104 aa6.85□□□□□ -1.31
HTT-204ENST00000508321 A0A096LNJ9 63 aa6.84□□□□□ -1.31
HTT-204ENST00000508321 LINC00959A0A1B0GUT2 108 aa6.84□□□□□ -1.31
HTT-204ENST00000508321 IFITM10A6NMD0 228 aa6.84□□□□□ -1.31
HTT-204ENST00000508321 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.84□□□□□ -1.31
HTT-204ENST00000508321 SERF1AO75920 110 aa6.84□□□□□ -1.31
HTT-204ENST00000508321 EREGO14944 169 aa6.83□□□□□ -1.32
HTT-204ENST00000508321 SEC11AP67812 179 aa6.83□□□□□ -1.32
HTT-204ENST00000508321 PDZD11Q5EBL8 140 aa6.83□□□□□ -1.32
HTT-204ENST00000508321 COA6Q5JTJ3 125 aaKnown RBP6.83□□□□□ -1.32
HTT-204ENST00000508321 CHCHD10Q8WYQ3 142 aaPredicted RBP6.83□□□□□ -1.32
HTT-204ENST00000508321 FAM104AQ969W3 186 aa6.83□□□□□ -1.32
HTT-204ENST00000508321 AMELXQ99217 191 aa6.83□□□□□ -1.32
HTT-204ENST00000508321 VCX2Q9H322 139 aa6.83□□□□□ -1.32
HTT-204ENST00000508321 IGKV3OR2-268A0A0C4DH90 116 aa6.82□□□□□ -1.32
HTT-204ENST00000508321 PRSS29PA6NIE9 313 aa6.82□□□□□ -1.32
HTT-204ENST00000508321 LINC00310P59036 64 aa6.82□□□□□ -1.32
HTT-204ENST00000508321 C14orf177Q52M58 125 aa6.82□□□□□ -1.32
HTT-204ENST00000508321 CD164L2Q6UWJ8 174 aa6.82□□□□□ -1.32
HTT-204ENST00000508321 PACRGQ96M98 296 aaPredicted RBP6.82□□□□□ -1.32
HTT-204ENST00000508321 IGLV10-54A0A075B6I4 117 aa6.81□□□□□ -1.32
HTT-204ENST00000508321 TRAV13-1A0A0B4J241 112 aa6.81□□□□□ -1.32
HTT-204ENST00000508321 PMVKQ15126 192 aa6.81□□□□□ -1.32
HTT-204ENST00000508321 PMCHL1Q16048 86 aa6.81□□□□□ -1.32
HTT-204ENST00000508321 RNASE13Q5GAN3 156 aaKnown RBP6.81□□□□□ -1.32
HTT-204ENST00000508321 KRTAP26-1Q6PEX3 210 aa6.81□□□□□ -1.32
HTT-204ENST00000508321 LINC00173Q6ZV60 143 aa6.81□□□□□ -1.32
HTT-204ENST00000508321 FAM19A3Q7Z5A8 133 aa6.81□□□□□ -1.32
HTT-204ENST00000508321 A0A087WTM6 91 aa6.8□□□□□ -1.32
HTT-204ENST00000508321 GAGE12HA6NDE8 117 aa6.8□□□□□ -1.32
HTT-204ENST00000508321 XCL1P47992 114 aa6.8□□□□□ -1.32
HTT-204ENST00000508321 UBE2D1P51668 147 aa6.8□□□□□ -1.32
HTT-204ENST00000508321 TNP2Q05952 138 aa6.8□□□□□ -1.32
HTT-204ENST00000508321 FOXI1Q12951 378 aa6.8□□□□□ -1.32
HTT-204ENST00000508321 CFAP161Q6P656 301 aa6.8□□□□□ -1.32
HTT-204ENST00000508321 BAALCQ8WXS3 180 aa6.8□□□□□ -1.32
HTT-204ENST00000508321 OPRPNQ99935 248 aaPredicted RBP6.8□□□□□ -1.32
HTT-204ENST00000508321 HSPB8Q9UJY1 196 aa6.8□□□□□ -1.32
HTT-204ENST00000508321 FRAS1Q86XX4 4008 aa6.79□□□□□ -1.32
HTT-204ENST00000508321 LRCOL1A6NCL2 159 aa6.79□□□□□ -1.32
HTT-204ENST00000508321 LEPROTL1O95214 131 aa6.79□□□□□ -1.32
HTT-204ENST00000508321 HERVK_113P63121 156 aa6.79□□□□□ -1.32
HTT-204ENST00000508321 CDPF1Q6NVV7 123 aa6.79□□□□□ -1.32
HTT-204ENST00000508321 NTN5Q8WTR8 489 aaPredicted RBP6.79□□□□□ -1.32
HTT-204ENST00000508321 IFI27L1Q96BM0 104 aa6.79□□□□□ -1.32
HTT-204ENST00000508321 HERC2O95714 4834 aa6.79□□□□□ -1.32
HTT-204ENST00000508321 TRAV12-1A0A0B4J245 112 aa6.78□□□□□ -1.32
HTT-204ENST00000508321 COX7A2LO14548 114 aa6.78□□□□□ -1.32
HTT-204ENST00000508321 APOMO95445 188 aa6.78□□□□□ -1.32
HTT-204ENST00000508321 LINC00242Q5T6M2 205 aa6.78□□□□□ -1.32
HTT-204ENST00000508321 FAM19A2Q8N3H0 131 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms