RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 IGHV3OR16-12A0A075B7B8 117 aa3.57□□□□□ -1.84
HMGB3P16-201ENST00000508037 IGHV4-30-2A0A087WSY4 118 aa3.57□□□□□ -1.84
HMGB3P16-201ENST00000508037 K7EQD1 137 aa3.57□□□□□ -1.84
HMGB3P16-201ENST00000508037 ATOX1O00244 68 aa3.57□□□□□ -1.84
HMGB3P16-201ENST00000508037 NDUFA7O95182 113 aa3.57□□□□□ -1.84
HMGB3P16-201ENST00000508037 RBMY1A1P0DJD3 496 aaKnown RBP3.57□□□□□ -1.84
HMGB3P16-201ENST00000508037 RBMY1CP0DJD4 496 aa3.57□□□□□ -1.84
HMGB3P16-201ENST00000508037 MALP21145 153 aa3.57□□□□□ -1.84
HMGB3P16-201ENST00000508037 PRRC2AP48634 2157 aaKnown RBP3.57□□□□□ -1.84
HMGB3P16-201ENST00000508037 PROK1P58294 105 aa3.57□□□□□ -1.84
HMGB3P16-201ENST00000508037 RBMY1FQ15415 496 aaKnown RBP3.57□□□□□ -1.84
HMGB3P16-201ENST00000508037 DEFB112Q30KQ8 113 aa3.57□□□□□ -1.84
HMGB3P16-201ENST00000508037 TMEM95Q3KNT9 176 aa3.57□□□□□ -1.84
HMGB3P16-201ENST00000508037 S100A7L2Q5SY68 101 aa3.57□□□□□ -1.84
HMGB3P16-201ENST00000508037 Q6ZSN1 163 aa3.57□□□□□ -1.84
HMGB3P16-201ENST00000508037 C11orf72Q8NBR9 251 aa3.57□□□□□ -1.84
HMGB3P16-201ENST00000508037 LINC00526Q96FQ7 95 aa3.57□□□□□ -1.84
HMGB3P16-201ENST00000508037 CHCHD5Q9BSY4 110 aa3.57□□□□□ -1.84
HMGB3P16-201ENST00000508037 TMEM243Q9BU79 118 aa3.57□□□□□ -1.84
HMGB3P16-201ENST00000508037 MAP6D1Q9H9H5 199 aa3.57□□□□□ -1.84
HMGB3P16-201ENST00000508037 NBEAQ8NFP9 2946 aa3.57□□□□□ -1.84
HMGB3P16-201ENST00000508037 TRAV13-1A0A0B4J241 112 aa3.56□□□□□ -1.84
HMGB3P16-201ENST00000508037 IGHV3-38A0A0C4DH36 116 aa3.56□□□□□ -1.84
HMGB3P16-201ENST00000508037 A0A1B0GX51 115 aa3.56□□□□□ -1.84
HMGB3P16-201ENST00000508037 RBMY1BA6NDE4 496 aaKnown RBP3.56□□□□□ -1.84
HMGB3P16-201ENST00000508037 RBMY1EA6NEQ0 496 aaKnown RBP3.56□□□□□ -1.84
HMGB3P16-201ENST00000508037 A8MZ25 164 aa3.56□□□□□ -1.84
HMGB3P16-201ENST00000508037 RBMY1DP0C7P1 496 aaKnown RBP3.56□□□□□ -1.84
HMGB3P16-201ENST00000508037 COX7CP15954 63 aa3.56□□□□□ -1.84
HMGB3P16-201ENST00000508037 Q6JHZ5 121 aa3.56□□□□□ -1.84
HMGB3P16-201ENST00000508037 GAGE2AQ6NT46 116 aa3.56□□□□□ -1.84
HMGB3P16-201ENST00000508037 CFAP161Q6P656 301 aa3.56□□□□□ -1.84
HMGB3P16-201ENST00000508037 C5orf38Q86SI9 138 aa3.56□□□□□ -1.84
HMGB3P16-201ENST00000508037 LRRC75A-AS1Q8N1F1 130 aa3.56□□□□□ -1.84
HMGB3P16-201ENST00000508037 COX7B2Q8TF08 81 aa3.56□□□□□ -1.84
HMGB3P16-201ENST00000508037 C4orf3Q8WVX3 66 aa3.56□□□□□ -1.84
HMGB3P16-201ENST00000508037 ZNF702PQ9H963 129 aa3.56□□□□□ -1.84
HMGB3P16-201ENST00000508037 PTPRZ1P23471 2315 aaPredicted RBP3.55□□□□□ -1.84
HMGB3P16-201ENST00000508037 PRRC2CQ9Y520 2896 aaKnown RBP3.55□□□□□ -1.84
HMGB3P16-201ENST00000508037 TRGV1A0A0A0MS02 117 aa3.55□□□□□ -1.84
HMGB3P16-201ENST00000508037 IBA57-AS1B1ANH7 110 aa3.55□□□□□ -1.84
HMGB3P16-201ENST00000508037 F5H768 121 aa3.55□□□□□ -1.84
HMGB3P16-201ENST00000508037 C19orf84I3L1E1 186 aa3.55□□□□□ -1.84
HMGB3P16-201ENST00000508037 J3KT08 172 aa3.55□□□□□ -1.84
HMGB3P16-201ENST00000508037 CRYGAP11844 174 aa3.55□□□□□ -1.84
HMGB3P16-201ENST00000508037 GNLYP22749 145 aa3.55□□□□□ -1.84
HMGB3P16-201ENST00000508037 COX6A2Q02221 97 aa3.55□□□□□ -1.84
HMGB3P16-201ENST00000508037 ATP5EP2Q5VTU8 51 aa3.55□□□□□ -1.84
HMGB3P16-201ENST00000508037 Q6YL49 198 aa3.55□□□□□ -1.84
HMGB3P16-201ENST00000508037 Q6ZSV7 163 aa3.55□□□□□ -1.84
HMGB3P16-201ENST00000508037 STHQ8IWL8 128 aa3.55□□□□□ -1.84
HMGB3P16-201ENST00000508037 Q8N2B8 174 aa3.55□□□□□ -1.84
HMGB3P16-201ENST00000508037 IL17DQ8TAD2 202 aa3.55□□□□□ -1.84
HMGB3P16-201ENST00000508037 SND1-IT1Q9HBX3 110 aa3.55□□□□□ -1.84
HMGB3P16-201ENST00000508037 CDC42SE2Q9NRR3 84 aa3.55□□□□□ -1.84
HMGB3P16-201ENST00000508037 PTPRQQ9UMZ3 2332 aa3.55□□□□□ -1.84
HMGB3P16-201ENST00000508037 DSPP15924 2871 aaKnown RBP3.55□□□□□ -1.84
HMGB3P16-201ENST00000508037 BDP1A6H8Y1 2624 aa3.55□□□□□ -1.84
HMGB3P16-201ENST00000508037 SPTBN2O15020 2390 aa3.54□□□□□ -1.84
HMGB3P16-201ENST00000508037 HIST1H4AP62805 103 aaKnown RBP3.54□□□□□ -1.84
HMGB3P16-201ENST00000508037 RPS28P62857 69 aaKnown RBP3.54□□□□□ -1.84
HMGB3P16-201ENST00000508037 DEFB114Q30KQ6 69 aa3.54□□□□□ -1.84
HMGB3P16-201ENST00000508037 LCE5AQ5TCM9 118 aa3.54□□□□□ -1.84
HMGB3P16-201ENST00000508037 C10orf99Q6UWK7 81 aa3.54□□□□□ -1.84
HMGB3P16-201ENST00000508037 SOSTDC1Q6X4U4 206 aa3.54□□□□□ -1.84
HMGB3P16-201ENST00000508037 C11orf44Q8N8P7 122 aa3.54□□□□□ -1.84
HMGB3P16-201ENST00000508037 C16orf74Q96GX8 76 aa3.54□□□□□ -1.84
HMGB3P16-201ENST00000508037 A0A0U1RRA0 63 aa3.53□□□□□ -1.84
HMGB3P16-201ENST00000508037 TRBV6-4A0A1B0GX49 114 aa3.53□□□□□ -1.84
HMGB3P16-201ENST00000508037 A0A1W2PRX2 142 aa3.53□□□□□ -1.84
HMGB3P16-201ENST00000508037 JMJD7-PLA2G4BH0Y9G9 81 aa3.53□□□□□ -1.84
HMGB3P16-201ENST00000508037 FSHBP01225 129 aa3.53□□□□□ -1.84
HMGB3P16-201ENST00000508037 LINC00158P58513 81 aa3.53□□□□□ -1.84
HMGB3P16-201ENST00000508037 TMEM258P61165 79 aa3.53□□□□□ -1.84
HMGB3P16-201ENST00000508037 RPL18AQ02543 176 aaKnown RBP3.53□□□□□ -1.84
HMGB3P16-201ENST00000508037 TMEM86BQ8N661 226 aa3.53□□□□□ -1.84
HMGB3P16-201ENST00000508037 MIR7-3HGQ8N6C7 128 aa3.53□□□□□ -1.84
HMGB3P16-201ENST00000508037 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P16-201ENST00000508037 OR13C6PQ8NH95 151 aa3.53□□□□□ -1.84
HMGB3P16-201ENST00000508037 SMCR5Q8TEV8 140 aa3.53□□□□□ -1.84
HMGB3P16-201ENST00000508037 NRGNQ92686 78 aa3.53□□□□□ -1.84
HMGB3P16-201ENST00000508037 OBSCN-AS1Q96MR7 158 aa3.53□□□□□ -1.84
HMGB3P16-201ENST00000508037 KRTAP9-3Q9BYQ3 159 aa3.53□□□□□ -1.84
HMGB3P16-201ENST00000508037 ORMDL1Q9P0S3 153 aa3.53□□□□□ -1.84
HMGB3P16-201ENST00000508037 KLK5Q9Y337 293 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P16-201ENST00000508037 CELSR3Q9NYQ7 3312 aa3.53□□□□□ -1.84
HMGB3P16-201ENST00000508037 TNRC18O15417 2968 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P16-201ENST00000508037 SPTA1P02549 2419 aa3.52□□□□□ -1.85
HMGB3P16-201ENST00000508037 ANKRD11Q6UB99 2663 aaPredicted RBP3.52□□□□□ -1.85
HMGB3P16-201ENST00000508037 A0A087WZ39 114 aa3.52□□□□□ -1.85
HMGB3P16-201ENST00000508037 H3BQ85 93 aa3.52□□□□□ -1.85
HMGB3P16-201ENST00000508037 LINC00694P0DN24 101 aa3.52□□□□□ -1.85
HMGB3P16-201ENST00000508037 KHDC1LQ5JSQ8 128 aa3.52□□□□□ -1.85
HMGB3P16-201ENST00000508037 LINC01561Q8N1V8 128 aa3.52□□□□□ -1.85
HMGB3P16-201ENST00000508037 SERP2Q8N6R1 65 aa3.52□□□□□ -1.85
HMGB3P16-201ENST00000508037 FAM218AQ96MZ4 157 aa3.52□□□□□ -1.85
HMGB3P16-201ENST00000508037 KRTAP4-11Q9BYQ6 195 aa3.52□□□□□ -1.85
HMGB3P16-201ENST00000508037 XCL2Q9UBD3 114 aa3.52□□□□□ -1.85
HMGB3P16-201ENST00000508037 TLN1Q9Y490 2541 aaKnown RBP3.52□□□□□ -1.85
HMGB3P16-201ENST00000508037 MED13LQ71F56 2210 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms