RNA–Protein interactions for RNA: ENST00000507650.1

HOXC4-203, Transcript of homeobox C4, humanhuman

TSL 3

Gene HOXC4, Length 575 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-203ENST00000507650 PRSS3P2Q8NHM4 247 aa10.18□□□□□ -0.78
HOXC4-203ENST00000507650 MRAP2Q96G30 205 aa10.18□□□□□ -0.78
HOXC4-203ENST00000507650 AP5S1Q9NUS5 200 aa10.18□□□□□ -0.78
HOXC4-203ENST00000507650 XCL1P47992 114 aa10.17□□□□□ -0.78
HOXC4-203ENST00000507650 COX6A2Q02221 97 aa10.17□□□□□ -0.78
HOXC4-203ENST00000507650 TMEM241Q24JQ0 296 aa10.17□□□□□ -0.78
HOXC4-203ENST00000507650 MRPL52Q86TS9 123 aaKnown RBP10.17□□□□□ -0.78
HOXC4-203ENST00000507650 BORCS7Q96B45 105 aa10.17□□□□□ -0.78
HOXC4-203ENST00000507650 LINC00526Q96FQ7 95 aa10.17□□□□□ -0.78
HOXC4-203ENST00000507650 CDC42SE2Q9NRR3 84 aa10.17□□□□□ -0.78
HOXC4-203ENST00000507650 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.16□□□□□ -0.78
HOXC4-203ENST00000507650 CCL25O15444 150 aa10.16□□□□□ -0.78
HOXC4-203ENST00000507650 OXTP01178 125 aa10.16□□□□□ -0.78
HOXC4-203ENST00000507650 PLAC8Q9NZF1 115 aa10.16□□□□□ -0.78
HOXC4-203ENST00000507650 SMIM27A0A1W2PRY6 76 aa10.15□□□□□ -0.78
HOXC4-203ENST00000507650 MT1HL1P0DM35 61 aa10.15□□□□□ -0.78
HOXC4-203ENST00000507650 ADIRFQ15847 76 aa10.15□□□□□ -0.78
HOXC4-203ENST00000507650 RIGQ13278 110 aa10.14□□□□□ -0.79
HOXC4-203ENST00000507650 MRPL51Q4U2R6 128 aaKnown RBP10.14□□□□□ -0.79
HOXC4-203ENST00000507650 FAM74A3Q4VXF1 159 aa10.14□□□□□ -0.79
HOXC4-203ENST00000507650 CFAP161Q6P656 301 aa10.14□□□□□ -0.79
HOXC4-203ENST00000507650 FAM104AQ969W3 186 aa10.14□□□□□ -0.79
HOXC4-203ENST00000507650 TNXBP22105 4242 aa10.14□□□□□ -0.79
HOXC4-203ENST00000507650 A0A096LNI7 61 aa10.13□□□□□ -0.79
HOXC4-203ENST00000507650 C7orf77A4D0Y5 90 aa10.13□□□□□ -0.79
HOXC4-203ENST00000507650 RNASE13Q5GAN3 156 aaKnown RBP10.13□□□□□ -0.79
HOXC4-203ENST00000507650 FAM104BQ5XKR9 115 aa10.13□□□□□ -0.79
HOXC4-203ENST00000507650 NAT8Q9UHE5 227 aa10.13□□□□□ -0.79
HOXC4-203ENST00000507650 NAT8BQ9UHF3 227 aa10.13□□□□□ -0.79
HOXC4-203ENST00000507650 UBE2D4Q9Y2X8 147 aa10.13□□□□□ -0.79
HOXC4-203ENST00000507650 IGKV2-24A0A0C4DH68 120 aa10.12□□□□□ -0.79
HOXC4-203ENST00000507650 SUMO2P61956 95 aaKnown RBP10.12□□□□□ -0.79
HOXC4-203ENST00000507650 ZNF664Q8N3J9 261 aa10.12□□□□□ -0.79
HOXC4-203ENST00000507650 TMEM101Q96IK0 257 aa10.12□□□□□ -0.79
HOXC4-203ENST00000507650 BTF3L4Q96K17 158 aa10.12□□□□□ -0.79
HOXC4-203ENST00000507650 PHOX2AO14813 284 aa10.11□□□□□ -0.79
HOXC4-203ENST00000507650 A0A1B0GXF2 115 aa10.1□□□□□ -0.79
HOXC4-203ENST00000507650 VCYO14598 125 aa10.1□□□□□ -0.79
HOXC4-203ENST00000507650 CAMPP49913 170 aa10.1□□□□□ -0.79
HOXC4-203ENST00000507650 CD164L2Q6UWJ8 174 aa10.1□□□□□ -0.79
HOXC4-203ENST00000507650 Q6ZUT4 128 aa10.1□□□□□ -0.79
HOXC4-203ENST00000507650 UBR4Q5T4S7 5183 aa10.09□□□□□ -0.79
HOXC4-203ENST00000507650 IGHV1-58A0A0C4DH39 117 aa10.09□□□□□ -0.79
HOXC4-203ENST00000507650 MAJINQ3KP22 176 aa10.09□□□□□ -0.79
HOXC4-203ENST00000507650 CSDC2Q9Y534 153 aaKnown RBP10.09□□□□□ -0.79
HOXC4-203ENST00000507650 TRBV24-1A0A075B6N3 115 aa10.08□□□□□ -0.8
HOXC4-203ENST00000507650 RPL39P62891 51 aaKnown RBP10.08□□□□□ -0.8
HOXC4-203ENST00000507650 PEA15Q15121 130 aa10.08□□□□□ -0.8
HOXC4-203ENST00000507650 SS18Q15532 418 aa10.08□□□□□ -0.8
HOXC4-203ENST00000507650 DPH3Q96FX2 82 aa10.08□□□□□ -0.8
HOXC4-203ENST00000507650 NPYP01303 97 aa10.07□□□□□ -0.8
HOXC4-203ENST00000507650 FCER1GP30273 86 aa10.07□□□□□ -0.8
HOXC4-203ENST00000507650 MRPL54Q6P161 138 aaKnown RBP10.07□□□□□ -0.8
HOXC4-203ENST00000507650 STPG4Q8N801 248 aa10.07□□□□□ -0.8
HOXC4-203ENST00000507650 TNFRSF6BO95407 300 aa10.06□□□□□ -0.8
HOXC4-203ENST00000507650 RPL32P62910 135 aaKnown RBP10.06□□□□□ -0.8
HOXC4-203ENST00000507650 CARD19Q96LW7 228 aa10.06□□□□□ -0.8
HOXC4-203ENST00000507650 IGLV4-69A0A075B6H9 119 aa10.05□□□□□ -0.8
HOXC4-203ENST00000507650 D6R8Y8 96 aa10.05□□□□□ -0.8
HOXC4-203ENST00000507650 PPP1R2P9O14990 202 aa10.05□□□□□ -0.8
HOXC4-203ENST00000507650 PRR3P79522 188 aaKnown RBP10.05□□□□□ -0.8
HOXC4-203ENST00000507650 Q6ZRU5 148 aa10.05□□□□□ -0.8
HOXC4-203ENST00000507650 OPRPNQ99935 248 aaPredicted RBP10.05□□□□□ -0.8
HOXC4-203ENST00000507650 C20orf78Q9BR46 151 aa10.05□□□□□ -0.8
HOXC4-203ENST00000507650 TIMM21Q9BVV7 248 aa10.05□□□□□ -0.8
HOXC4-203ENST00000507650 KRTAP3-3Q9BYR6 98 aa10.05□□□□□ -0.8
HOXC4-203ENST00000507650 KRTAP3-2Q9BYR7 98 aa10.05□□□□□ -0.8
HOXC4-203ENST00000507650 SMDT1Q9H4I9 107 aa10.05□□□□□ -0.8
HOXC4-203ENST00000507650 TRAV13-1A0A0B4J241 112 aa10.04□□□□□ -0.8
HOXC4-203ENST00000507650 LINC00862A6NCI5 91 aa10.04□□□□□ -0.8
HOXC4-203ENST00000507650 PPP1R17O96001 155 aa10.04□□□□□ -0.8
HOXC4-203ENST00000507650 CKS2P33552 79 aa10.04□□□□□ -0.8
HOXC4-203ENST00000507650 HBBP68871 147 aa10.04□□□□□ -0.8
HOXC4-203ENST00000507650 SYCNQ0VAF6 134 aa10.04□□□□□ -0.8
HOXC4-203ENST00000507650 KIR2DL4Q99706 377 aa10.04□□□□□ -0.8
HOXC4-203ENST00000507650 SMIM2Q9BVW6 85 aa10.04□□□□□ -0.8
HOXC4-203ENST00000507650 A0A1B0GW15 77 aa10.03□□□□□ -0.8
HOXC4-203ENST00000507650 C1orf196B1AJZ1 125 aa10.03□□□□□ -0.8
HOXC4-203ENST00000507650 SERTAD4-AS1Q5TG53 156 aa10.03□□□□□ -0.8
HOXC4-203ENST00000507650 COX7A2LO14548 114 aa10.02□□□□□ -0.81
HOXC4-203ENST00000507650 TCAPO15273 167 aa10.02□□□□□ -0.81
HOXC4-203ENST00000507650 C5orf38Q86SI9 138 aa10.02□□□□□ -0.81
HOXC4-203ENST00000507650 PTTG1IPP53801 180 aa10.01□□□□□ -0.81
HOXC4-203ENST00000507650 ODF1Q14990 250 aa10.01□□□□□ -0.81
HOXC4-203ENST00000507650 C7orf33Q8WU49 177 aa10.01□□□□□ -0.81
HOXC4-203ENST00000507650 ZNF561-AS1K7EIQ3 104 aa10□□□□□ -0.81
HOXC4-203ENST00000507650 A0A1W2PNN7 141 aa9.99□□□□□ -0.81
HOXC4-203ENST00000507650 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.99□□□□□ -0.81
HOXC4-203ENST00000507650 IGHV3OR16-9A0A0B4J2B5 98 aa9.98□□□□□ -0.81
HOXC4-203ENST00000507650 A0A0J9YXV3 536 aa9.98□□□□□ -0.81
HOXC4-203ENST00000507650 MALP21145 153 aa9.98□□□□□ -0.81
HOXC4-203ENST00000507650 PLA2G2DQ9UNK4 145 aa9.98□□□□□ -0.81
HOXC4-203ENST00000507650 F8W036 122 aa9.97□□□□□ -0.81
HOXC4-203ENST00000507650 MRPS36P82909 103 aaKnown RBP9.97□□□□□ -0.81
HOXC4-203ENST00000507650 GAGE2BQ13066 116 aa9.97□□□□□ -0.81
HOXC4-203ENST00000507650 ATP5L2Q7Z4Y8 100 aa9.97□□□□□ -0.81
HOXC4-203ENST00000507650 CAMK2N2Q96S95 79 aa9.97□□□□□ -0.81
HOXC4-203ENST00000507650 SPANXA1Q9NS26 97 aa9.97□□□□□ -0.81
HOXC4-203ENST00000507650 LINC00474Q9P2X8 69 aa9.97□□□□□ -0.81
HOXC4-203ENST00000507650 LOC107984640A0A0U1RRK4 108 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms