RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 ZNF236Q9UL36 1845 aa-0.3□□□□□ -2.46
LSM6-205ENST00000507449 PKD1L1Q8TDX9 2849 aa-0.3□□□□□ -2.46
LSM6-205ENST00000507449 FOCADQ5VW36 1801 aa-0.31□□□□□ -2.46
LSM6-205ENST00000507449 PATJQ8NI35 1801 aa-0.31□□□□□ -2.46
LSM6-205ENST00000507449 MT4P47944 62 aa-0.31□□□□□ -2.46
LSM6-205ENST00000507449 DEFB109BQ30KR1 87 aa-0.31□□□□□ -2.46
LSM6-205ENST00000507449 Q5VSD8 79 aa-0.31□□□□□ -2.46
LSM6-205ENST00000507449 Q8IZM0 81 aa-0.31□□□□□ -2.46
LSM6-205ENST00000507449 TSC22D3Q99576 134 aa-0.31□□□□□ -2.46
LSM6-205ENST00000507449 SPCS1Q9Y6A9 102 aa-0.31□□□□□ -2.46
LSM6-205ENST00000507449 PTPRQQ9UMZ3 2332 aa-0.31□□□□□ -2.46
LSM6-205ENST00000507449 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.31□□□□□ -2.46
LSM6-205ENST00000507449 AKAP6Q13023 2319 aa-0.32□□□□□ -2.46
LSM6-205ENST00000507449 TRBV7-3A0A075B6L6 115 aa-0.32□□□□□ -2.46
LSM6-205ENST00000507449 MIF4GDA9UHW6 222 aaKnown RBP-0.32□□□□□ -2.46
LSM6-205ENST00000507449 I3L2K1 104 aa-0.32□□□□□ -2.46
LSM6-205ENST00000507449 SPANXDQ9BXN6 97 aa-0.32□□□□□ -2.46
LSM6-205ENST00000507449 STARD9Q9P2P6 4700 aa-0.32□□□□□ -2.46
LSM6-205ENST00000507449 C2CD3Q4AC94 2353 aa-0.32□□□□□ -2.46
LSM6-205ENST00000507449 RYR2Q92736 4967 aa-0.32□□□□□ -2.46
LSM6-205ENST00000507449 KDM3BQ7LBC6 1761 aa-0.32□□□□□ -2.46
LSM6-205ENST00000507449 PLXNB2O15031 1838 aa-0.33□□□□□ -2.46
LSM6-205ENST00000507449 VWFP04275 2813 aa-0.33□□□□□ -2.46
LSM6-205ENST00000507449 FGF7P21781 194 aa-0.33□□□□□ -2.46
LSM6-205ENST00000507449 KRTAP19-8Q3LI54 63 aa-0.33□□□□□ -2.46
LSM6-205ENST00000507449 PPP3R2Q96LZ3 170 aa-0.33□□□□□ -2.46
LSM6-205ENST00000507449 CPSF1Q10570 1443 aaKnown RBP-0.33□□□□□ -2.46
LSM6-205ENST00000507449 NCOR1O75376 2440 aa-0.33□□□□□ -2.46
LSM6-205ENST00000507449 CHD6Q8TD26 2715 aa-0.33□□□□□ -2.46
LSM6-205ENST00000507449 FAT2Q9NYQ8 4349 aa-0.34□□□□□ -2.46
LSM6-205ENST00000507449 SETD2Q9BYW2 2564 aaPredicted RBP-0.34□□□□□ -2.46
LSM6-205ENST00000507449 F8VRH5 84 aa-0.34□□□□□ -2.46
LSM6-205ENST00000507449 SPRR1AP35321 89 aa-0.34□□□□□ -2.46
LSM6-205ENST00000507449 CATR1Q13166 79 aa-0.34□□□□□ -2.46
LSM6-205ENST00000507449 TMEM170BQ5T4T1 132 aa-0.34□□□□□ -2.46
LSM6-205ENST00000507449 ERCC6L2Q5T890 1561 aa-0.34□□□□□ -2.46
LSM6-205ENST00000507449 MGST2Q99735 147 aa-0.34□□□□□ -2.46
LSM6-205ENST00000507449 TP53AIP1Q9HCN2 124 aa-0.34□□□□□ -2.46
LSM6-205ENST00000507449 DYNLRB1Q9NP97 96 aa-0.34□□□□□ -2.46
LSM6-205ENST00000507449 LINC00474Q9P2X8 69 aa-0.34□□□□□ -2.46
LSM6-205ENST00000507449 MYH9P35579 1960 aaKnown RBP-0.34□□□□□ -2.46
LSM6-205ENST00000507449 WNK3Q9BYP7 1800 aa-0.34□□□□□ -2.46
LSM6-205ENST00000507449 TENM2Q9NT68 2774 aa-0.34□□□□□ -2.46
LSM6-205ENST00000507449 SPTBN4Q9H254 2564 aa-0.35□□□□□ -2.46
LSM6-205ENST00000507449 LRRC37A2A6NM11 1700 aa-0.35□□□□□ -2.47
LSM6-205ENST00000507449 NF1P21359 2839 aa-0.35□□□□□ -2.47
LSM6-205ENST00000507449 IGLC7A0M8Q6 106 aa-0.35□□□□□ -2.47
LSM6-205ENST00000507449 PRM1P04553 51 aa-0.35□□□□□ -2.47
LSM6-205ENST00000507449 BAGE2Q86Y30 109 aa-0.35□□□□□ -2.47
LSM6-205ENST00000507449 PPRC1Q5VV67 1664 aaKnown RBP-0.35□□□□□ -2.47
LSM6-205ENST00000507449 BCL9LQ86UU0 1499 aa-0.35□□□□□ -2.47
LSM6-205ENST00000507449 ZANQ9Y493 2812 aa-0.36□□□□□ -2.47
LSM6-205ENST00000507449 ABCA13Q86UQ4 5058 aa-0.36□□□□□ -2.47
LSM6-205ENST00000507449 ACANP16112 2415 aa-0.36□□□□□ -2.47
LSM6-205ENST00000507449 C10orf71Q711Q0 1435 aa-0.36□□□□□ -2.47
LSM6-205ENST00000507449 OOSP1A8MZH6 123 aa-0.36□□□□□ -2.47
LSM6-205ENST00000507449 UQCR11O14957 56 aa-0.36□□□□□ -2.47
LSM6-205ENST00000507449 APOC2P02655 101 aa-0.36□□□□□ -2.47
LSM6-205ENST00000507449 COX17Q14061 63 aa-0.36□□□□□ -2.47
LSM6-205ENST00000507449 Q6JHZ5 121 aa-0.36□□□□□ -2.47
LSM6-205ENST00000507449 C5orf38Q86SI9 138 aa-0.36□□□□□ -2.47
LSM6-205ENST00000507449 LINC01558Q9Y6Z2 57 aa-0.36□□□□□ -2.47
LSM6-205ENST00000507449 LAMA5O15230 3695 aa-0.36□□□□□ -2.47
LSM6-205ENST00000507449 FAT3Q8TDW7 4589 aa-0.37□□□□□ -2.47
LSM6-205ENST00000507449 TEP1Q99973 2627 aaKnown RBP-0.37□□□□□ -2.47
LSM6-205ENST00000507449 HMGN4O00479 90 aa-0.37□□□□□ -2.47
LSM6-205ENST00000507449 COMMD6Q7Z4G1 85 aa-0.37□□□□□ -2.47
LSM6-205ENST00000507449 C8orf59Q8N0T1 100 aaPredicted RBP-0.37□□□□□ -2.47
LSM6-205ENST00000507449 C1orf54Q8WWF1 131 aa-0.37□□□□□ -2.47
LSM6-205ENST00000507449 ROCK2O75116 1388 aaKnown RBP-0.37□□□□□ -2.47
LSM6-205ENST00000507449 MYH8P13535 1937 aa-0.37□□□□□ -2.47
LSM6-205ENST00000507449 RIMS1Q86UR5 1692 aaKnown RBP-0.37□□□□□ -2.47
LSM6-205ENST00000507449 SONP18583 2426 aaKnown RBP-0.37□□□□□ -2.47
LSM6-205ENST00000507449 NAIPQ13075 1403 aa-0.38□□□□□ -2.47
LSM6-205ENST00000507449 PTPN13Q12923 2485 aa-0.38□□□□□ -2.47
LSM6-205ENST00000507449 SETXQ7Z333 2677 aaKnown RBP-0.38□□□□□ -2.47
LSM6-205ENST00000507449 FLNAP21333 2647 aaKnown RBP-0.38□□□□□ -2.47
LSM6-205ENST00000507449 HIVEP1P15822 2718 aa-0.38□□□□□ -2.47
LSM6-205ENST00000507449 SPRR2DP22532 72 aa-0.38□□□□□ -2.47
LSM6-205ENST00000507449 PP6455Q8WZ26 134 aa-0.38□□□□□ -2.47
LSM6-205ENST00000507449 BSNQ9UPA5 3926 aa-0.38□□□□□ -2.47
LSM6-205ENST00000507449 KIF21AQ7Z4S6 1674 aa-0.38□□□□□ -2.47
LSM6-205ENST00000507449 QRICH2Q9H0J4 1663 aa-0.38□□□□□ -2.47
LSM6-205ENST00000507449 BIRC6Q9NR09 4857 aa-0.38□□□□□ -2.47
LSM6-205ENST00000507449 LAMA2P24043 3122 aaKnown RBP-0.38□□□□□ -2.47
LSM6-205ENST00000507449 PI4KAP42356 2102 aa-0.38□□□□□ -2.47
LSM6-205ENST00000507449 DNHD1Q96M86 4753 aa-0.39□□□□□ -2.47
LSM6-205ENST00000507449 LRP1BQ9NZR2 4599 aa-0.39□□□□□ -2.47
LSM6-205ENST00000507449 A2ML1A8K2U0 1454 aa-0.39□□□□□ -2.47
LSM6-205ENST00000507449 SSSCA1O60232 199 aa-0.39□□□□□ -2.47
LSM6-205ENST00000507449 AKAIN1P0CW23 69 aa-0.39□□□□□ -2.47
LSM6-205ENST00000507449 S100A3P33764 101 aa-0.39□□□□□ -2.47
LSM6-205ENST00000507449 TPPP2P59282 170 aa-0.39□□□□□ -2.47
LSM6-205ENST00000507449 DSPP15924 2871 aaKnown RBP-0.39□□□□□ -2.47
LSM6-205ENST00000507449 EPG5Q9HCE0 2579 aa-0.4□□□□□ -2.47
LSM6-205ENST00000507449 PDZD2O15018 2839 aa-0.4□□□□□ -2.47
LSM6-205ENST00000507449 PKDREJQ9NTG1 2253 aa-0.4□□□□□ -2.47
LSM6-205ENST00000507449 TRBV6-1A0A0K0K1D8 114 aa-0.4□□□□□ -2.47
LSM6-205ENST00000507449 IFNGP01579 166 aa-0.4□□□□□ -2.47
LSM6-205ENST00000507449 ALMS1Q8TCU4 4167 aa-0.4□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms