RNA–Protein interactions for RNA: ENST00000507376.1

COPS4-205, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5

Gene COPS4, Length 438 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-205ENST00000507376 FAM168BA1KXE4 195 aa5.3□□□□□ -1.56
COPS4-205ENST00000507376 IGKV2-29A2NJV5 120 aaPredicted RBP5.3□□□□□ -1.56
COPS4-205ENST00000507376 LTAP01374 205 aa5.3□□□□□ -1.56
COPS4-205ENST00000507376 IGLV7-43P04211 117 aa5.3□□□□□ -1.56
COPS4-205ENST00000507376 XCL1P47992 114 aa5.3□□□□□ -1.56
COPS4-205ENST00000507376 C9orf116Q5BN46 136 aaPredicted RBP5.3□□□□□ -1.56
COPS4-205ENST00000507376 COX8CQ7Z4L0 72 aa5.3□□□□□ -1.56
COPS4-205ENST00000507376 RETNLBQ9BQ08 111 aa5.3□□□□□ -1.56
COPS4-205ENST00000507376 FAM240BA0A1B0GVZ2 78 aa5.29□□□□□ -1.56
COPS4-205ENST00000507376 H0Y9J4 135 aa5.29□□□□□ -1.56
COPS4-205ENST00000507376 CXorf1O96002 111 aa5.29□□□□□ -1.56
COPS4-205ENST00000507376 HERV-K104P63124 156 aa5.29□□□□□ -1.56
COPS4-205ENST00000507376 SPANXN1Q5VSR9 72 aa5.29□□□□□ -1.56
COPS4-205ENST00000507376 TMEM167BQ9NRX6 74 aa5.29□□□□□ -1.56
COPS4-205ENST00000507376 TMEM97Q5BJF2 176 aa5.28□□□□□ -1.56
COPS4-205ENST00000507376 AP1S3Q96PC3 154 aa5.28□□□□□ -1.56
COPS4-205ENST00000507376 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.27□□□□□ -1.57
COPS4-205ENST00000507376 CCL25O15444 150 aa5.27□□□□□ -1.57
COPS4-205ENST00000507376 UBE2G1P62253 170 aa5.27□□□□□ -1.57
COPS4-205ENST00000507376 MEF2BQ02080 365 aaPredicted RBP5.27□□□□□ -1.57
COPS4-205ENST00000507376 SYCNQ0VAF6 134 aa5.27□□□□□ -1.57
COPS4-205ENST00000507376 KRTAP7-1Q8IUC3 87 aa5.27□□□□□ -1.57
COPS4-205ENST00000507376 FER1L6-AS1Q8NA97 138 aa5.27□□□□□ -1.57
COPS4-205ENST00000507376 MARVELD1Q9BSK0 173 aa5.27□□□□□ -1.57
COPS4-205ENST00000507376 MED9Q9NWA0 146 aa5.27□□□□□ -1.57
COPS4-205ENST00000507376 IGLV4-69A0A075B6H9 119 aa5.26□□□□□ -1.57
COPS4-205ENST00000507376 UBE2L6O14933 153 aa5.26□□□□□ -1.57
COPS4-205ENST00000507376 OR5AL1P0C617 328 aa5.26□□□□□ -1.57
COPS4-205ENST00000507376 RPL18AQ02543 176 aaKnown RBP5.26□□□□□ -1.57
COPS4-205ENST00000507376 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.26□□□□□ -1.57
COPS4-205ENST00000507376 DIRC1Q969H9 104 aa5.26□□□□□ -1.57
COPS4-205ENST00000507376 FMC1Q96HJ9 113 aa5.26□□□□□ -1.57
COPS4-205ENST00000507376 OPRPNQ99935 248 aaPredicted RBP5.26□□□□□ -1.57
COPS4-205ENST00000507376 PSMG3Q9BT73 122 aaPredicted RBP5.26□□□□□ -1.57
COPS4-205ENST00000507376 ACTR3CQ9C0K3 210 aaPredicted RBP5.26□□□□□ -1.57
COPS4-205ENST00000507376 LINC00474Q9P2X8 69 aa5.26□□□□□ -1.57
COPS4-205ENST00000507376 ZFP30Q9Y2G7 519 aa5.26□□□□□ -1.57
COPS4-205ENST00000507376 IGLV1-50A0A075B6I6 118 aa5.25□□□□□ -1.57
COPS4-205ENST00000507376 IGLV5-37A0A075B6J1 123 aa5.25□□□□□ -1.57
COPS4-205ENST00000507376 AKR1C3P42330 323 aa5.25□□□□□ -1.57
COPS4-205ENST00000507376 RNASEKQ6P5S7 137 aaKnown RBP5.25□□□□□ -1.57
COPS4-205ENST00000507376 HIST1H2BAQ96A08 127 aa5.25□□□□□ -1.57
COPS4-205ENST00000507376 RPL39LQ96EH5 51 aaKnown RBP5.25□□□□□ -1.57
COPS4-205ENST00000507376 KRTAP4-1Q9BYQ7 146 aa5.25□□□□□ -1.57
COPS4-205ENST00000507376 A0A087X002 238 aa5.24□□□□□ -1.57
COPS4-205ENST00000507376 LOC107984640A0A0U1RRK4 108 aa5.24□□□□□ -1.57
COPS4-205ENST00000507376 CTXND1A0A1B0GTU2 59 aa5.24□□□□□ -1.57
COPS4-205ENST00000507376 A0A1B0GV50 99 aa5.24□□□□□ -1.57
COPS4-205ENST00000507376 INMT-MINDY4F8WBC2 141 aa5.24□□□□□ -1.57
COPS4-205ENST00000507376 SMIM17P0DL12 118 aa5.24□□□□□ -1.57
COPS4-205ENST00000507376 FGF6P10767 208 aa5.24□□□□□ -1.57
COPS4-205ENST00000507376 UBE2D1P51668 147 aa5.24□□□□□ -1.57
COPS4-205ENST00000507376 RPL7L1Q6DKI1 246 aaKnown RBP5.24□□□□□ -1.57
COPS4-205ENST00000507376 RASL11AQ6T310 242 aa5.24□□□□□ -1.57
COPS4-205ENST00000507376 FAM19A5Q7Z5A7 132 aaPredicted RBP5.24□□□□□ -1.57
COPS4-205ENST00000507376 PGLYRP4Q96LB8 373 aa5.24□□□□□ -1.57
COPS4-205ENST00000507376 A0A087WZ39 114 aa5.23□□□□□ -1.57
COPS4-205ENST00000507376 IGHV1-58A0A0C4DH39 117 aa5.23□□□□□ -1.57
COPS4-205ENST00000507376 LINC00959A0A1B0GUT2 108 aa5.23□□□□□ -1.57
COPS4-205ENST00000507376 XKRY2A2RUG3 117 aa5.23□□□□□ -1.57
COPS4-205ENST00000507376 MAP1LC3B2A6NCE7 125 aa5.23□□□□□ -1.57
COPS4-205ENST00000507376 CXCL1P09341 107 aa5.23□□□□□ -1.57
COPS4-205ENST00000507376 IGLC6P0CF74 106 aa5.23□□□□□ -1.57
COPS4-205ENST00000507376 NTF3P20783 257 aa5.23□□□□□ -1.57
COPS4-205ENST00000507376 FHITP49789 147 aa5.23□□□□□ -1.57
COPS4-205ENST00000507376 RPL24P83731 157 aaKnown RBP5.23□□□□□ -1.57
COPS4-205ENST00000507376 COTL1Q14019 142 aa5.23□□□□□ -1.57
COPS4-205ENST00000507376 CLLU1Q5K131 121 aa5.23□□□□□ -1.57
COPS4-205ENST00000507376 AMMECR1LQ6DCA0 310 aa5.23□□□□□ -1.57
COPS4-205ENST00000507376 C9orf62Q8N4C0 152 aa5.23□□□□□ -1.57
COPS4-205ENST00000507376 NUP35Q8NFH5 326 aa5.23□□□□□ -1.57
COPS4-205ENST00000507376 ENKURQ8TC29 256 aa5.23□□□□□ -1.57
COPS4-205ENST00000507376 MAP1LC3BQ9GZQ8 125 aa5.23□□□□□ -1.57
COPS4-205ENST00000507376 VCX2Q9H322 139 aa5.23□□□□□ -1.57
COPS4-205ENST00000507376 SSNA1O43805 119 aa5.22□□□□□ -1.57
COPS4-205ENST00000507376 PET100P0DJ07 73 aa5.22□□□□□ -1.57
COPS4-205ENST00000507376 EIF5AP63241 154 aaKnown RBP5.22□□□□□ -1.57
COPS4-205ENST00000507376 RNASE13Q5GAN3 156 aaKnown RBP5.22□□□□□ -1.57
COPS4-205ENST00000507376 ERASQ7Z444 233 aa5.22□□□□□ -1.57
COPS4-205ENST00000507376 OR5A1Q8NGJ0 315 aa5.22□□□□□ -1.57
COPS4-205ENST00000507376 TNFSF18Q9UNG2 199 aa5.22□□□□□ -1.57
COPS4-205ENST00000507376 H0Y8G0 127 aa5.21□□□□□ -1.58
COPS4-205ENST00000507376 APOMO95445 188 aa5.21□□□□□ -1.58
COPS4-205ENST00000507376 PRSS2P07478 247 aa5.21□□□□□ -1.58
COPS4-205ENST00000507376 FOXA3P55318 350 aaPredicted RBP5.21□□□□□ -1.58
COPS4-205ENST00000507376 TEX261Q6UWH6 196 aa5.21□□□□□ -1.58
COPS4-205ENST00000507376 GATD1Q8NB37 220 aa5.21□□□□□ -1.58
COPS4-205ENST00000507376 NIT2Q9NQR4 276 aa5.21□□□□□ -1.58
COPS4-205ENST00000507376 BCL2L11O43521 198 aa5.2□□□□□ -1.58
COPS4-205ENST00000507376 TAGLN2P37802 199 aaKnown RBP5.2□□□□□ -1.58
COPS4-205ENST00000507376 STOML3Q8TAV4 291 aa5.2□□□□□ -1.58
COPS4-205ENST00000507376 CAMK2N2Q96S95 79 aa5.2□□□□□ -1.58
COPS4-205ENST00000507376 RPP21Q9H633 154 aaKnown RBP5.2□□□□□ -1.58
COPS4-205ENST00000507376 ANAPC11Q9NYG5 84 aa5.2□□□□□ -1.58
COPS4-205ENST00000507376 MBP02144 154 aa5.19□□□□□ -1.58
COPS4-205ENST00000507376 APCSP02743 223 aa5.19□□□□□ -1.58
COPS4-205ENST00000507376 SERF2P84101 59 aa5.19□□□□□ -1.58
COPS4-205ENST00000507376 BAGE2Q86Y30 109 aa5.19□□□□□ -1.58
COPS4-205ENST00000507376 IGLV5-45A0A087WSX0 123 aa5.18□□□□□ -1.58
COPS4-205ENST00000507376 TRAV1-1A0A0B4J248 108 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms