RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 USP17L23D6RBM5 183 aa10.98□□□□□ -0.65
SNCA-209ENST00000506244 DGAT2L7PQ6IED9 249 aa10.98□□□□□ -0.65
SNCA-209ENST00000506244 KRTAP26-1Q6PEX3 210 aa10.97□□□□□ -0.65
SNCA-209ENST00000506244 CLRN3Q8NCR9 226 aa10.97□□□□□ -0.65
SNCA-209ENST00000506244 MAP1LC3AQ9H492 121 aa10.97□□□□□ -0.65
SNCA-209ENST00000506244 RPS10P5Q9NQ39 176 aa10.96□□□□□ -0.65
SNCA-209ENST00000506244 CSDC2Q9Y534 153 aaKnown RBP10.96□□□□□ -0.65
SNCA-209ENST00000506244 HERC2O95714 4834 aa10.96□□□□□ -0.66
SNCA-209ENST00000506244 RAB5AP20339 215 aa10.95□□□□□ -0.66
SNCA-209ENST00000506244 KRTAP10-1P60331 282 aa10.95□□□□□ -0.66
SNCA-209ENST00000506244 COX19Q49B96 90 aa10.95□□□□□ -0.66
SNCA-209ENST00000506244 ZNF664Q8N3J9 261 aa10.95□□□□□ -0.66
SNCA-209ENST00000506244 TIMM21Q9BVV7 248 aa10.95□□□□□ -0.66
SNCA-209ENST00000506244 SVBPQ8N300 66 aa10.94□□□□□ -0.66
SNCA-209ENST00000506244 CHCHD10Q8WYQ3 142 aaPredicted RBP10.94□□□□□ -0.66
SNCA-209ENST00000506244 CDC42SE2Q9NRR3 84 aa10.94□□□□□ -0.66
SNCA-209ENST00000506244 UBE2D4Q9Y2X8 147 aa10.94□□□□□ -0.66
SNCA-209ENST00000506244 PRSS47A8MTI9 375 aa10.93□□□□□ -0.66
SNCA-209ENST00000506244 SNAPINO95295 136 aa10.93□□□□□ -0.66
SNCA-209ENST00000506244 APOC3P02656 99 aa10.93□□□□□ -0.66
SNCA-209ENST00000506244 SPANXA1Q9NS26 97 aa10.93□□□□□ -0.66
SNCA-209ENST00000506244 RYR1P21817 5038 aa10.92□□□□□ -0.66
SNCA-209ENST00000506244 GAGE12HA6NDE8 117 aa10.92□□□□□ -0.66
SNCA-209ENST00000506244 MT-ND6P03923 174 aa10.92□□□□□ -0.66
SNCA-209ENST00000506244 SS18Q15532 418 aa10.92□□□□□ -0.66
SNCA-209ENST00000506244 CFAP161Q6P656 301 aa10.92□□□□□ -0.66
SNCA-209ENST00000506244 GNB1LQ9BYB4 327 aa10.92□□□□□ -0.66
SNCA-209ENST00000506244 APOBP04114 4563 aaKnown RBP10.92□□□□□ -0.66
SNCA-209ENST00000506244 HSPG2P98160 4391 aa10.91□□□□□ -0.66
SNCA-209ENST00000506244 LINC00959A0A1B0GUT2 108 aa10.91□□□□□ -0.66
SNCA-209ENST00000506244 K7EMI3 77 aa10.91□□□□□ -0.66
SNCA-209ENST00000506244 CCL25O15444 150 aa10.91□□□□□ -0.66
SNCA-209ENST00000506244 LOC389332A0A1B0GUA5 103 aa10.9□□□□□ -0.66
SNCA-209ENST00000506244 PRSS1P07477 247 aa10.9□□□□□ -0.66
SNCA-209ENST00000506244 Q8N8P6 123 aa10.9□□□□□ -0.66
SNCA-209ENST00000506244 NXT2Q9NPJ8 142 aaKnown RBP10.9□□□□□ -0.66
SNCA-209ENST00000506244 AP5S1Q9NUS5 200 aa10.9□□□□□ -0.66
SNCA-209ENST00000506244 hDV102S1A0JD36 115 aa10.89□□□□□ -0.67
SNCA-209ENST00000506244 XCL1P47992 114 aa10.89□□□□□ -0.67
SNCA-209ENST00000506244 RPL39P62891 51 aaKnown RBP10.89□□□□□ -0.67
SNCA-209ENST00000506244 Q6ZUT4 128 aa10.89□□□□□ -0.67
SNCA-209ENST00000506244 C1orf196B1AJZ1 125 aa10.88□□□□□ -0.67
SNCA-209ENST00000506244 IFI27P40305 119 aaPredicted RBP10.88□□□□□ -0.67
SNCA-209ENST00000506244 ORMDL2Q53FV1 153 aa10.88□□□□□ -0.67
SNCA-209ENST00000506244 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.87□□□□□ -0.67
SNCA-209ENST00000506244 CNBPP62633 177 aaKnown RBP10.87□□□□□ -0.67
SNCA-209ENST00000506244 MRPS36P82909 103 aaKnown RBP10.87□□□□□ -0.67
SNCA-209ENST00000506244 FOXI1Q12951 378 aa10.87□□□□□ -0.67
SNCA-209ENST00000506244 CD164L2Q6UWJ8 174 aa10.87□□□□□ -0.67
SNCA-209ENST00000506244 G0S2P27469 103 aa10.86□□□□□ -0.67
SNCA-209ENST00000506244 Q8N1X5 172 aa10.86□□□□□ -0.67
SNCA-209ENST00000506244 CYSLTR1Q9Y271 337 aa10.86□□□□□ -0.67
SNCA-209ENST00000506244 TRAV13-1A0A0B4J241 112 aa10.85□□□□□ -0.67
SNCA-209ENST00000506244 XGP55808 180 aa10.85□□□□□ -0.67
SNCA-209ENST00000506244 KIAA1644Q3SXP7 199 aa10.85□□□□□ -0.67
SNCA-209ENST00000506244 RNASE13Q5GAN3 156 aaKnown RBP10.85□□□□□ -0.67
SNCA-209ENST00000506244 Q6ZSA8 131 aa10.85□□□□□ -0.67
SNCA-209ENST00000506244 C15orf56Q8N910 161 aa10.85□□□□□ -0.67
SNCA-209ENST00000506244 PYGO1Q9Y3Y4 419 aa10.85□□□□□ -0.67
SNCA-209ENST00000506244 GVQW2A0A096LPI5 108 aaPredicted RBP10.84□□□□□ -0.67
SNCA-209ENST00000506244 IGHV1-58A0A0C4DH39 117 aa10.84□□□□□ -0.67
SNCA-209ENST00000506244 LINC01620Q4KN68 170 aa10.84□□□□□ -0.67
SNCA-209ENST00000506244 MRPL18Q9H0U6 180 aaKnown RBP10.84□□□□□ -0.67
SNCA-209ENST00000506244 IFITM10A6NMD0 228 aa10.83□□□□□ -0.68
SNCA-209ENST00000506244 FABP9Q0Z7S8 132 aa10.83□□□□□ -0.68
SNCA-209ENST00000506244 C2orf66Q6UXQ4 117 aa10.83□□□□□ -0.68
SNCA-209ENST00000506244 C9orf163Q8N9P6 203 aa10.83□□□□□ -0.68
SNCA-209ENST00000506244 COX7A2LO14548 114 aa10.82□□□□□ -0.68
SNCA-209ENST00000506244 NPSP0C0P6 89 aa10.82□□□□□ -0.68
SNCA-209ENST00000506244 MALP21145 153 aa10.82□□□□□ -0.68
SNCA-209ENST00000506244 Q6ZN92 141 aa10.82□□□□□ -0.68
SNCA-209ENST00000506244 PRSS3P2Q8NHM4 247 aa10.82□□□□□ -0.68
SNCA-209ENST00000506244 TMEM141Q96I45 108 aa10.82□□□□□ -0.68
SNCA-209ENST00000506244 TGIF2-C20orf24A0A0A6YYL0 155 aa10.81□□□□□ -0.68
SNCA-209ENST00000506244 HIGD2BQ4VC39 106 aa10.81□□□□□ -0.68
SNCA-209ENST00000506244 ALKBH7Q9BT30 221 aaPredicted RBP10.81□□□□□ -0.68
SNCA-209ENST00000506244 FAM30AQ9NZY2 134 aa10.81□□□□□ -0.68
SNCA-209ENST00000506244 IGLV4-3A0A075B6K6 122 aa10.8□□□□□ -0.68
SNCA-209ENST00000506244 IGHV3-64A0A075B6Q5 118 aa10.8□□□□□ -0.68
SNCA-209ENST00000506244 LINC01549A6NIU2 74 aa10.8□□□□□ -0.68
SNCA-209ENST00000506244 PAPPA-AS1Q5QFB9 102 aa10.8□□□□□ -0.68
SNCA-209ENST00000506244 TEX43Q6ZNM6 134 aa10.8□□□□□ -0.68
SNCA-209ENST00000506244 C2orf88Q9BSF0 95 aa10.8□□□□□ -0.68
SNCA-209ENST00000506244 PKIGQ9Y2B9 76 aa10.8□□□□□ -0.68
SNCA-209ENST00000506244 DNAH8Q96JB1 4490 aa10.8□□□□□ -0.68
SNCA-209ENST00000506244 APOMO95445 188 aa10.79□□□□□ -0.68
SNCA-209ENST00000506244 OPRPNQ99935 248 aaPredicted RBP10.79□□□□□ -0.68
SNCA-209ENST00000506244 TRAPPC1Q9Y5R8 145 aa10.79□□□□□ -0.68
SNCA-209ENST00000506244 EPM2AB3EWF7 344 aa10.78□□□□□ -0.68
SNCA-209ENST00000506244 ZNF561-AS1K7EIQ3 104 aa10.78□□□□□ -0.68
SNCA-209ENST00000506244 HAMPP81172 84 aa10.78□□□□□ -0.68
SNCA-209ENST00000506244 FA2HQ7L5A8 372 aa10.78□□□□□ -0.68
SNCA-209ENST00000506244 FAM104AQ969W3 186 aa10.78□□□□□ -0.68
SNCA-209ENST00000506244 CHAC1Q9BUX1 264 aa10.78□□□□□ -0.68
SNCA-209ENST00000506244 SMCO4Q9NRQ5 59 aa10.78□□□□□ -0.68
SNCA-209ENST00000506244 SCXQ7RTU7 201 aa10.77□□□□□ -0.69
SNCA-209ENST00000506244 TIMM17AQ99595 171 aa10.77□□□□□ -0.69
SNCA-209ENST00000506244 LINC01546A6NGU7 62 aa10.76□□□□□ -0.69
SNCA-209ENST00000506244 TOMM6Q96B49 74 aa10.76□□□□□ -0.69
SNCA-209ENST00000506244 FAM229AH3BQW9 127 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms