RNA–Protein interactions for RNA: ENST00000505944.5

NR1I3-221, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 865 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-221ENST00000505944 LELP1Q5T871 98 aa4.6□□□□□ -1.67
NR1I3-221ENST00000505944 ORMDL3Q8N138 153 aa4.6□□□□□ -1.67
NR1I3-221ENST00000505944 Q8N976 141 aa4.6□□□□□ -1.67
NR1I3-221ENST00000505944 Q9HAA7 133 aa4.6□□□□□ -1.67
NR1I3-221ENST00000505944 TRAV8-6A0A0B4J262 113 aa4.59□□□□□ -1.67
NR1I3-221ENST00000505944 IGKV3OR2-268A0A0C4DH90 116 aa4.59□□□□□ -1.67
NR1I3-221ENST00000505944 COLCA2A8K830 154 aa4.59□□□□□ -1.67
NR1I3-221ENST00000505944 ZNF561-AS1K7EIQ3 104 aa4.59□□□□□ -1.67
NR1I3-221ENST00000505944 HLA-DQA1P01909 254 aa4.59□□□□□ -1.67
NR1I3-221ENST00000505944 TRGC2P03986 189 aa4.59□□□□□ -1.67
NR1I3-221ENST00000505944 GCSHP23434 173 aa4.59□□□□□ -1.67
NR1I3-221ENST00000505944 POLR2KP53803 58 aaKnown RBP4.59□□□□□ -1.67
NR1I3-221ENST00000505944 RPL39P62891 51 aaKnown RBP4.59□□□□□ -1.67
NR1I3-221ENST00000505944 COTL1Q14019 142 aa4.59□□□□□ -1.67
NR1I3-221ENST00000505944 RNASE13Q5GAN3 156 aaKnown RBP4.59□□□□□ -1.67
NR1I3-221ENST00000505944 Q6ZRN7 208 aaPredicted RBP4.59□□□□□ -1.67
NR1I3-221ENST00000505944 NTN5Q8WTR8 489 aaPredicted RBP4.59□□□□□ -1.67
NR1I3-221ENST00000505944 TMEM243Q9BU79 118 aa4.59□□□□□ -1.67
NR1I3-221ENST00000505944 SMIM2Q9BVW6 85 aa4.59□□□□□ -1.67
NR1I3-221ENST00000505944 GNB1LQ9BYB4 327 aa4.59□□□□□ -1.67
NR1I3-221ENST00000505944 IGLV4-60A0A075B6I1 120 aa4.58□□□□□ -1.68
NR1I3-221ENST00000505944 TRBV25-1A0A075B6N4 114 aa4.58□□□□□ -1.68
NR1I3-221ENST00000505944 IGHV1-24A0A0C4DH33 117 aa4.58□□□□□ -1.68
NR1I3-221ENST00000505944 TRBV6-5A0A0K0K1A5 114 aa4.58□□□□□ -1.68
NR1I3-221ENST00000505944 I3L3M4 83 aa4.58□□□□□ -1.68
NR1I3-221ENST00000505944 RAB5AP20339 215 aa4.58□□□□□ -1.68
NR1I3-221ENST00000505944 FCER1GP30273 86 aa4.58□□□□□ -1.68
NR1I3-221ENST00000505944 IFI27P40305 119 aaPredicted RBP4.58□□□□□ -1.68
NR1I3-221ENST00000505944 PMCHL1Q16048 86 aa4.58□□□□□ -1.68
NR1I3-221ENST00000505944 SH2D6Q7Z4S9 175 aa4.58□□□□□ -1.68
NR1I3-221ENST00000505944 NIT1Q86X76 327 aa4.58□□□□□ -1.68
NR1I3-221ENST00000505944 ALKBH7Q9BT30 221 aaPredicted RBP4.58□□□□□ -1.68
NR1I3-221ENST00000505944 CHCHD7Q9BUK0 85 aa4.58□□□□□ -1.68
NR1I3-221ENST00000505944 MAP1LC3AQ9H492 121 aa4.58□□□□□ -1.68
NR1I3-221ENST00000505944 A0A087WTM6 91 aa4.57□□□□□ -1.68
NR1I3-221ENST00000505944 A0A087WX48 190 aa4.57□□□□□ -1.68
NR1I3-221ENST00000505944 TRBV27A0A0K0K1C4 114 aa4.57□□□□□ -1.68
NR1I3-221ENST00000505944 VCYO14598 125 aa4.57□□□□□ -1.68
NR1I3-221ENST00000505944 UBE2L6O14933 153 aa4.57□□□□□ -1.68
NR1I3-221ENST00000505944 ANGP03950 147 aaKnown RBP4.57□□□□□ -1.68
NR1I3-221ENST00000505944 FUSP35637 526 aaKnown RBP eCLIP4.57□□□□□ -1.68
NR1I3-221ENST00000505944 RBX1P62877 108 aa4.57□□□□□ -1.68
NR1I3-221ENST00000505944 ZC2HC1BQ5TFG8 222 aa4.57□□□□□ -1.68
NR1I3-221ENST00000505944 RNASEKQ6P5S7 137 aaKnown RBP4.57□□□□□ -1.68
NR1I3-221ENST00000505944 OPRPNQ99935 248 aaPredicted RBP4.57□□□□□ -1.68
NR1I3-221ENST00000505944 KRTAP4-7Q9BYR0 210 aa4.57□□□□□ -1.68
NR1I3-221ENST00000505944 KLK12Q9UKR0 248 aa4.57□□□□□ -1.68
NR1I3-221ENST00000505944 IGLV10-54A0A075B6I4 117 aa4.56□□□□□ -1.68
NR1I3-221ENST00000505944 SCGB1D1O95968 90 aa4.56□□□□□ -1.68
NR1I3-221ENST00000505944 OXTP01178 125 aa4.56□□□□□ -1.68
NR1I3-221ENST00000505944 PPBPP02775 128 aa4.56□□□□□ -1.68
NR1I3-221ENST00000505944 MT-ND6P03923 174 aa4.56□□□□□ -1.68
NR1I3-221ENST00000505944 DNAH10OSP0CZ25 163 aa4.56□□□□□ -1.68
NR1I3-221ENST00000505944 FGF6P10767 208 aa4.56□□□□□ -1.68
NR1I3-221ENST00000505944 S100A1P23297 94 aa4.56□□□□□ -1.68
NR1I3-221ENST00000505944 TIRAPP58753 221 aa4.56□□□□□ -1.68
NR1I3-221ENST00000505944 KRTAP10-1P60331 282 aa4.56□□□□□ -1.68
NR1I3-221ENST00000505944 C10orf126Q8N4M7 172 aa4.56□□□□□ -1.68
NR1I3-221ENST00000505944 C18orf32Q8TCD1 76 aa4.56□□□□□ -1.68
NR1I3-221ENST00000505944 UBE2WQ96B02 151 aa4.56□□□□□ -1.68
NR1I3-221ENST00000505944 C20orf78Q9BR46 151 aa4.56□□□□□ -1.68
NR1I3-221ENST00000505944 HMCN2Q8NDA2 5059 aa4.56□□□□□ -1.68
NR1I3-221ENST00000505944 PHOX2AO14813 284 aa4.55□□□□□ -1.68
NR1I3-221ENST00000505944 LECT2O14960 151 aa4.55□□□□□ -1.68
NR1I3-221ENST00000505944 ESDP10768 282 aa4.55□□□□□ -1.68
NR1I3-221ENST00000505944 LINC00310P59036 64 aa4.55□□□□□ -1.68
NR1I3-221ENST00000505944 LINC01556Q5JQF7 62 aa4.55□□□□□ -1.68
NR1I3-221ENST00000505944 AMMECR1LQ6DCA0 310 aa4.55□□□□□ -1.68
NR1I3-221ENST00000505944 Q6ZUT4 128 aa4.55□□□□□ -1.68
NR1I3-221ENST00000505944 FA2HQ7L5A8 372 aa4.55□□□□□ -1.68
NR1I3-221ENST00000505944 LINC00269Q8N2A0 174 aa4.55□□□□□ -1.68
NR1I3-221ENST00000505944 Q8N8P6 123 aa4.55□□□□□ -1.68
NR1I3-221ENST00000505944 C20orf203Q8NBC4 194 aa4.55□□□□□ -1.68
NR1I3-221ENST00000505944 PRSS3P2Q8NHM4 247 aa4.55□□□□□ -1.68
NR1I3-221ENST00000505944 URB1-AS1Q96HZ7 61 aa4.55□□□□□ -1.68
NR1I3-221ENST00000505944 KIR2DL4Q99706 377 aa4.55□□□□□ -1.68
NR1I3-221ENST00000505944 IGLV5-52A0A0A0MRZ9 124 aa4.54□□□□□ -1.68
NR1I3-221ENST00000505944 PPP1R17O96001 155 aa4.54□□□□□ -1.68
NR1I3-221ENST00000505944 SMR3BP02814 79 aaPredicted RBP4.54□□□□□ -1.68
NR1I3-221ENST00000505944 ENHOQ6UWT2 76 aa4.54□□□□□ -1.68
NR1I3-221ENST00000505944 FAT3Q8TDW7 4589 aa4.54□□□□□ -1.68
NR1I3-221ENST00000505944 IGKV2D-24A0A075B6R9 120 aa4.53□□□□□ -1.68
NR1I3-221ENST00000505944 NUPR1O60356 82 aa4.53□□□□□ -1.68
NR1I3-221ENST00000505944 RPL32P62910 135 aaKnown RBP4.53□□□□□ -1.68
NR1I3-221ENST00000505944 WFDC2Q14508 124 aa4.53□□□□□ -1.68
NR1I3-221ENST00000505944 LAGE3Q14657 143 aa4.53□□□□□ -1.68
NR1I3-221ENST00000505944 COX19Q49B96 90 aa4.53□□□□□ -1.68
NR1I3-221ENST00000505944 BAGE3Q86Y29 109 aa4.53□□□□□ -1.68
NR1I3-221ENST00000505944 OR5A1Q8NGJ0 315 aa4.53□□□□□ -1.68
NR1I3-221ENST00000505944 FAM104AQ969W3 186 aa4.53□□□□□ -1.68
NR1I3-221ENST00000505944 NXT2Q9NPJ8 142 aaKnown RBP4.53□□□□□ -1.68
NR1I3-221ENST00000505944 LAMTOR2Q9Y2Q5 125 aa4.53□□□□□ -1.68
NR1I3-221ENST00000505944 UBE2D4Q9Y2X8 147 aa4.53□□□□□ -1.68
NR1I3-221ENST00000505944 A0A096LNJ9 63 aa4.52□□□□□ -1.69
NR1I3-221ENST00000505944 TRAV13-1A0A0B4J241 112 aa4.52□□□□□ -1.69
NR1I3-221ENST00000505944 IBA57-AS1B1ANH7 110 aa4.52□□□□□ -1.69
NR1I3-221ENST00000505944 PSCAO43653 123 aa4.52□□□□□ -1.69
NR1I3-221ENST00000505944 HIST1H2BKO60814 126 aa4.52□□□□□ -1.69
NR1I3-221ENST00000505944 SERF1AO75920 110 aa4.52□□□□□ -1.69
NR1I3-221ENST00000505944 CRPP02741 224 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms