RNA–Protein interactions for RNA: ENST00000505886.5

PDLIM3-206, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4

Gene PDLIM3, Length 571 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-206ENST00000505886 COX19Q49B96 90 aa10.19□□□□□ -0.78
PDLIM3-206ENST00000505886 C10orf91Q5T1B1 145 aa10.19□□□□□ -0.78
PDLIM3-206ENST00000505886 CLPSL2Q6UWE3 100 aa10.19□□□□□ -0.78
PDLIM3-206ENST00000505886 ZNF664Q8N3J9 261 aa10.19□□□□□ -0.78
PDLIM3-206ENST00000505886 CDC42SE2Q9NRR3 84 aa10.19□□□□□ -0.78
PDLIM3-206ENST00000505886 DYNC1H1Q14204 4646 aaKnown RBP10.19□□□□□ -0.78
PDLIM3-206ENST00000505886 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.18□□□□□ -0.78
PDLIM3-206ENST00000505886 ADCYAP1P18509 176 aa10.18□□□□□ -0.78
PDLIM3-206ENST00000505886 RAB5AP20339 215 aa10.18□□□□□ -0.78
PDLIM3-206ENST00000505886 CNBPP62633 177 aaKnown RBP10.18□□□□□ -0.78
PDLIM3-206ENST00000505886 SS18Q15532 418 aa10.18□□□□□ -0.78
PDLIM3-206ENST00000505886 Q6ZSA8 131 aa10.18□□□□□ -0.78
PDLIM3-206ENST00000505886 PRELID3AQ96N28 172 aa10.18□□□□□ -0.78
PDLIM3-206ENST00000505886 CARHSP1Q9Y2V2 147 aaKnown RBP10.18□□□□□ -0.78
PDLIM3-206ENST00000505886 IGLV10-54A0A075B6I4 117 aa10.17□□□□□ -0.78
PDLIM3-206ENST00000505886 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.17□□□□□ -0.78
PDLIM3-206ENST00000505886 C1orf196B1AJZ1 125 aa10.17□□□□□ -0.78
PDLIM3-206ENST00000505886 G0S2P27469 103 aa10.17□□□□□ -0.78
PDLIM3-206ENST00000505886 SPANXA1Q9NS26 97 aa10.17□□□□□ -0.78
PDLIM3-206ENST00000505886 AP5S1Q9NUS5 200 aa10.17□□□□□ -0.78
PDLIM3-206ENST00000505886 XGP55808 180 aa10.16□□□□□ -0.78
PDLIM3-206ENST00000505886 DEFB104AQ8WTQ1 72 aa10.16□□□□□ -0.78
PDLIM3-206ENST00000505886 CHCHD10Q8WYQ3 142 aaPredicted RBP10.16□□□□□ -0.78
PDLIM3-206ENST00000505886 PKIGQ9Y2B9 76 aa10.16□□□□□ -0.78
PDLIM3-206ENST00000505886 UBE2D4Q9Y2X8 147 aa10.16□□□□□ -0.78
PDLIM3-206ENST00000505886 LRP1BQ9NZR2 4599 aa10.16□□□□□ -0.78
PDLIM3-206ENST00000505886 LINC00959A0A1B0GUT2 108 aa10.15□□□□□ -0.78
PDLIM3-206ENST00000505886 PRSS1P07477 247 aa10.15□□□□□ -0.78
PDLIM3-206ENST00000505886 NPSP0C0P6 89 aa10.15□□□□□ -0.78
PDLIM3-206ENST00000505886 NDUFA5Q16718 116 aa10.15□□□□□ -0.78
PDLIM3-206ENST00000505886 C9orf163Q8N9P6 203 aa10.15□□□□□ -0.78
PDLIM3-206ENST00000505886 MAP1LC3AQ9H492 121 aa10.15□□□□□ -0.78
PDLIM3-206ENST00000505886 NPYP01303 97 aa10.14□□□□□ -0.79
PDLIM3-206ENST00000505886 MRPS36P82909 103 aaKnown RBP10.14□□□□□ -0.79
PDLIM3-206ENST00000505886 CD164L2Q6UWJ8 174 aa10.14□□□□□ -0.79
PDLIM3-206ENST00000505886 GNB1LQ9BYB4 327 aa10.14□□□□□ -0.79
PDLIM3-206ENST00000505886 NXT2Q9NPJ8 142 aaKnown RBP10.14□□□□□ -0.79
PDLIM3-206ENST00000505886 hDV102S1A0JD36 115 aa10.13□□□□□ -0.79
PDLIM3-206ENST00000505886 GAGE12HA6NDE8 117 aa10.13□□□□□ -0.79
PDLIM3-206ENST00000505886 LINC01549A6NIU2 74 aa10.13□□□□□ -0.79
PDLIM3-206ENST00000505886 MT-ND6P03923 174 aa10.13□□□□□ -0.79
PDLIM3-206ENST00000505886 FUSP35637 526 aaKnown RBP eCLIP10.13□□□□□ -0.79
PDLIM3-206ENST00000505886 PYGO1Q9Y3Y4 419 aa10.13□□□□□ -0.79
PDLIM3-206ENST00000505886 EPM2AB3EWF7 344 aa10.12□□□□□ -0.79
PDLIM3-206ENST00000505886 FAM229AH3BQW9 127 aa10.12□□□□□ -0.79
PDLIM3-206ENST00000505886 ORMDL2Q53FV1 153 aa10.12□□□□□ -0.79
PDLIM3-206ENST00000505886 GVQW2A0A096LPI5 108 aaPredicted RBP10.11□□□□□ -0.79
PDLIM3-206ENST00000505886 IGKV3OR2-268A0A0C4DH90 116 aa10.11□□□□□ -0.79
PDLIM3-206ENST00000505886 FOXI1Q12951 378 aa10.11□□□□□ -0.79
PDLIM3-206ENST00000505886 SVBPQ8N300 66 aa10.11□□□□□ -0.79
PDLIM3-206ENST00000505886 Q8N8P6 123 aa10.11□□□□□ -0.79
PDLIM3-206ENST00000505886 DNAH5Q8TE73 4624 aa10.11□□□□□ -0.79
PDLIM3-206ENST00000505886 RYR1P21817 5038 aa10.11□□□□□ -0.79
PDLIM3-206ENST00000505886 IGHV1-58A0A0C4DH39 117 aa10.1□□□□□ -0.79
PDLIM3-206ENST00000505886 SNAPINO95295 136 aa10.1□□□□□ -0.79
PDLIM3-206ENST00000505886 IFI27P40305 119 aaPredicted RBP10.1□□□□□ -0.79
PDLIM3-206ENST00000505886 CHAC1Q9BUX1 264 aa10.1□□□□□ -0.79
PDLIM3-206ENST00000505886 IGHV3-64A0A075B6Q5 118 aa10.09□□□□□ -0.79
PDLIM3-206ENST00000505886 XCL1P47992 114 aa10.09□□□□□ -0.79
PDLIM3-206ENST00000505886 PAPPA-AS1Q5QFB9 102 aa10.09□□□□□ -0.79
PDLIM3-206ENST00000505886 C15orf56Q8N910 161 aa10.08□□□□□ -0.8
PDLIM3-206ENST00000505886 CYSLTR1Q9Y271 337 aa10.08□□□□□ -0.8
PDLIM3-206ENST00000505886 COX7A2LO14548 114 aa10.07□□□□□ -0.8
PDLIM3-206ENST00000505886 APOMO95445 188 aa10.07□□□□□ -0.8
PDLIM3-206ENST00000505886 KRTAP4-5Q9BYR2 181 aa10.07□□□□□ -0.8
PDLIM3-206ENST00000505886 RPS10P5Q9NQ39 176 aa10.07□□□□□ -0.8
PDLIM3-206ENST00000505886 FAM30AQ9NZY2 134 aa10.07□□□□□ -0.8
PDLIM3-206ENST00000505886 F8WDY8 70 aa10.06□□□□□ -0.8
PDLIM3-206ENST00000505886 MALP21145 153 aa10.06□□□□□ -0.8
PDLIM3-206ENST00000505886 SDIM1Q6ZPB5 146 aa10.06□□□□□ -0.8
PDLIM3-206ENST00000505886 HSPG2P98160 4391 aa10.05□□□□□ -0.8
PDLIM3-206ENST00000505886 ZNF561-AS1K7EIQ3 104 aa10.05□□□□□ -0.8
PDLIM3-206ENST00000505886 PLA2G1BP04054 148 aaKnown RBP10.05□□□□□ -0.8
PDLIM3-206ENST00000505886 RPL39P62891 51 aaKnown RBP10.05□□□□□ -0.8
PDLIM3-206ENST00000505886 Q6ZN92 141 aa10.05□□□□□ -0.8
PDLIM3-206ENST00000505886 Q6ZUT4 128 aa10.05□□□□□ -0.8
PDLIM3-206ENST00000505886 TMEM141Q96I45 108 aa10.05□□□□□ -0.8
PDLIM3-206ENST00000505886 LINC00474Q9P2X8 69 aa10.05□□□□□ -0.8
PDLIM3-206ENST00000505886 TRAV13-1A0A0B4J241 112 aa10.04□□□□□ -0.8
PDLIM3-206ENST00000505886 APOC3P02656 99 aa10.04□□□□□ -0.8
PDLIM3-206ENST00000505886 CIRBPQ14011 172 aaKnown RBP10.04□□□□□ -0.8
PDLIM3-206ENST00000505886 LOC389332A0A1B0GUA5 103 aa10.03□□□□□ -0.8
PDLIM3-206ENST00000505886 Q5VSD8 79 aa10.03□□□□□ -0.8
PDLIM3-206ENST00000505886 C2orf66Q6UXQ4 117 aa10.03□□□□□ -0.8
PDLIM3-206ENST00000505886 SCXQ7RTU7 201 aa10.03□□□□□ -0.8
PDLIM3-206ENST00000505886 OR10D4PQ8NGN7 298 aa10.03□□□□□ -0.8
PDLIM3-206ENST00000505886 C2orf88Q9BSF0 95 aa10.03□□□□□ -0.8
PDLIM3-206ENST00000505886 APOBP04114 4563 aaKnown RBP10.02□□□□□ -0.81
PDLIM3-206ENST00000505886 LINC01546A6NGU7 62 aa10.02□□□□□ -0.81
PDLIM3-206ENST00000505886 IFITM10A6NMD0 228 aa10.02□□□□□ -0.81
PDLIM3-206ENST00000505886 SEC11AP67812 179 aa10.02□□□□□ -0.81
PDLIM3-206ENST00000505886 LINC01620Q4KN68 170 aa10.02□□□□□ -0.81
PDLIM3-206ENST00000505886 TEX43Q6ZNM6 134 aa10.02□□□□□ -0.81
PDLIM3-206ENST00000505886 PRSS3P2Q8NHM4 247 aa10.02□□□□□ -0.81
PDLIM3-206ENST00000505886 C2orf48Q96LS8 159 aa10.02□□□□□ -0.81
PDLIM3-206ENST00000505886 PCLOQ9Y6V0 5065 aa10.01□□□□□ -0.81
PDLIM3-206ENST00000505886 IGHV3OR16-9A0A0B4J2B5 98 aa10.01□□□□□ -0.81
PDLIM3-206ENST00000505886 LINC01561Q8N1V8 128 aa10.01□□□□□ -0.81
PDLIM3-206ENST00000505886 CIRBP-AS1Q8TBR5 109 aa10.01□□□□□ -0.81
PDLIM3-206ENST00000505886 TIMM17AQ99595 171 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms