RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 UBE2G1P62253 170 aa0.47□□□□□ -2.33
TOPBP1-204ENST00000505804 SPINK13Q1W4C9 94 aa0.47□□□□□ -2.33
TOPBP1-204ENST00000505804 MEIG1Q5JSS6 88 aa0.47□□□□□ -2.33
TOPBP1-204ENST00000505804 RPL7L1Q6DKI1 246 aaKnown RBP0.47□□□□□ -2.33
TOPBP1-204ENST00000505804 PPP1R1CQ8WVI7 109 aa0.47□□□□□ -2.33
TOPBP1-204ENST00000505804 LSM10Q969L4 123 aaKnown RBP0.47□□□□□ -2.33
TOPBP1-204ENST00000505804 SEC11CQ9BY50 192 aa0.47□□□□□ -2.33
TOPBP1-204ENST00000505804 AGPAT4-IT1Q9H0P7 198 aa0.47□□□□□ -2.33
TOPBP1-204ENST00000505804 NAA60Q9H7X0 242 aa0.47□□□□□ -2.33
TOPBP1-204ENST00000505804 RPRMQ9NS64 109 aa0.47□□□□□ -2.33
TOPBP1-204ENST00000505804 TMEM14BQ9NUH8 114 aa0.47□□□□□ -2.33
TOPBP1-204ENST00000505804 COA4Q9NYJ1 87 aa0.47□□□□□ -2.33
TOPBP1-204ENST00000505804 NIPBLQ6KC79 2804 aaeCLIP0.47□□□□□ -2.33
TOPBP1-204ENST00000505804 MED12Q93074 2177 aa0.47□□□□□ -2.33
TOPBP1-204ENST00000505804 DMXL1Q9Y485 3027 aa0.47□□□□□ -2.33
TOPBP1-204ENST00000505804 MYOM2P54296 1465 aa0.47□□□□□ -2.33
TOPBP1-204ENST00000505804 APCP25054 2843 aa0.46□□□□□ -2.34
TOPBP1-204ENST00000505804 MED13LQ71F56 2210 aa0.46□□□□□ -2.34
TOPBP1-204ENST00000505804 DMXL2Q8TDJ6 3036 aa0.46□□□□□ -2.34
TOPBP1-204ENST00000505804 MYCBP2O75592 4640 aa0.46□□□□□ -2.34
TOPBP1-204ENST00000505804 TRBV10-3A0A0K0K1G6 114 aa0.46□□□□□ -2.34
TOPBP1-204ENST00000505804 LINC00587B1AMM8 73 aa0.46□□□□□ -2.34
TOPBP1-204ENST00000505804 IFNA17P01571 189 aa0.46□□□□□ -2.34
TOPBP1-204ENST00000505804 KRTAP2-3P0C7H8 128 aa0.46□□□□□ -2.34
TOPBP1-204ENST00000505804 CBLN1P23435 193 aa0.46□□□□□ -2.34
TOPBP1-204ENST00000505804 RPL37P61927 97 aaKnown RBP0.46□□□□□ -2.34
TOPBP1-204ENST00000505804 KRTAP21-1Q3LI58 79 aa0.46□□□□□ -2.34
TOPBP1-204ENST00000505804 S100A7L2Q5SY68 101 aa0.46□□□□□ -2.34
TOPBP1-204ENST00000505804 Q6AWC8 147 aa0.46□□□□□ -2.34
TOPBP1-204ENST00000505804 C20orf197Q8N268 126 aa0.46□□□□□ -2.34
TOPBP1-204ENST00000505804 DSCR8Q96T75 97 aa0.46□□□□□ -2.34
TOPBP1-204ENST00000505804 C2orf88Q9BSF0 95 aa0.46□□□□□ -2.34
TOPBP1-204ENST00000505804 KRTAP2-4Q9BYR9 128 aa0.46□□□□□ -2.34
TOPBP1-204ENST00000505804 C10orf95Q9H7T3 257 aa0.46□□□□□ -2.34
TOPBP1-204ENST00000505804 BET1LQ9NYM9 111 aa0.46□□□□□ -2.34
TOPBP1-204ENST00000505804 SERP1Q9Y6X1 66 aa0.46□□□□□ -2.34
TOPBP1-204ENST00000505804 ABCA1O95477 2261 aa0.46□□□□□ -2.34
TOPBP1-204ENST00000505804 ABCC10Q5T3U5 1492 aa0.46□□□□□ -2.34
TOPBP1-204ENST00000505804 IFT140Q96RY7 1462 aa0.46□□□□□ -2.34
TOPBP1-204ENST00000505804 SACSQ9NZJ4 4579 aa0.46□□□□□ -2.34
TOPBP1-204ENST00000505804 TET3O43151 1660 aa0.46□□□□□ -2.34
TOPBP1-204ENST00000505804 NBASA2RRP1 2371 aa0.46□□□□□ -2.34
TOPBP1-204ENST00000505804 CASKIN1Q8WXD9 1431 aa0.46□□□□□ -2.34
TOPBP1-204ENST00000505804 MAP1AP78559 2803 aaPredicted RBP0.46□□□□□ -2.34
TOPBP1-204ENST00000505804 LAMA5O15230 3695 aa0.45□□□□□ -2.34
TOPBP1-204ENST00000505804 NRKQ7Z2Y5 1582 aa0.45□□□□□ -2.34
TOPBP1-204ENST00000505804 KNTC1P50748 2209 aa0.45□□□□□ -2.34
TOPBP1-204ENST00000505804 EHBP1L1Q8N3D4 1523 aa0.45□□□□□ -2.34
TOPBP1-204ENST00000505804 IFT172Q9UG01 1749 aa0.45□□□□□ -2.34
TOPBP1-204ENST00000505804 A0A087WTM6 91 aa0.45□□□□□ -2.34
TOPBP1-204ENST00000505804 SPAARA0A1B0GVQ0 90 aa0.45□□□□□ -2.34
TOPBP1-204ENST00000505804 A6NIN4 97 aa0.45□□□□□ -2.34
TOPBP1-204ENST00000505804 MCRIP1C9JLW8 97 aa0.45□□□□□ -2.34
TOPBP1-204ENST00000505804 ZNF137PP52743 207 aa0.45□□□□□ -2.34
TOPBP1-204ENST00000505804 FXYD6P3P58550 94 aa0.45□□□□□ -2.34
TOPBP1-204ENST00000505804 ELOF1P60002 83 aaKnown RBP0.45□□□□□ -2.34
TOPBP1-204ENST00000505804 LRP2P98164 4655 aa0.45□□□□□ -2.34
TOPBP1-204ENST00000505804 C12orf73Q69YU5 71 aa0.45□□□□□ -2.34
TOPBP1-204ENST00000505804 Q8N8P6 123 aa0.45□□□□□ -2.34
TOPBP1-204ENST00000505804 SPTSSBQ8NFR3 76 aa0.45□□□□□ -2.34
TOPBP1-204ENST00000505804 COX7B2Q8TF08 81 aa0.45□□□□□ -2.34
TOPBP1-204ENST00000505804 PP6455Q8WZ26 134 aa0.45□□□□□ -2.34
TOPBP1-204ENST00000505804 PXDNQ92626 1479 aa0.45□□□□□ -2.34
TOPBP1-204ENST00000505804 SVEP1Q4LDE5 3571 aa0.45□□□□□ -2.34
TOPBP1-204ENST00000505804 COL7A1Q02388 2944 aa0.44□□□□□ -2.34
TOPBP1-204ENST00000505804 DMDP11532 3685 aa0.44□□□□□ -2.34
TOPBP1-204ENST00000505804 DSPP15924 2871 aaKnown RBP0.44□□□□□ -2.34
TOPBP1-204ENST00000505804 MRC2Q9UBG0 1479 aa0.44□□□□□ -2.34
TOPBP1-204ENST00000505804 LRP1BQ9NZR2 4599 aa0.44□□□□□ -2.34
TOPBP1-204ENST00000505804 F8P00451 2351 aa0.44□□□□□ -2.34
TOPBP1-204ENST00000505804 PSME4Q14997 1843 aa0.44□□□□□ -2.34
TOPBP1-204ENST00000505804 A0A096LNT2 108 aa0.44□□□□□ -2.34
TOPBP1-204ENST00000505804 CLPSL1A2RUU4 121 aa0.44□□□□□ -2.34
TOPBP1-204ENST00000505804 RBAKDNA6NC62 111 aa0.44□□□□□ -2.34
TOPBP1-204ENST00000505804 MIF4GDA9UHW6 222 aaKnown RBP0.44□□□□□ -2.34
TOPBP1-204ENST00000505804 AKAIN1P0CW23 69 aa0.44□□□□□ -2.34
TOPBP1-204ENST00000505804 CCL8P80075 99 aa0.44□□□□□ -2.34
TOPBP1-204ENST00000505804 SSBP1Q04837 148 aaKnown RBP0.44□□□□□ -2.34
TOPBP1-204ENST00000505804 INSL4Q14641 139 aa0.44□□□□□ -2.34
TOPBP1-204ENST00000505804 Q56UQ5 140 aa0.44□□□□□ -2.34
TOPBP1-204ENST00000505804 SPINK9Q5DT21 86 aa0.44□□□□□ -2.34
TOPBP1-204ENST00000505804 C6orf52Q5T4I8 152 aa0.44□□□□□ -2.34
TOPBP1-204ENST00000505804 FAM74A4Q5TZK3 123 aa0.44□□□□□ -2.34
TOPBP1-204ENST00000505804 ZNF818PQ6ZRF7 136 aa0.44□□□□□ -2.34
TOPBP1-204ENST00000505804 C4orf33Q8N1A6 199 aa0.44□□□□□ -2.34
TOPBP1-204ENST00000505804 TMEM203Q969S6 136 aa0.44□□□□□ -2.34
TOPBP1-204ENST00000505804 SCN3BQ9NY72 215 aa0.44□□□□□ -2.34
TOPBP1-204ENST00000505804 ALKQ9UM73 1620 aa0.44□□□□□ -2.34
TOPBP1-204ENST00000505804 PTPRQQ9UMZ3 2332 aa0.44□□□□□ -2.34
TOPBP1-204ENST00000505804 LAMC3Q9Y6N6 1575 aa0.44□□□□□ -2.34
TOPBP1-204ENST00000505804 ABCA3Q99758 1704 aa0.44□□□□□ -2.34
TOPBP1-204ENST00000505804 KTN1Q86UP2 1357 aaKnown RBP0.44□□□□□ -2.34
TOPBP1-204ENST00000505804 F5P12259 2224 aa0.44□□□□□ -2.34
TOPBP1-204ENST00000505804 KDM5AP29375 1690 aaKnown RBP0.43□□□□□ -2.34
TOPBP1-204ENST00000505804 CUBNO60494 3623 aa0.43□□□□□ -2.34
TOPBP1-204ENST00000505804 RALGAPBQ86X10 1494 aa0.43□□□□□ -2.34
TOPBP1-204ENST00000505804 DCHS2Q6V1P9 2916 aa0.43□□□□□ -2.34
TOPBP1-204ENST00000505804 TRIOO75962 3097 aa0.43□□□□□ -2.34
TOPBP1-204ENST00000505804 HIVEP1P15822 2718 aa0.43□□□□□ -2.34
TOPBP1-204ENST00000505804 CENPEQ02224 2701 aa0.43□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms