RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 FGF6P10767 208 aa5.67□□□□□ -1.5
COL4A5-208ENST00000505728 HERVK_113P61574 105 aa5.67□□□□□ -1.5
COL4A5-208ENST00000505728 NTM-AS1Q6ZSK4 140 aa5.67□□□□□ -1.5
COL4A5-208ENST00000505728 SBSPONQ8IVN8 264 aa5.67□□□□□ -1.5
COL4A5-208ENST00000505728 FAM104AQ969W3 186 aa5.67□□□□□ -1.5
COL4A5-208ENST00000505728 OPRPNQ99935 248 aaPredicted RBP5.67□□□□□ -1.5
COL4A5-208ENST00000505728 C2orf88Q9BSF0 95 aa5.67□□□□□ -1.5
COL4A5-208ENST00000505728 SNHG12Q9BXW3 62 aa5.67□□□□□ -1.5
COL4A5-208ENST00000505728 LOC100131303A0A0U1RQF7 123 aa5.66□□□□□ -1.5
COL4A5-208ENST00000505728 ATP5G1P05496 136 aa5.66□□□□□ -1.5
COL4A5-208ENST00000505728 NMUP48645 174 aa5.66□□□□□ -1.5
COL4A5-208ENST00000505728 DGAT2L7PQ6IED9 249 aa5.66□□□□□ -1.5
COL4A5-208ENST00000505728 TMEM243Q9BU79 118 aa5.66□□□□□ -1.5
COL4A5-208ENST00000505728 TRBV25-1A0A075B6N4 114 aa5.65□□□□□ -1.5
COL4A5-208ENST00000505728 IGKV2D-26A0A0A0MRZ7 120 aa5.65□□□□□ -1.5
COL4A5-208ENST00000505728 E9PLD3 99 aa5.65□□□□□ -1.5
COL4A5-208ENST00000505728 DEFB4AO15263 64 aa5.65□□□□□ -1.5
COL4A5-208ENST00000505728 PAX4O43316 350 aa5.65□□□□□ -1.5
COL4A5-208ENST00000505728 GYPEP15421 78 aa5.65□□□□□ -1.5
COL4A5-208ENST00000505728 PCP2Q8IVA1 136 aa5.65□□□□□ -1.5
COL4A5-208ENST00000505728 ATP6V0E2Q8NHE4 81 aa5.65□□□□□ -1.5
COL4A5-208ENST00000505728 MRAPQ8TCY5 172 aa5.65□□□□□ -1.5
COL4A5-208ENST00000505728 HIGD1BQ9P298 99 aa5.65□□□□□ -1.5
COL4A5-208ENST00000505728 TRBV6-8A0A0A6YYG3 113 aa5.64□□□□□ -1.51
COL4A5-208ENST00000505728 A0A0J9YXV3 536 aa5.64□□□□□ -1.51
COL4A5-208ENST00000505728 TINCRA0A1B0GVN0 87 aa5.64□□□□□ -1.51
COL4A5-208ENST00000505728 UBE2L6O14933 153 aa5.64□□□□□ -1.51
COL4A5-208ENST00000505728 EREGO14944 169 aa5.64□□□□□ -1.51
COL4A5-208ENST00000505728 ZNF25P17030 456 aaPredicted RBP5.64□□□□□ -1.51
COL4A5-208ENST00000505728 TIRAPP58753 221 aa5.64□□□□□ -1.51
COL4A5-208ENST00000505728 CEMP1Q6PRD7 247 aaPredicted RBP5.64□□□□□ -1.51
COL4A5-208ENST00000505728 C2orf91Q6ZV80 131 aa5.64□□□□□ -1.51
COL4A5-208ENST00000505728 SH2D6Q7Z4S9 175 aa5.64□□□□□ -1.51
COL4A5-208ENST00000505728 TMEM101Q96IK0 257 aa5.64□□□□□ -1.51
COL4A5-208ENST00000505728 C11orf68Q9H3H3 251 aaKnown RBP5.64□□□□□ -1.51
COL4A5-208ENST00000505728 CELA1Q9UNI1 258 aa5.64□□□□□ -1.51
COL4A5-208ENST00000505728 TRAV26-1A0A087WT03 109 aa5.63□□□□□ -1.51
COL4A5-208ENST00000505728 MYMXA0A1B0GTQ4 84 aa5.63□□□□□ -1.51
COL4A5-208ENST00000505728 TMEM223A0PJW6 202 aa5.63□□□□□ -1.51
COL4A5-208ENST00000505728 ZNF22P17026 224 aaPredicted RBP5.63□□□□□ -1.51
COL4A5-208ENST00000505728 TCTAP57738 103 aa5.63□□□□□ -1.51
COL4A5-208ENST00000505728 SEC11AP67812 179 aa5.63□□□□□ -1.51
COL4A5-208ENST00000505728 TMEM170BQ5T4T1 132 aa5.63□□□□□ -1.51
COL4A5-208ENST00000505728 AMMECR1LQ6DCA0 310 aa5.63□□□□□ -1.51
COL4A5-208ENST00000505728 Q6ZUT4 128 aa5.63□□□□□ -1.51
COL4A5-208ENST00000505728 FAM19A3Q7Z5A8 133 aa5.63□□□□□ -1.51
COL4A5-208ENST00000505728 OR5A1Q8NGJ0 315 aa5.63□□□□□ -1.51
COL4A5-208ENST00000505728 PLEKHB2Q96CS7 222 aa5.63□□□□□ -1.51
COL4A5-208ENST00000505728 VSIG2Q96IQ7 327 aa5.63□□□□□ -1.51
COL4A5-208ENST00000505728 CHAC1Q9BUX1 264 aa5.63□□□□□ -1.51
COL4A5-208ENST00000505728 CDC42SE2Q9NRR3 84 aa5.63□□□□□ -1.51
COL4A5-208ENST00000505728 TRAV8-6A0A0B4J262 113 aa5.62□□□□□ -1.51
COL4A5-208ENST00000505728 F5H768 121 aa5.62□□□□□ -1.51
COL4A5-208ENST00000505728 LEPROTO15243 131 aa5.62□□□□□ -1.51
COL4A5-208ENST00000505728 HINT1P49773 126 aaPredicted RBP5.62□□□□□ -1.51
COL4A5-208ENST00000505728 UBE2D1P51668 147 aa5.62□□□□□ -1.51
COL4A5-208ENST00000505728 HSD52Q0P140 79 aa5.62□□□□□ -1.51
COL4A5-208ENST00000505728 MRPL23Q16540 153 aaKnown RBP5.62□□□□□ -1.51
COL4A5-208ENST00000505728 C12orf74Q32Q52 190 aa5.62□□□□□ -1.51
COL4A5-208ENST00000505728 COL5A1-AS1Q5SY13 56 aa5.62□□□□□ -1.51
COL4A5-208ENST00000505728 MAPKAPK5-AS1Q8N8E1 139 aa5.62□□□□□ -1.51
COL4A5-208ENST00000505728 STAB2Q8WWQ8 2551 aa5.62□□□□□ -1.51
COL4A5-208ENST00000505728 K7EIL1 84 aa5.61□□□□□ -1.51
COL4A5-208ENST00000505728 BATFQ16520 125 aa5.61□□□□□ -1.51
COL4A5-208ENST00000505728 TAL2Q16559 108 aa5.61□□□□□ -1.51
COL4A5-208ENST00000505728 MPV17L2Q567V2 206 aa5.61□□□□□ -1.51
COL4A5-208ENST00000505728 BVES-AS1Q5T3Y7 98 aa5.61□□□□□ -1.51
COL4A5-208ENST00000505728 CHCHD5Q9BSY4 110 aa5.61□□□□□ -1.51
COL4A5-208ENST00000505728 GEMIN7Q9H840 131 aaKnown RBP5.61□□□□□ -1.51
COL4A5-208ENST00000505728 RETNQ9HD89 108 aa5.61□□□□□ -1.51
COL4A5-208ENST00000505728 TP73-AS1Q9UF72 201 aa5.61□□□□□ -1.51
COL4A5-208ENST00000505728 IGLV5-45A0A087WSX0 123 aa5.6□□□□□ -1.51
COL4A5-208ENST00000505728 A0A0J9YY99 117 aa5.6□□□□□ -1.51
COL4A5-208ENST00000505728 A0A1B0GUV1 79 aa5.6□□□□□ -1.51
COL4A5-208ENST00000505728 H3BNG1 76 aa5.6□□□□□ -1.51
COL4A5-208ENST00000505728 H3BRM9 83 aa5.6□□□□□ -1.51
COL4A5-208ENST00000505728 LGALS3P17931 250 aaKnown RBP5.6□□□□□ -1.51
COL4A5-208ENST00000505728 HERVK_113P63121 156 aa5.6□□□□□ -1.51
COL4A5-208ENST00000505728 GAGE6Q13070 117 aa5.6□□□□□ -1.51
COL4A5-208ENST00000505728 RNASE13Q5GAN3 156 aaKnown RBP5.6□□□□□ -1.51
COL4A5-208ENST00000505728 SPATA25Q9BR10 227 aa5.6□□□□□ -1.51
COL4A5-208ENST00000505728 TTTY13Q9BZ97 58 aa5.6□□□□□ -1.51
COL4A5-208ENST00000505728 ICOSQ9Y6W8 199 aa5.6□□□□□ -1.51
COL4A5-208ENST00000505728 DYNC2H1Q8NCM8 4307 aaKnown RBP5.6□□□□□ -1.51
COL4A5-208ENST00000505728 IGHV1-58A0A0C4DH39 117 aa5.59□□□□□ -1.51
COL4A5-208ENST00000505728 ZNF815PA8K554 130 aa5.59□□□□□ -1.51
COL4A5-208ENST00000505728 J3QQQ9 107 aa5.59□□□□□ -1.51
COL4A5-208ENST00000505728 LCE2BO14633 110 aa5.59□□□□□ -1.51
COL4A5-208ENST00000505728 LINC00242Q5T6M2 205 aa5.59□□□□□ -1.51
COL4A5-208ENST00000505728 LINC00469Q8N7U9 141 aa5.59□□□□□ -1.51
COL4A5-208ENST00000505728 ORAOV1Q8WV07 137 aa5.59□□□□□ -1.51
COL4A5-208ENST00000505728 HUWE1Q7Z6Z7 4374 aaKnown RBP5.59□□□□□ -1.52
COL4A5-208ENST00000505728 CCL25O15444 150 aa5.58□□□□□ -1.52
COL4A5-208ENST00000505728 HTN3P15516 51 aa5.58□□□□□ -1.52
COL4A5-208ENST00000505728 DEFB121Q5J5C9 76 aa5.58□□□□□ -1.52
COL4A5-208ENST00000505728 LELP1Q5T871 98 aa5.58□□□□□ -1.52
COL4A5-208ENST00000505728 TM2D3Q9BRN9 247 aa5.58□□□□□ -1.52
COL4A5-208ENST00000505728 DNAH7Q8WXX0 4024 aa5.58□□□□□ -1.52
COL4A5-208ENST00000505728 IGLV4-60A0A075B6I1 120 aa5.57□□□□□ -1.52
COL4A5-208ENST00000505728 A0A096LPF7 62 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms