RNA–Protein interactions for RNA: ENST00000504974.1

RFC1-209, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-209ENST00000504974 CMTM2Q8TAZ6 248 aa1.52□□□□□ -2.17
RFC1-209ENST00000504974 YPEL4Q96NS1 127 aa1.52□□□□□ -2.17
RFC1-209ENST00000504974 LINC01587Q99440 93 aa1.52□□□□□ -2.17
RFC1-209ENST00000504974 LINC00467Q9BRT7 94 aa1.52□□□□□ -2.17
RFC1-209ENST00000504974 OTORQ9NRC9 128 aa1.52□□□□□ -2.17
RFC1-209ENST00000504974 APLNQ9ULZ1 77 aa1.52□□□□□ -2.17
RFC1-209ENST00000504974 TNFSF18Q9UNG2 199 aa1.52□□□□□ -2.17
RFC1-209ENST00000504974 CHTOPQ9Y3Y2 248 aaKnown RBP1.52□□□□□ -2.17
RFC1-209ENST00000504974 TIMM8BQ9Y5J9 83 aaPredicted RBP1.52□□□□□ -2.17
RFC1-209ENST00000504974 LENEPQ9Y5L5 61 aa1.52□□□□□ -2.17
RFC1-209ENST00000504974 TRAPPC1Q9Y5R8 145 aa1.52□□□□□ -2.17
RFC1-209ENST00000504974 VPS13DQ5THJ4 4388 aa1.52□□□□□ -2.17
RFC1-209ENST00000504974 DNAH6Q9C0G6 4158 aa1.51□□□□□ -2.17
RFC1-209ENST00000504974 TRAV12-3A0A0B4J271 114 aa1.51□□□□□ -2.17
RFC1-209ENST00000504974 A0A0B4J2C4 111 aa1.51□□□□□ -2.17
RFC1-209ENST00000504974 CTXND1A0A1B0GTU2 59 aa1.51□□□□□ -2.17
RFC1-209ENST00000504974 PGPA6NDG6 321 aa1.51□□□□□ -2.17
RFC1-209ENST00000504974 RBFOX3A6NFN3 312 aa1.51□□□□□ -2.17
RFC1-209ENST00000504974 F5H768 121 aa1.51□□□□□ -2.17
RFC1-209ENST00000504974 G3V3Q6 166 aa1.51□□□□□ -2.17
RFC1-209ENST00000504974 H3BQ85 93 aa1.51□□□□□ -2.17
RFC1-209ENST00000504974 HMGB3O15347 200 aaKnown RBP1.51□□□□□ -2.17
RFC1-209ENST00000504974 ARPC5O15511 151 aa1.51□□□□□ -2.17
RFC1-209ENST00000504974 ATP5G1P05496 136 aa1.51□□□□□ -2.17
RFC1-209ENST00000504974 GPX1P07203 203 aa1.51□□□□□ -2.17
RFC1-209ENST00000504974 SCGB1C2P0DMR2 95 aa1.51□□□□□ -2.17
RFC1-209ENST00000504974 DEFB130BP0DP73 79 aa1.51□□□□□ -2.17
RFC1-209ENST00000504974 DEFB130AP0DP74 79 aa1.51□□□□□ -2.17
RFC1-209ENST00000504974 HTN3P15516 51 aa1.51□□□□□ -2.17
RFC1-209ENST00000504974 S100A2P29034 98 aa1.51□□□□□ -2.17
RFC1-209ENST00000504974 GCHFRP30047 84 aa1.51□□□□□ -2.17
RFC1-209ENST00000504974 ATP5G3P48201 142 aa1.51□□□□□ -2.17
RFC1-209ENST00000504974 TCL1AP56279 114 aa1.51□□□□□ -2.17
RFC1-209ENST00000504974 RANP62826 216 aaKnown RBP1.51□□□□□ -2.17
RFC1-209ENST00000504974 GNG5P63218 68 aa1.51□□□□□ -2.17
RFC1-209ENST00000504974 ZNF345Q14585 488 aa1.51□□□□□ -2.17
RFC1-209ENST00000504974 Q5BKY6 102 aa1.51□□□□□ -2.17
RFC1-209ENST00000504974 AKR1C8PQ5T2L2 129 aa1.51□□□□□ -2.17
RFC1-209ENST00000504974 IBA57Q5T440 356 aaKnown RBP1.51□□□□□ -2.17
RFC1-209ENST00000504974 Q6AWC8 147 aa1.51□□□□□ -2.17
RFC1-209ENST00000504974 RPL7L1Q6DKI1 246 aaKnown RBP1.51□□□□□ -2.17
RFC1-209ENST00000504974 GOLT1AQ6ZVE7 132 aa1.51□□□□□ -2.17
RFC1-209ENST00000504974 UBE2DNLQ8IWF7 75 aa1.51□□□□□ -2.17
RFC1-209ENST00000504974 AMN1Q8IY45 258 aa1.51□□□□□ -2.17
RFC1-209ENST00000504974 EIF4E3Q8N5X7 224 aaKnown RBP1.51□□□□□ -2.17
RFC1-209ENST00000504974 ZFAND2AQ8N6M9 145 aa1.51□□□□□ -2.17
RFC1-209ENST00000504974 TMEM75Q8N9X5 138 aa1.51□□□□□ -2.17
RFC1-209ENST00000504974 C5orf17Q8NAS9 161 aa1.51□□□□□ -2.17
RFC1-209ENST00000504974 Q8TAT8 98 aa1.51□□□□□ -2.17
RFC1-209ENST00000504974 SUN5Q8TC36 379 aa1.51□□□□□ -2.17
RFC1-209ENST00000504974 GNPNAT1Q96EK6 184 aaPredicted RBP1.51□□□□□ -2.17
RFC1-209ENST00000504974 HYLS1Q96M11 299 aa1.51□□□□□ -2.17
RFC1-209ENST00000504974 AGPAT4-IT1Q9H0P7 198 aa1.51□□□□□ -2.17
RFC1-209ENST00000504974 SH3BGRL3Q9H299 93 aa1.51□□□□□ -2.17
RFC1-209ENST00000504974 NOP10Q9NPE3 64 aaKnown RBP1.51□□□□□ -2.17
RFC1-209ENST00000504974 TMEM167BQ9NRX6 74 aa1.51□□□□□ -2.17
RFC1-209ENST00000504974 ARL2-SNX15V9GYD0 113 aa1.51□□□□□ -2.17
RFC1-209ENST00000504974 MUC19Q7Z5P9 8384 aa1.51□□□□□ -2.17
RFC1-209ENST00000504974 APOBP04114 4563 aaKnown RBP1.5□□□□□ -2.17
RFC1-209ENST00000504974 PKD1P98161 4303 aa1.5□□□□□ -2.17
RFC1-209ENST00000504974 TRGV2A0A075B6R0 118 aa1.5□□□□□ -2.17
RFC1-209ENST00000504974 TRGV1A0A0A0MS02 117 aa1.5□□□□□ -2.17
RFC1-209ENST00000504974 TRAV21A0A0B4J279 112 aa1.5□□□□□ -2.17
RFC1-209ENST00000504974 A0A0D9SG52 128 aa1.5□□□□□ -2.17
RFC1-209ENST00000504974 KANTRA0A1W2PQU2 76 aa1.5□□□□□ -2.17
RFC1-209ENST00000504974 A0A1W2PRE2 83 aa1.5□□□□□ -2.17
RFC1-209ENST00000504974 MAP1LC3B2A6NCE7 125 aa1.5□□□□□ -2.17
RFC1-209ENST00000504974 HMSDA8MTL9 139 aa1.5□□□□□ -2.17
RFC1-209ENST00000504974 GGTLC3B5MD39 225 aa1.5□□□□□ -2.17
RFC1-209ENST00000504974 F6UZH7 168 aa1.5□□□□□ -2.17
RFC1-209ENST00000504974 H3BNG1 76 aa1.5□□□□□ -2.17
RFC1-209ENST00000504974 SMLR1H3BR10 107 aa1.5□□□□□ -2.17
RFC1-209ENST00000504974 SPINK4O60575 86 aa1.5□□□□□ -2.17
RFC1-209ENST00000504974 IFNA7P01567 189 aa1.5□□□□□ -2.17
RFC1-209ENST00000504974 TCRAP04437 139 aa1.5□□□□□ -2.17
RFC1-209ENST00000504974 PRM2P04554 102 aa1.5□□□□□ -2.17
RFC1-209ENST00000504974 RNASE4P34096 147 aaKnown RBP1.5□□□□□ -2.17
RFC1-209ENST00000504974 EIF5AP63241 154 aaKnown RBP1.5□□□□□ -2.17
RFC1-209ENST00000504974 LGALS9BQ3B8N2 356 aa1.5□□□□□ -2.17
RFC1-209ENST00000504974 KRTAP25-1Q3LHN0 102 aa1.5□□□□□ -2.17
RFC1-209ENST00000504974 DPPA3Q6W0C5 159 aa1.5□□□□□ -2.17
RFC1-209ENST00000504974 SSX7Q7RTT5 188 aa1.5□□□□□ -2.17
RFC1-209ENST00000504974 Q86TA4 180 aa1.5□□□□□ -2.17
RFC1-209ENST00000504974 KRTAP13-1Q8IUC0 172 aa1.5□□□□□ -2.17
RFC1-209ENST00000504974 IQCF2Q8IXL9 164 aa1.5□□□□□ -2.17
RFC1-209ENST00000504974 KCNRGQ8N5I3 272 aa1.5□□□□□ -2.17
RFC1-209ENST00000504974 STOML3Q8TAV4 291 aa1.5□□□□□ -2.17
RFC1-209ENST00000504974 HIST1H2BAQ96A08 127 aa1.5□□□□□ -2.17
RFC1-209ENST00000504974 FMC1Q96HJ9 113 aa1.5□□□□□ -2.17
RFC1-209ENST00000504974 TCEAL7Q9BRU2 100 aa1.5□□□□□ -2.17
RFC1-209ENST00000504974 ZNF471Q9BX82 626 aaPredicted RBP1.5□□□□□ -2.17
RFC1-209ENST00000504974 NKX6-2Q9C056 277 aaPredicted RBP1.5□□□□□ -2.17
RFC1-209ENST00000504974 MAP1LC3BQ9GZQ8 125 aa1.5□□□□□ -2.17
RFC1-209ENST00000504974 TREM1Q9NP99 234 aa1.5□□□□□ -2.17
RFC1-209ENST00000504974 MRPL16Q9NX20 251 aaKnown RBP1.5□□□□□ -2.17
RFC1-209ENST00000504974 RBM12B-AS1Q9P1G2 102 aa1.5□□□□□ -2.17
RFC1-209ENST00000504974 NAGKQ9UJ70 344 aa1.5□□□□□ -2.17
RFC1-209ENST00000504974 EPDR1Q9UM22 224 aa1.5□□□□□ -2.17
RFC1-209ENST00000504974 MYCBP2O75592 4640 aa1.5□□□□□ -2.17
RFC1-209ENST00000504974 DNAH2Q9P225 4427 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms