RNA–Protein interactions for RNA: ENST00000504531.2

CASC9-201, Transcript of cancer susceptibility 9, humanhuman

TSL 1 (best) BASIC

Gene CASC9, Length 1,164 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC9-201ENST00000504531 PPDPFQ9H3Y8 114 aa6.38□□□□□ -1.39
CASC9-201ENST00000504531 C16orf95Q9H693 158 aa6.38□□□□□ -1.39
CASC9-201ENST00000504531 MAP6D1Q9H9H5 199 aa6.38□□□□□ -1.39
CASC9-201ENST00000504531 CSDC2Q9Y534 153 aaKnown RBP6.38□□□□□ -1.39
CASC9-201ENST00000504531 CR1P17927 2039 aa6.38□□□□□ -1.39
CASC9-201ENST00000504531 FN1P02751 2386 aaKnown RBP6.37□□□□□ -1.39
CASC9-201ENST00000504531 CSPG4Q6UVK1 2322 aa6.37□□□□□ -1.39
CASC9-201ENST00000504531 A0A0B4J2C4 111 aa6.37□□□□□ -1.39
CASC9-201ENST00000504531 A0A0J9YXY3 114 aa6.37□□□□□ -1.39
CASC9-201ENST00000504531 TMEM238C9JI98 176 aa6.37□□□□□ -1.39
CASC9-201ENST00000504531 TIMM17BO60830 172 aa6.37□□□□□ -1.39
CASC9-201ENST00000504531 SCGB1A1P11684 91 aa6.37□□□□□ -1.39
CASC9-201ENST00000504531 ZNF22P17026 224 aaPredicted RBP6.37□□□□□ -1.39
CASC9-201ENST00000504531 TIRAPP58753 221 aa6.37□□□□□ -1.39
CASC9-201ENST00000504531 RPL24P83731 157 aaKnown RBP6.37□□□□□ -1.39
CASC9-201ENST00000504531 TMEM170BQ5T4T1 132 aa6.37□□□□□ -1.39
CASC9-201ENST00000504531 CFAP126Q5VTH2 177 aa6.37□□□□□ -1.39
CASC9-201ENST00000504531 NDUFA11Q86Y39 141 aa6.37□□□□□ -1.39
CASC9-201ENST00000504531 TMEM61Q8N0U2 210 aa6.37□□□□□ -1.39
CASC9-201ENST00000504531 C10orf126Q8N4M7 172 aa6.37□□□□□ -1.39
CASC9-201ENST00000504531 DYNLRB2Q8TF09 96 aa6.37□□□□□ -1.39
CASC9-201ENST00000504531 DUX3Q96PT4 197 aa6.37□□□□□ -1.39
CASC9-201ENST00000504531 PRO0461Q9UI25 63 aa6.37□□□□□ -1.39
CASC9-201ENST00000504531 FLNAP21333 2647 aaKnown RBP6.37□□□□□ -1.39
CASC9-201ENST00000504531 AGRNO00468 2067 aa6.37□□□□□ -1.39
CASC9-201ENST00000504531 H3BMG7 143 aa6.36□□□□□ -1.39
CASC9-201ENST00000504531 K7ERJ3 54 aa6.36□□□□□ -1.39
CASC9-201ENST00000504531 RBMY1A1P0DJD3 496 aaKnown RBP6.36□□□□□ -1.39
CASC9-201ENST00000504531 RBMY1CP0DJD4 496 aa6.36□□□□□ -1.39
CASC9-201ENST00000504531 RBMY1FQ15415 496 aaKnown RBP6.36□□□□□ -1.39
CASC9-201ENST00000504531 SBSPONQ8IVN8 264 aa6.36□□□□□ -1.39
CASC9-201ENST00000504531 HIVEP2P31629 2446 aa6.36□□□□□ -1.39
CASC9-201ENST00000504531 IGLV5-45A0A087WSX0 123 aa6.35□□□□□ -1.39
CASC9-201ENST00000504531 IGHV1-58A0A0C4DH39 117 aa6.35□□□□□ -1.39
CASC9-201ENST00000504531 RBMY1BA6NDE4 496 aaKnown RBP6.35□□□□□ -1.39
CASC9-201ENST00000504531 RBMY1EA6NEQ0 496 aaKnown RBP6.35□□□□□ -1.39
CASC9-201ENST00000504531 KNCNA6PVL3 124 aa6.35□□□□□ -1.39
CASC9-201ENST00000504531 IGKV3-20P01619 116 aa6.35□□□□□ -1.39
CASC9-201ENST00000504531 RBMY1DP0C7P1 496 aaKnown RBP6.35□□□□□ -1.39
CASC9-201ENST00000504531 IFITM1P13164 125 aa6.35□□□□□ -1.39
CASC9-201ENST00000504531 COTL1Q14019 142 aa6.35□□□□□ -1.39
CASC9-201ENST00000504531 Q6ZSV7 163 aa6.35□□□□□ -1.39
CASC9-201ENST00000504531 KLHL30-AS1Q8NEE0 82 aa6.35□□□□□ -1.39
CASC9-201ENST00000504531 LINC01587Q99440 93 aa6.35□□□□□ -1.39
CASC9-201ENST00000504531 CHCHD7Q9BUK0 85 aa6.35□□□□□ -1.39
CASC9-201ENST00000504531 SPANXDQ9BXN6 97 aa6.35□□□□□ -1.39
CASC9-201ENST00000504531 MRPL16Q9NX20 251 aaKnown RBP6.35□□□□□ -1.39
CASC9-201ENST00000504531 SPANXCQ9NY87 97 aa6.35□□□□□ -1.39
CASC9-201ENST00000504531 PRO1854Q9UHT4 67 aa6.35□□□□□ -1.39
CASC9-201ENST00000504531 H7C423 109 aa6.34□□□□□ -1.39
CASC9-201ENST00000504531 CFC1BP0CG36 223 aa6.34□□□□□ -1.39
CASC9-201ENST00000504531 CFC1P0CG37 223 aa6.34□□□□□ -1.39
CASC9-201ENST00000504531 FAM104AQ969W3 186 aa6.34□□□□□ -1.39
CASC9-201ENST00000504531 NAA38Q9BRA0 125 aaKnown RBP6.34□□□□□ -1.39
CASC9-201ENST00000504531 UBE2D4Q9Y2X8 147 aa6.34□□□□□ -1.39
CASC9-201ENST00000504531 COL6A5A8TX70 2615 aa6.33□□□□□ -1.4
CASC9-201ENST00000504531 SAP30O75446 220 aa6.33□□□□□ -1.4
CASC9-201ENST00000504531 TSPAN13O95857 204 aa6.33□□□□□ -1.4
CASC9-201ENST00000504531 CD28P10747 220 aa6.33□□□□□ -1.4
CASC9-201ENST00000504531 TSPEAR-AS2P59090 65 aa6.33□□□□□ -1.4
CASC9-201ENST00000504531 DAZ2Q13117 558 aaKnown RBP6.33□□□□□ -1.4
CASC9-201ENST00000504531 DAZ4Q86SG3 579 aaKnown RBP6.33□□□□□ -1.4
CASC9-201ENST00000504531 COPS9Q8WXC6 57 aa6.33□□□□□ -1.4
CASC9-201ENST00000504531 GTSF1LQ9H1H1 148 aa6.33□□□□□ -1.4
CASC9-201ENST00000504531 DAZ3Q9NR90 486 aaKnown RBP6.33□□□□□ -1.4
CASC9-201ENST00000504531 TSSC4Q9Y5U2 329 aaPredicted RBP6.33□□□□□ -1.4
CASC9-201ENST00000504531 TRAV4A0A0B4J268 109 aa6.32□□□□□ -1.4
CASC9-201ENST00000504531 A0A0J9YXV3 536 aa6.32□□□□□ -1.4
CASC9-201ENST00000504531 TRBV30A0A0K0K1B3 111 aa6.32□□□□□ -1.4
CASC9-201ENST00000504531 TEX48A0A1B0GUV7 120 aa6.32□□□□□ -1.4
CASC9-201ENST00000504531 CCL24O00175 119 aa6.32□□□□□ -1.4
CASC9-201ENST00000504531 IGHV3-30-3P0DP02 117 aa6.32□□□□□ -1.4
CASC9-201ENST00000504531 WFDC2Q14508 124 aa6.32□□□□□ -1.4
CASC9-201ENST00000504531 ODF3L2Q3SX64 289 aa6.32□□□□□ -1.4
CASC9-201ENST00000504531 STHQ8IWL8 128 aa6.32□□□□□ -1.4
CASC9-201ENST00000504531 TMEM263Q8WUH6 116 aaKnown RBP6.32□□□□□ -1.4
CASC9-201ENST00000504531 VSIG2Q96IQ7 327 aa6.32□□□□□ -1.4
CASC9-201ENST00000504531 C1QTNF4Q9BXJ3 329 aa6.32□□□□□ -1.4
CASC9-201ENST00000504531 DNAJC9-AS1A6NH13 148 aa6.31□□□□□ -1.4
CASC9-201ENST00000504531 NDUFA7O95182 113 aa6.31□□□□□ -1.4
CASC9-201ENST00000504531 IGHV3-33P01772 117 aa6.31□□□□□ -1.4
CASC9-201ENST00000504531 HERVK_113P63121 156 aa6.31□□□□□ -1.4
CASC9-201ENST00000504531 KRTAP1-1Q07627 177 aa6.31□□□□□ -1.4
CASC9-201ENST00000504531 KRTAP24-1Q3LI83 254 aa6.31□□□□□ -1.4
CASC9-201ENST00000504531 ZFAND6Q6FIF0 208 aa6.31□□□□□ -1.4
CASC9-201ENST00000504531 OVOL2Q9BRP0 275 aa6.31□□□□□ -1.4
CASC9-201ENST00000504531 NBEAL1Q6ZS30 2694 aa6.31□□□□□ -1.4
CASC9-201ENST00000504531 NSD1Q96L73 2696 aaPredicted RBP6.3□□□□□ -1.4
CASC9-201ENST00000504531 IGLV5-39A0A0G2JS06 123 aa6.3□□□□□ -1.4
CASC9-201ENST00000504531 RPL36AP83881 106 aaKnown RBP6.3□□□□□ -1.4
CASC9-201ENST00000504531 DEFB136Q30KP8 78 aa6.3□□□□□ -1.4
CASC9-201ENST00000504531 C18orf65Q6ZTR6 163 aa6.3□□□□□ -1.4
CASC9-201ENST00000504531 C1orf158Q8N1D5 194 aa6.3□□□□□ -1.4
CASC9-201ENST00000504531 RPL36ALQ969Q0 106 aaKnown RBP6.3□□□□□ -1.4
CASC9-201ENST00000504531 LITAFQ99732 161 aa6.3□□□□□ -1.4
CASC9-201ENST00000504531 OPRPNQ99935 248 aaPredicted RBP6.3□□□□□ -1.4
CASC9-201ENST00000504531 ERG28Q9UKR5 140 aa6.3□□□□□ -1.4
CASC9-201ENST00000504531 A4D1N5 150 aa6.29□□□□□ -1.4
CASC9-201ENST00000504531 NDUFA1O15239 70 aa6.29□□□□□ -1.4
CASC9-201ENST00000504531 IGLV1-51P01701 117 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms