RNA–Protein interactions for RNA: ENST00000503942.1

UBE3D-205, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 3

Gene UBE3D, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-205ENST00000503942 MUC4Q99102 2169 aa2.2□□□□□ -2.06
UBE3D-205ENST00000503942 DNAH6Q9C0G6 4158 aa2.2□□□□□ -2.06
UBE3D-205ENST00000503942 TRBV20OR9-2A0A075B6H5 130 aa2.19□□□□□ -2.06
UBE3D-205ENST00000503942 TMSB15BA0A087X1C1 80 aa2.19□□□□□ -2.06
UBE3D-205ENST00000503942 GRIFINA4D1Z8 144 aa2.19□□□□□ -2.06
UBE3D-205ENST00000503942 RBFOX3A6NFN3 312 aa2.19□□□□□ -2.06
UBE3D-205ENST00000503942 H7BYZ3 331 aa2.19□□□□□ -2.06
UBE3D-205ENST00000503942 M0R036 132 aa2.19□□□□□ -2.06
UBE3D-205ENST00000503942 SH2D1AO60880 128 aa2.19□□□□□ -2.06
UBE3D-205ENST00000503942 IGHV3-53P01767 116 aa2.19□□□□□ -2.06
UBE3D-205ENST00000503942 TYMSP04818 313 aa2.19□□□□□ -2.06
UBE3D-205ENST00000503942 SRP19P09132 144 aaKnown RBP2.19□□□□□ -2.06
UBE3D-205ENST00000503942 DEFB130BP0DP73 79 aa2.19□□□□□ -2.06
UBE3D-205ENST00000503942 DEFB130AP0DP74 79 aa2.19□□□□□ -2.06
UBE3D-205ENST00000503942 BCL2P10415 239 aa2.19□□□□□ -2.06
UBE3D-205ENST00000503942 MIFP14174 115 aa2.19□□□□□ -2.06
UBE3D-205ENST00000503942 HTN3P15516 51 aa2.19□□□□□ -2.06
UBE3D-205ENST00000503942 RPL35P42766 123 aaKnown RBP2.19□□□□□ -2.06
UBE3D-205ENST00000503942 TAS2R60P59551 318 aa2.19□□□□□ -2.06
UBE3D-205ENST00000503942 RPL19P84098 196 aaKnown RBP2.19□□□□□ -2.06
UBE3D-205ENST00000503942 MEF2BQ02080 365 aaPredicted RBP2.19□□□□□ -2.06
UBE3D-205ENST00000503942 Q6AWC8 147 aa2.19□□□□□ -2.06
UBE3D-205ENST00000503942 TMEM136Q6ZRR5 245 aa2.19□□□□□ -2.06
UBE3D-205ENST00000503942 Q6ZTI0 123 aa2.19□□□□□ -2.06
UBE3D-205ENST00000503942 BAGE2Q86Y30 109 aa2.19□□□□□ -2.06
UBE3D-205ENST00000503942 EIF4E3Q8N5X7 224 aaKnown RBP2.19□□□□□ -2.06
UBE3D-205ENST00000503942 LINC00469Q8N7U9 141 aa2.19□□□□□ -2.06
UBE3D-205ENST00000503942 HIST1H2BAQ96A08 127 aa2.19□□□□□ -2.06
UBE3D-205ENST00000503942 MANBALQ9NQG1 85 aa2.19□□□□□ -2.06
UBE3D-205ENST00000503942 MED9Q9NWA0 146 aa2.19□□□□□ -2.06
UBE3D-205ENST00000503942 MRPL16Q9NX20 251 aaKnown RBP2.19□□□□□ -2.06
UBE3D-205ENST00000503942 LENEPQ9Y5L5 61 aa2.19□□□□□ -2.06
UBE3D-205ENST00000503942 DNAH10Q8IVF4 4471 aa2.19□□□□□ -2.06
UBE3D-205ENST00000503942 HYDINQ4G0P3 5121 aa2.18□□□□□ -2.06
UBE3D-205ENST00000503942 RYR3Q15413 4870 aa2.18□□□□□ -2.06
UBE3D-205ENST00000503942 HMCN1Q96RW7 5635 aa2.18□□□□□ -2.06
UBE3D-205ENST00000503942 RYR2Q92736 4967 aa2.18□□□□□ -2.06
UBE3D-205ENST00000503942 TRGV1A0A0A0MS02 117 aa2.18□□□□□ -2.06
UBE3D-205ENST00000503942 TRAV21A0A0B4J279 112 aa2.18□□□□□ -2.06
UBE3D-205ENST00000503942 MUC21A0A0G2JKD1 596 aa2.18□□□□□ -2.06
UBE3D-205ENST00000503942 TRBV6-1A0A0K0K1D8 114 aa2.18□□□□□ -2.06
UBE3D-205ENST00000503942 MUC21A0A140T8X8 626 aa2.18□□□□□ -2.06
UBE3D-205ENST00000503942 SMIM9A6NGZ8 99 aa2.18□□□□□ -2.06
UBE3D-205ENST00000503942 K7EN84 100 aa2.18□□□□□ -2.06
UBE3D-205ENST00000503942 NDUFS5O43920 106 aa2.18□□□□□ -2.06
UBE3D-205ENST00000503942 SPINK4O60575 86 aa2.18□□□□□ -2.06
UBE3D-205ENST00000503942 LTAP01374 205 aa2.18□□□□□ -2.06
UBE3D-205ENST00000503942 OR5AL1P0C617 328 aa2.18□□□□□ -2.06
UBE3D-205ENST00000503942 SFTA3P0C7M3 94 aa2.18□□□□□ -2.06
UBE3D-205ENST00000503942 SPART-AS1P0CW21 52 aa2.18□□□□□ -2.06
UBE3D-205ENST00000503942 GZMBP10144 247 aa2.18□□□□□ -2.06
UBE3D-205ENST00000503942 RNASE3P12724 160 aaKnown RBP2.18□□□□□ -2.06
UBE3D-205ENST00000503942 CEBPGP53567 150 aa2.18□□□□□ -2.06
UBE3D-205ENST00000503942 TCL1AP56279 114 aa2.18□□□□□ -2.06
UBE3D-205ENST00000503942 DAD1P61803 113 aa2.18□□□□□ -2.06
UBE3D-205ENST00000503942 UBE2G1P62253 170 aa2.18□□□□□ -2.06
UBE3D-205ENST00000503942 CENPWQ5EE01 88 aa2.18□□□□□ -2.06
UBE3D-205ENST00000503942 TTC32Q5I0X7 151 aa2.18□□□□□ -2.06
UBE3D-205ENST00000503942 LINC00337Q8N6G1 96 aa2.18□□□□□ -2.06
UBE3D-205ENST00000503942 LINC00304Q8N9R0 145 aa2.18□□□□□ -2.06
UBE3D-205ENST00000503942 TMEM263Q8WUH6 116 aaKnown RBP2.18□□□□□ -2.06
UBE3D-205ENST00000503942 FMC1Q96HJ9 113 aa2.18□□□□□ -2.06
UBE3D-205ENST00000503942 FAM210AQ96ND0 272 aa2.18□□□□□ -2.06
UBE3D-205ENST00000503942 MAP1LC3CQ9BXW4 147 aa2.18□□□□□ -2.06
UBE3D-205ENST00000503942 NKX6-2Q9C056 277 aaPredicted RBP2.18□□□□□ -2.06
UBE3D-205ENST00000503942 TIMM8BQ9Y5J9 83 aaPredicted RBP2.18□□□□□ -2.06
UBE3D-205ENST00000503942 DNAH2Q9P225 4427 aa2.18□□□□□ -2.06
UBE3D-205ENST00000503942 DEFB131BA0A096LNP1 70 aa2.17□□□□□ -2.06
UBE3D-205ENST00000503942 IGHV3-73A0A0B4J1V6 119 aa2.17□□□□□ -2.06
UBE3D-205ENST00000503942 FAM240AA0A1B0GVK7 77 aa2.17□□□□□ -2.06
UBE3D-205ENST00000503942 FABP5P3A8MUU1 101 aa2.17□□□□□ -2.06
UBE3D-205ENST00000503942 B4DEV8 164 aa2.17□□□□□ -2.06
UBE3D-205ENST00000503942 IGLL5B9A064 214 aa2.17□□□□□ -2.06
UBE3D-205ENST00000503942 C9JCJ5 164 aa2.17□□□□□ -2.06
UBE3D-205ENST00000503942 F5H768 121 aa2.17□□□□□ -2.06
UBE3D-205ENST00000503942 C3orf84H3BNL1 204 aa2.17□□□□□ -2.06
UBE3D-205ENST00000503942 H3BVH4 76 aa2.17□□□□□ -2.06
UBE3D-205ENST00000503942 PDE6DO43924 150 aa2.17□□□□□ -2.06
UBE3D-205ENST00000503942 IFNA1P01562 189 aa2.17□□□□□ -2.06
UBE3D-205ENST00000503942 ORM1P02763 201 aa2.17□□□□□ -2.06
UBE3D-205ENST00000503942 PFN1P07737 140 aaKnown RBP2.17□□□□□ -2.06
UBE3D-205ENST00000503942 ARMS2P0C7Q2 107 aa2.17□□□□□ -2.06
UBE3D-205ENST00000503942 MGST1P10620 155 aaKnown RBP2.17□□□□□ -2.06
UBE3D-205ENST00000503942 TDRG1Q3Y452 100 aa2.17□□□□□ -2.06
UBE3D-205ENST00000503942 SAPCD1Q5SSQ6 148 aa2.17□□□□□ -2.06
UBE3D-205ENST00000503942 FAM162BQ5T6X4 162 aa2.17□□□□□ -2.06
UBE3D-205ENST00000503942 FAM104BQ5XKR9 115 aa2.17□□□□□ -2.06
UBE3D-205ENST00000503942 DAZ4Q86SG3 579 aaKnown RBP2.17□□□□□ -2.06
UBE3D-205ENST00000503942 C1orf64Q8NEQ6 169 aa2.17□□□□□ -2.06
UBE3D-205ENST00000503942 LINC00467Q9BRT7 94 aa2.17□□□□□ -2.06
UBE3D-205ENST00000503942 EIF5A2Q9GZV4 153 aaKnown RBP2.17□□□□□ -2.06
UBE3D-205ENST00000503942 RNASE7Q9H1E1 156 aaKnown RBP2.17□□□□□ -2.06
UBE3D-205ENST00000503942 APLNQ9ULZ1 77 aa2.17□□□□□ -2.06
UBE3D-205ENST00000503942 ZFP30Q9Y2G7 519 aa2.17□□□□□ -2.06
UBE3D-205ENST00000503942 DNAH17Q9UFH2 4485 aa2.17□□□□□ -2.06
UBE3D-205ENST00000503942 FRAS1Q86XX4 4008 aa2.16□□□□□ -2.06
UBE3D-205ENST00000503942 TRGV2A0A075B6R0 118 aa2.16□□□□□ -2.06
UBE3D-205ENST00000503942 A0A096LPF7 62 aa2.16□□□□□ -2.06
UBE3D-205ENST00000503942 TRAV10A0A0B4J240 114 aa2.16□□□□□ -2.06
UBE3D-205ENST00000503942 A0A0J9YY99 117 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms