RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 PRSS47A8MTI9 375 aa11.97□□□□□ -0.49
PDLIM7-209ENST00000503346 GCSHP23434 173 aa11.97□□□□□ -0.49
PDLIM7-209ENST00000503346 C14orf177Q52M58 125 aa11.97□□□□□ -0.49
PDLIM7-209ENST00000503346 HSPG2P98160 4391 aa11.97□□□□□ -0.49
PDLIM7-209ENST00000503346 APOC3P02656 99 aa11.96□□□□□ -0.49
PDLIM7-209ENST00000503346 KRTAP10-1P60331 282 aa11.96□□□□□ -0.49
PDLIM7-209ENST00000503346 SMAGPQ0VAQ4 97 aa11.96□□□□□ -0.49
PDLIM7-209ENST00000503346 NDUFA5Q16718 116 aa11.96□□□□□ -0.49
PDLIM7-209ENST00000503346 CDC42SE2Q9NRR3 84 aa11.96□□□□□ -0.49
PDLIM7-209ENST00000503346 CSDC2Q9Y534 153 aaKnown RBP11.96□□□□□ -0.49
PDLIM7-209ENST00000503346 USP17L23D6RBM5 183 aa11.95□□□□□ -0.5
PDLIM7-209ENST00000503346 SVBPQ8N300 66 aa11.95□□□□□ -0.5
PDLIM7-209ENST00000503346 TMEM18Q96B42 140 aa11.95□□□□□ -0.5
PDLIM7-209ENST00000503346 UBE2D4Q9Y2X8 147 aa11.95□□□□□ -0.5
PDLIM7-209ENST00000503346 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.94□□□□□ -0.5
PDLIM7-209ENST00000503346 IGKV3OR2-268A0A0C4DH90 116 aa11.94□□□□□ -0.5
PDLIM7-209ENST00000503346 ZNF664Q8N3J9 261 aa11.94□□□□□ -0.5
PDLIM7-209ENST00000503346 TIMM21Q9BVV7 248 aa11.94□□□□□ -0.5
PDLIM7-209ENST00000503346 MAP1LC3AQ9H492 121 aa11.94□□□□□ -0.5
PDLIM7-209ENST00000503346 DNAH8Q96JB1 4490 aa11.94□□□□□ -0.5
PDLIM7-209ENST00000503346 SNAPINO95295 136 aa11.93□□□□□ -0.5
PDLIM7-209ENST00000503346 DGAT2L7PQ6IED9 249 aa11.93□□□□□ -0.5
PDLIM7-209ENST00000503346 GNB1LQ9BYB4 327 aa11.93□□□□□ -0.5
PDLIM7-209ENST00000503346 COX19Q49B96 90 aa11.92□□□□□ -0.5
PDLIM7-209ENST00000503346 CHCHD10Q8WYQ3 142 aaPredicted RBP11.92□□□□□ -0.5
PDLIM7-209ENST00000503346 LOC389332A0A1B0GUA5 103 aa11.91□□□□□ -0.5
PDLIM7-209ENST00000503346 LINC00959A0A1B0GUT2 108 aa11.91□□□□□ -0.5
PDLIM7-209ENST00000503346 GAGE12HA6NDE8 117 aa11.91□□□□□ -0.5
PDLIM7-209ENST00000503346 RAB5AP20339 215 aa11.91□□□□□ -0.5
PDLIM7-209ENST00000503346 Q8N8P6 123 aa11.91□□□□□ -0.5
PDLIM7-209ENST00000503346 RPL39P62891 51 aaKnown RBP11.9□□□□□ -0.5
PDLIM7-209ENST00000503346 PRSS1P07477 247 aa11.89□□□□□ -0.51
PDLIM7-209ENST00000503346 KIAA1644Q3SXP7 199 aa11.89□□□□□ -0.51
PDLIM7-209ENST00000503346 SPANXA1Q9NS26 97 aa11.89□□□□□ -0.51
PDLIM7-209ENST00000503346 MT-ND6P03923 174 aa11.88□□□□□ -0.51
PDLIM7-209ENST00000503346 FOXI1Q12951 378 aa11.88□□□□□ -0.51
PDLIM7-209ENST00000503346 Q6ZUT4 128 aa11.88□□□□□ -0.51
PDLIM7-209ENST00000503346 K7EMI3 77 aa11.87□□□□□ -0.51
PDLIM7-209ENST00000503346 CCL25O15444 150 aa11.87□□□□□ -0.51
PDLIM7-209ENST00000503346 XGP55808 180 aa11.87□□□□□ -0.51
PDLIM7-209ENST00000503346 SS18Q15532 418 aa11.87□□□□□ -0.51
PDLIM7-209ENST00000503346 FAM104AQ969W3 186 aa11.87□□□□□ -0.51
PDLIM7-209ENST00000503346 NXT2Q9NPJ8 142 aaKnown RBP11.87□□□□□ -0.51
PDLIM7-209ENST00000503346 XCL1P47992 114 aa11.86□□□□□ -0.51
PDLIM7-209ENST00000503346 MRPS36P82909 103 aaKnown RBP11.86□□□□□ -0.51
PDLIM7-209ENST00000503346 CFAP161Q6P656 301 aa11.86□□□□□ -0.51
PDLIM7-209ENST00000503346 TGIF2-C20orf24A0A0A6YYL0 155 aa11.85□□□□□ -0.51
PDLIM7-209ENST00000503346 IFI27P40305 119 aaPredicted RBP11.85□□□□□ -0.51
PDLIM7-209ENST00000503346 ORMDL2Q53FV1 153 aa11.85□□□□□ -0.51
PDLIM7-209ENST00000503346 RNASE13Q5GAN3 156 aaKnown RBP11.85□□□□□ -0.51
PDLIM7-209ENST00000503346 CD164L2Q6UWJ8 174 aa11.85□□□□□ -0.51
PDLIM7-209ENST00000503346 C15orf56Q8N910 161 aa11.85□□□□□ -0.51
PDLIM7-209ENST00000503346 ALKBH7Q9BT30 221 aaPredicted RBP11.85□□□□□ -0.51
PDLIM7-209ENST00000503346 MRPL18Q9H0U6 180 aaKnown RBP11.85□□□□□ -0.51
PDLIM7-209ENST00000503346 PYGO1Q9Y3Y4 419 aa11.85□□□□□ -0.51
PDLIM7-209ENST00000503346 hDV102S1A0JD36 115 aa11.84□□□□□ -0.51
PDLIM7-209ENST00000503346 C1orf196B1AJZ1 125 aa11.84□□□□□ -0.51
PDLIM7-209ENST00000503346 Q6ZSA8 131 aa11.84□□□□□ -0.51
PDLIM7-209ENST00000503346 CNBPP62633 177 aaKnown RBP11.83□□□□□ -0.52
PDLIM7-209ENST00000503346 FABP9Q0Z7S8 132 aa11.83□□□□□ -0.52
PDLIM7-209ENST00000503346 LINC01620Q4KN68 170 aa11.83□□□□□ -0.52
PDLIM7-209ENST00000503346 SLC7A5P1Q8MH63 180 aa11.83□□□□□ -0.52
PDLIM7-209ENST00000503346 FAM30AQ9NZY2 134 aa11.83□□□□□ -0.52
PDLIM7-209ENST00000503346 TRAV13-1A0A0B4J241 112 aa11.82□□□□□ -0.52
PDLIM7-209ENST00000503346 C2orf66Q6UXQ4 117 aa11.82□□□□□ -0.52
PDLIM7-209ENST00000503346 OPRPNQ99935 248 aaPredicted RBP11.82□□□□□ -0.52
PDLIM7-209ENST00000503346 CYSLTR1Q9Y271 337 aa11.82□□□□□ -0.52
PDLIM7-209ENST00000503346 GVQW2A0A096LPI5 108 aaPredicted RBP11.81□□□□□ -0.52
PDLIM7-209ENST00000503346 C9orf163Q8N9P6 203 aa11.81□□□□□ -0.52
PDLIM7-209ENST00000503346 YPEL4Q96NS1 127 aa11.81□□□□□ -0.52
PDLIM7-209ENST00000503346 KRTAP17-1Q9BYP8 105 aa11.81□□□□□ -0.52
PDLIM7-209ENST00000503346 AP5S1Q9NUS5 200 aa11.81□□□□□ -0.52
PDLIM7-209ENST00000503346 IGLV4-3A0A075B6K6 122 aa11.8□□□□□ -0.52
PDLIM7-209ENST00000503346 SLPIP03973 132 aa11.8□□□□□ -0.52
PDLIM7-209ENST00000503346 PRSS3P2Q8NHM4 247 aa11.8□□□□□ -0.52
PDLIM7-209ENST00000503346 TRAPPC1Q9Y5R8 145 aa11.8□□□□□ -0.52
PDLIM7-209ENST00000503346 IGHV1-58A0A0C4DH39 117 aa11.79□□□□□ -0.52
PDLIM7-209ENST00000503346 LINC01546A6NGU7 62 aa11.79□□□□□ -0.52
PDLIM7-209ENST00000503346 G0S2P27469 103 aa11.79□□□□□ -0.52
PDLIM7-209ENST00000503346 Q8N1X5 172 aa11.79□□□□□ -0.52
PDLIM7-209ENST00000503346 FAT1Q14517 4588 aa11.78□□□□□ -0.52
PDLIM7-209ENST00000503346 IFITM10A6NMD0 228 aa11.78□□□□□ -0.52
PDLIM7-209ENST00000503346 NPSP0C0P6 89 aa11.78□□□□□ -0.52
PDLIM7-209ENST00000503346 HIGD2BQ4VC39 106 aa11.78□□□□□ -0.52
PDLIM7-209ENST00000503346 TMEM141Q96I45 108 aa11.78□□□□□ -0.52
PDLIM7-209ENST00000503346 IGIPA6NJ69 53 aa11.77□□□□□ -0.53
PDLIM7-209ENST00000503346 COX7A2LO14548 114 aa11.77□□□□□ -0.53
PDLIM7-209ENST00000503346 ABCA13Q86UQ4 5058 aa11.76□□□□□ -0.53
PDLIM7-209ENST00000503346 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.76□□□□□ -0.53
PDLIM7-209ENST00000503346 HAMPP81172 84 aa11.76□□□□□ -0.53
PDLIM7-209ENST00000503346 TOMM6Q96B49 74 aa11.76□□□□□ -0.53
PDLIM7-209ENST00000503346 SMCO4Q9NRQ5 59 aa11.76□□□□□ -0.53
PDLIM7-209ENST00000503346 TEX43Q6ZNM6 134 aa11.75□□□□□ -0.53
PDLIM7-209ENST00000503346 IGHV3OR16-9A0A0B4J2B5 98 aa11.74□□□□□ -0.53
PDLIM7-209ENST00000503346 MALP21145 153 aa11.74□□□□□ -0.53
PDLIM7-209ENST00000503346 Q6ZN92 141 aa11.74□□□□□ -0.53
PDLIM7-209ENST00000503346 SDIM1Q6ZPB5 146 aa11.74□□□□□ -0.53
PDLIM7-209ENST00000503346 FA2HQ7L5A8 372 aa11.74□□□□□ -0.53
PDLIM7-209ENST00000503346 CBLN2Q8IUK8 224 aa11.74□□□□□ -0.53
PDLIM7-209ENST00000503346 AMELXQ99217 191 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms