RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 HHLA3Q9XRX5 114 aa8.42□□□□□ -1.06
USP46-204ENST00000503060 GCN1Q92616 2671 aaKnown RBP8.42□□□□□ -1.06
USP46-204ENST00000503060 TRAV12-1A0A0B4J245 112 aa8.42□□□□□ -1.06
USP46-204ENST00000503060 TMEM262E9PQX1 116 aa8.42□□□□□ -1.06
USP46-204ENST00000503060 MPV17L2Q567V2 206 aa8.42□□□□□ -1.06
USP46-204ENST00000503060 ZFP2Q6ZN57 461 aa8.41□□□□□ -1.06
USP46-204ENST00000503060 SPANXDQ9BXN6 97 aa8.41□□□□□ -1.06
USP46-204ENST00000503060 TRBV27A0A0K0K1C4 114 aa8.41□□□□□ -1.06
USP46-204ENST00000503060 M0R2P5 195 aa8.41□□□□□ -1.06
USP46-204ENST00000503060 NSUN5P1Q3KNT7 163 aa8.41□□□□□ -1.06
USP46-204ENST00000503060 C10orf126Q8N4M7 172 aa8.41□□□□□ -1.06
USP46-204ENST00000503060 NF1P21359 2839 aa8.4□□□□□ -1.06
USP46-204ENST00000503060 A0A0U1RQV1 116 aa8.4□□□□□ -1.06
USP46-204ENST00000503060 H7C1H1 209 aa8.4□□□□□ -1.06
USP46-204ENST00000503060 C9orf153Q5TBE3 101 aa8.4□□□□□ -1.06
USP46-204ENST00000503060 NEXN-AS1Q8NBZ9 246 aa8.4□□□□□ -1.06
USP46-204ENST00000503060 SPATA3Q8NHX4 192 aa8.4□□□□□ -1.06
USP46-204ENST00000503060 DPH3Q96FX2 82 aa8.4□□□□□ -1.06
USP46-204ENST00000503060 HIVEP2P31629 2446 aa8.4□□□□□ -1.07
USP46-204ENST00000503060 WNK1Q9H4A3 2382 aa8.4□□□□□ -1.07
USP46-204ENST00000503060 HECTD1Q9ULT8 2610 aa8.4□□□□□ -1.07
USP46-204ENST00000503060 PIK3CD-AS1Q5SR53 167 aa8.4□□□□□ -1.07
USP46-204ENST00000503060 ZC2HC1BQ5TFG8 222 aa8.4□□□□□ -1.07
USP46-204ENST00000503060 SAMD5Q5TGI4 173 aa8.4□□□□□ -1.07
USP46-204ENST00000503060 PCP2Q8IVA1 136 aa8.4□□□□□ -1.07
USP46-204ENST00000503060 C11orf72Q8NBR9 251 aa8.4□□□□□ -1.07
USP46-204ENST00000503060 XCL2Q9UBD3 114 aa8.4□□□□□ -1.07
USP46-204ENST00000503060 LINC01549A6NIU2 74 aa8.39□□□□□ -1.07
USP46-204ENST00000503060 A8MWV9 139 aa8.39□□□□□ -1.07
USP46-204ENST00000503060 F8VRH5 84 aa8.39□□□□□ -1.07
USP46-204ENST00000503060 PLNP26678 52 aa8.39□□□□□ -1.07
USP46-204ENST00000503060 CMC4P56277 68 aaPredicted RBP8.39□□□□□ -1.07
USP46-204ENST00000503060 C12orf74Q32Q52 190 aa8.39□□□□□ -1.07
USP46-204ENST00000503060 DEFB104AQ8WTQ1 72 aa8.39□□□□□ -1.07
USP46-204ENST00000503060 IGKV2D-26A0A0A0MRZ7 120 aa8.39□□□□□ -1.07
USP46-204ENST00000503060 IGLV1-51P01701 117 aa8.39□□□□□ -1.07
USP46-204ENST00000503060 GTSCR1Q86UQ5 136 aa8.39□□□□□ -1.07
USP46-204ENST00000503060 CUBNO60494 3623 aa8.38□□□□□ -1.07
USP46-204ENST00000503060 A0A1W2PPM0 123 aa8.38□□□□□ -1.07
USP46-204ENST00000503060 FABP2P12104 132 aa8.38□□□□□ -1.07
USP46-204ENST00000503060 KRTAP10-3P60369 221 aa8.38□□□□□ -1.07
USP46-204ENST00000503060 IGHV3-73A0A0B4J1V6 119 aa8.38□□□□□ -1.07
USP46-204ENST00000503060 A0A1B0GWB2 263 aa8.38□□□□□ -1.07
USP46-204ENST00000503060 TMEM258P61165 79 aa8.38□□□□□ -1.07
USP46-204ENST00000503060 IGIPA6NJ69 53 aa8.37□□□□□ -1.07
USP46-204ENST00000503060 RPL39P62891 51 aaKnown RBP8.37□□□□□ -1.07
USP46-204ENST00000503060 RHOHQ15669 191 aa8.37□□□□□ -1.07
USP46-204ENST00000503060 TSHBP01222 138 aa8.37□□□□□ -1.07
USP46-204ENST00000503060 BEAN1Q3B7T3 259 aa8.37□□□□□ -1.07
USP46-204ENST00000503060 NDUFA11Q86Y39 141 aa8.37□□□□□ -1.07
USP46-204ENST00000503060 C3orf22Q8N5N4 141 aa8.37□□□□□ -1.07
USP46-204ENST00000503060 SETD2Q9BYW2 2564 aaPredicted RBP8.36□□□□□ -1.07
USP46-204ENST00000503060 INAFM1C9JVW0 142 aa8.36□□□□□ -1.07
USP46-204ENST00000503060 I3L3M4 83 aa8.36□□□□□ -1.07
USP46-204ENST00000503060 UQCRQO14949 82 aa8.36□□□□□ -1.07
USP46-204ENST00000503060 ATP5G1P05496 136 aa8.36□□□□□ -1.07
USP46-204ENST00000503060 CFAP126Q5VTH2 177 aa8.36□□□□□ -1.07
USP46-204ENST00000503060 LINC00526Q96FQ7 95 aa8.36□□□□□ -1.07
USP46-204ENST00000503060 TMEM141Q96I45 108 aa8.36□□□□□ -1.07
USP46-204ENST00000503060 TIMM17AQ99595 171 aa8.36□□□□□ -1.07
USP46-204ENST00000503060 IGHV3OR16-12A0A075B7B8 117 aa8.35□□□□□ -1.07
USP46-204ENST00000503060 P0DMU3 169 aa8.35□□□□□ -1.07
USP46-204ENST00000503060 FAM231AP0DMU4 169 aa8.35□□□□□ -1.07
USP46-204ENST00000503060 FAM231CP0DMU5 169 aa8.35□□□□□ -1.07
USP46-204ENST00000503060 ANKRD29Q8N6D5 301 aa8.35□□□□□ -1.07
USP46-204ENST00000503060 TTTY13Q9BZ97 58 aa8.35□□□□□ -1.07
USP46-204ENST00000503060 C19orf73Q9NVV2 129 aa8.35□□□□□ -1.07
USP46-204ENST00000503060 SNCGO76070 127 aa8.34□□□□□ -1.07
USP46-204ENST00000503060 DAZ2Q13117 558 aaKnown RBP8.34□□□□□ -1.07
USP46-204ENST00000503060 Q6ZRU5 148 aa8.34□□□□□ -1.07
USP46-204ENST00000503060 Q6ZSN1 163 aa8.34□□□□□ -1.07
USP46-204ENST00000503060 DAZ4Q86SG3 579 aaKnown RBP8.34□□□□□ -1.07
USP46-204ENST00000503060 DAZ3Q9NR90 486 aaKnown RBP8.34□□□□□ -1.07
USP46-204ENST00000503060 LYRM9A8MSI8 78 aa8.34□□□□□ -1.07
USP46-204ENST00000503060 H3BUT2 72 aa8.34□□□□□ -1.07
USP46-204ENST00000503060 WFDC10AQ9H1F0 79 aa8.34□□□□□ -1.07
USP46-204ENST00000503060 GYPEP15421 78 aa8.33□□□□□ -1.08
USP46-204ENST00000503060 C20orf203Q8NBC4 194 aa8.33□□□□□ -1.08
USP46-204ENST00000503060 NACAE9PAV3 2078 aa8.33□□□□□ -1.08
USP46-204ENST00000503060 GIG44P09565 113 aaPredicted RBP8.33□□□□□ -1.08
USP46-204ENST00000503060 HIGD1BQ9P298 99 aa8.33□□□□□ -1.08
USP46-204ENST00000503060 NOTCH2Q04721 2471 aa8.32□□□□□ -1.08
USP46-204ENST00000503060 IGHV3-53P01767 116 aa8.32□□□□□ -1.08
USP46-204ENST00000503060 GAGE2AQ6NT46 116 aa8.32□□□□□ -1.08
USP46-204ENST00000503060 IGLV4-69A0A075B6H9 119 aa8.32□□□□□ -1.08
USP46-204ENST00000503060 RRN3P1Q2M238 152 aa8.32□□□□□ -1.08
USP46-204ENST00000503060 C3orf56Q8N813 242 aa8.32□□□□□ -1.08
USP46-204ENST00000503060 MAPKAPK5-AS1Q8N8E1 139 aa8.32□□□□□ -1.08
USP46-204ENST00000503060 SETXQ7Z333 2677 aaKnown RBP8.32□□□□□ -1.08
USP46-204ENST00000503060 TRBV25-1A0A075B6N4 114 aa8.31□□□□□ -1.08
USP46-204ENST00000503060 TMEM263Q8WUH6 116 aaKnown RBP8.31□□□□□ -1.08
USP46-204ENST00000503060 TRGV1A0A0A0MS02 117 aa8.31□□□□□ -1.08
USP46-204ENST00000503060 C11orf86A6NJI1 115 aa8.31□□□□□ -1.08
USP46-204ENST00000503060 ETDBQ3ZM63 59 aa8.31□□□□□ -1.08
USP46-204ENST00000503060 PAPPA-AS1Q5QFB9 102 aa8.31□□□□□ -1.08
USP46-204ENST00000503060 APOMO95445 188 aa8.3□□□□□ -1.08
USP46-204ENST00000503060 CHAC1Q9BUX1 264 aa8.3□□□□□ -1.08
USP46-204ENST00000503060 E9PLD3 99 aa8.3□□□□□ -1.08
USP46-204ENST00000503060 OPRPNQ99935 248 aaPredicted RBP8.3□□□□□ -1.08
USP46-204ENST00000503060 OTOGQ6ZRI0 2925 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms