RNA–Protein interactions for RNA: ENST00000502991.5

RFC1-205, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-205ENST00000502991 ARL17AQ8IVW1 177 aa2.38□□□□□ -2.03
RFC1-205ENST00000502991 LINC00304Q8N9R0 145 aa2.38□□□□□ -2.03
RFC1-205ENST00000502991 ATP6V0E2Q8NHE4 81 aa2.38□□□□□ -2.03
RFC1-205ENST00000502991 SPACA4Q8TDM5 124 aa2.38□□□□□ -2.03
RFC1-205ENST00000502991 COPS9Q8WXC6 57 aa2.38□□□□□ -2.03
RFC1-205ENST00000502991 V9GYS6 101 aa2.38□□□□□ -2.03
RFC1-205ENST00000502991 FAM186AA6NE01 2351 aa2.38□□□□□ -2.03
RFC1-205ENST00000502991 CNOT1A5YKK6 2376 aaKnown RBP2.37□□□□□ -2.03
RFC1-205ENST00000502991 ZFHX2Q9C0A1 2572 aaPredicted RBP2.37□□□□□ -2.03
RFC1-205ENST00000502991 TRAPPC2P0DI81 140 aa2.37□□□□□ -2.03
RFC1-205ENST00000502991 TRAPPC2BP0DI82 140 aa2.37□□□□□ -2.03
RFC1-205ENST00000502991 FAUP35544 74 aaKnown RBP2.37□□□□□ -2.03
RFC1-205ENST00000502991 RPS27P42677 84 aaKnown RBP2.37□□□□□ -2.03
RFC1-205ENST00000502991 CAV3P56539 151 aa2.37□□□□□ -2.03
RFC1-205ENST00000502991 MIC13Q5XKP0 118 aa2.37□□□□□ -2.03
RFC1-205ENST00000502991 KRTAP26-1Q6PEX3 210 aa2.37□□□□□ -2.03
RFC1-205ENST00000502991 MED12LQ86YW9 2145 aa2.37□□□□□ -2.03
RFC1-205ENST00000502991 TOMM5Q8N4H5 51 aa2.37□□□□□ -2.03
RFC1-205ENST00000502991 SMIM4Q8WVI0 70 aa2.37□□□□□ -2.03
RFC1-205ENST00000502991 S100A13Q99584 98 aa2.37□□□□□ -2.03
RFC1-205ENST00000502991 SMIM7Q9BQ49 75 aa2.37□□□□□ -2.03
RFC1-205ENST00000502991 AGPAT4-IT1Q9H0P7 198 aa2.37□□□□□ -2.03
RFC1-205ENST00000502991 ZFP30Q9Y2G7 519 aa2.37□□□□□ -2.03
RFC1-205ENST00000502991 NOP16Q9Y3C1 178 aaKnown RBP2.37□□□□□ -2.03
RFC1-205ENST00000502991 PTPRZ1P23471 2315 aaPredicted RBP2.37□□□□□ -2.03
RFC1-205ENST00000502991 FREM1Q5H8C1 2179 aa2.36□□□□□ -2.03
RFC1-205ENST00000502991 MED12Q93074 2177 aa2.36□□□□□ -2.03
RFC1-205ENST00000502991 TMEM14DPA8MWL7 114 aa2.36□□□□□ -2.03
RFC1-205ENST00000502991 HIST1H1DP16402 221 aaKnown RBP2.36□□□□□ -2.03
RFC1-205ENST00000502991 CASC2Q6XLA1 102 aa2.36□□□□□ -2.03
RFC1-205ENST00000502991 FOXI2Q6ZQN5 318 aa2.36□□□□□ -2.03
RFC1-205ENST00000502991 ZNF833PQ6ZTB9 187 aa2.36□□□□□ -2.03
RFC1-205ENST00000502991 SNX29P2Q8IUI4 249 aa2.36□□□□□ -2.03
RFC1-205ENST00000502991 Q8TAT8 98 aa2.36□□□□□ -2.03
RFC1-205ENST00000502991 SEC11CQ9BY50 192 aa2.36□□□□□ -2.03
RFC1-205ENST00000502991 TTTY10Q9BZA0 68 aa2.36□□□□□ -2.03
RFC1-205ENST00000502991 ATG5Q9H1Y0 275 aa2.36□□□□□ -2.03
RFC1-205ENST00000502991 NAA60Q9H7X0 242 aa2.36□□□□□ -2.03
RFC1-205ENST00000502991 MYO7BQ6PIF6 2116 aa2.36□□□□□ -2.03
RFC1-205ENST00000502991 LOC400499M0QZD8 3231 aa2.36□□□□□ -2.03
RFC1-205ENST00000502991 FRYQ5TBA9 3013 aa2.36□□□□□ -2.03
RFC1-205ENST00000502991 RTTNQ86VV8 2226 aa2.36□□□□□ -2.03
RFC1-205ENST00000502991 CELSR3Q9NYQ7 3312 aa2.35□□□□□ -2.03
RFC1-205ENST00000502991 URB1O60287 2271 aaKnown RBP2.35□□□□□ -2.03
RFC1-205ENST00000502991 MUC6Q6W4X9 2439 aa2.35□□□□□ -2.03
RFC1-205ENST00000502991 CFAP47Q6ZTR5 3102 aa2.35□□□□□ -2.03
RFC1-205ENST00000502991 SNRPGP15A8MWD9 76 aa2.35□□□□□ -2.03
RFC1-205ENST00000502991 CYB5AP00167 134 aa2.35□□□□□ -2.03
RFC1-205ENST00000502991 IL5P05113 134 aa2.35□□□□□ -2.03
RFC1-205ENST00000502991 TPPP2P59282 170 aa2.35□□□□□ -2.03
RFC1-205ENST00000502991 CNBPP62633 177 aaKnown RBP2.35□□□□□ -2.03
RFC1-205ENST00000502991 MIR22HGQ0VDD5 57 aa2.35□□□□□ -2.03
RFC1-205ENST00000502991 C1orf137Q5JT78 98 aa2.35□□□□□ -2.03
RFC1-205ENST00000502991 HCP5Q6MZN7 132 aa2.35□□□□□ -2.03
RFC1-205ENST00000502991 TEX261Q6UWH6 196 aa2.35□□□□□ -2.03
RFC1-205ENST00000502991 SCP2D1Q9UJQ7 156 aa2.35□□□□□ -2.03
RFC1-205ENST00000502991 GVINP1Q7Z2Y8 2422 aa2.34□□□□□ -2.03
RFC1-205ENST00000502991 CACNA1GO43497 2377 aa2.34□□□□□ -2.03
RFC1-205ENST00000502991 PIGBOS1A0A0B4J2F0 54 aa2.34□□□□□ -2.03
RFC1-205ENST00000502991 TRGV4A0A0C4DH28 118 aa2.34□□□□□ -2.03
RFC1-205ENST00000502991 IQCF6A8MYZ5 107 aa2.34□□□□□ -2.03
RFC1-205ENST00000502991 H3BRN7 92 aa2.34□□□□□ -2.03
RFC1-205ENST00000502991 NDUFB6O95139 128 aa2.34□□□□□ -2.03
RFC1-205ENST00000502991 BRS3P32247 399 aa2.34□□□□□ -2.03
RFC1-205ENST00000502991 MPV17LQ2QL34 196 aa2.34□□□□□ -2.03
RFC1-205ENST00000502991 ZNF431Q8TF32 576 aaPredicted RBP2.34□□□□□ -2.03
RFC1-205ENST00000502991 SPANXDQ9BXN6 97 aa2.34□□□□□ -2.03
RFC1-205ENST00000502991 HEATR1Q9H583 2144 aaKnown RBP2.34□□□□□ -2.03
RFC1-205ENST00000502991 DMXL2Q8TDJ6 3036 aa2.34□□□□□ -2.03
RFC1-205ENST00000502991 PRRC2CQ9Y520 2896 aaKnown RBP2.34□□□□□ -2.04
RFC1-205ENST00000502991 DCHS1Q96JQ0 3298 aa2.34□□□□□ -2.04
RFC1-205ENST00000502991 CEP250Q9BV73 2442 aa2.33□□□□□ -2.04
RFC1-205ENST00000502991 INTS1Q8N201 2190 aaKnown RBP2.33□□□□□ -2.04
RFC1-205ENST00000502991 ZFHX4Q86UP3 3567 aa2.33□□□□□ -2.04
RFC1-205ENST00000502991 DIDO1Q9BTC0 2240 aaKnown RBP2.33□□□□□ -2.04
RFC1-205ENST00000502991 TRAV14DV4A0A0A6YYC5 116 aa2.33□□□□□ -2.04
RFC1-205ENST00000502991 A6NIN4 97 aa2.33□□□□□ -2.04
RFC1-205ENST00000502991 CCL25O15444 150 aa2.33□□□□□ -2.04
RFC1-205ENST00000502991 GNG2P59768 71 aa2.33□□□□□ -2.04
RFC1-205ENST00000502991 Q56UQ5 140 aa2.33□□□□□ -2.04
RFC1-205ENST00000502991 SLC25A26Q70HW3 274 aa2.33□□□□□ -2.04
RFC1-205ENST00000502991 VSTM2AQ8TAG5 236 aa2.33□□□□□ -2.04
RFC1-205ENST00000502991 C4orf3Q8WVX3 66 aa2.33□□□□□ -2.04
RFC1-205ENST00000502991 ASPMQ8IZT6 3477 aa2.32□□□□□ -2.04
RFC1-205ENST00000502991 MGAQ8IWI9 3026 aa2.32□□□□□ -2.04
RFC1-205ENST00000502991 ZGRF1Q86YA3 2104 aa2.32□□□□□ -2.04
RFC1-205ENST00000502991 SPRR5A0A1B0GTR4 108 aa2.32□□□□□ -2.04
RFC1-205ENST00000502991 TMEM218A2RU14 115 aa2.32□□□□□ -2.04
RFC1-205ENST00000502991 MCRIP1C9JLW8 97 aa2.32□□□□□ -2.04
RFC1-205ENST00000502991 H3BSH0 61 aa2.32□□□□□ -2.04
RFC1-205ENST00000502991 GTF2H5Q6ZYL4 71 aa2.32□□□□□ -2.04
RFC1-205ENST00000502991 LYPD1Q8N2G4 141 aa2.32□□□□□ -2.04
RFC1-205ENST00000502991 ARHGAP5-AS1Q96IT6 56 aa2.32□□□□□ -2.04
RFC1-205ENST00000502991 RPRMQ9NS64 109 aa2.32□□□□□ -2.04
RFC1-205ENST00000502991 SERP1Q9Y6X1 66 aa2.32□□□□□ -2.04
RFC1-205ENST00000502991 AKAP13Q12802 2813 aa2.32□□□□□ -2.04
RFC1-205ENST00000502991 ACACAQ13085 2346 aa2.32□□□□□ -2.04
RFC1-205ENST00000502991 TRAV30A0A087WSZ9 112 aa2.31□□□□□ -2.04
RFC1-205ENST00000502991 GEMIN2O14893 280 aaKnown RBP2.31□□□□□ -2.04
RFC1-205ENST00000502991 ADCYAP1P18509 176 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms