RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 TMEM18Q96B42 140 aa16.61■□□□□ 0.25
LSM6-202ENST00000502781 TMEM101Q96IK0 257 aa16.61■□□□□ 0.25
LSM6-202ENST00000502781 ALKBH7Q9BT30 221 aaPredicted RBP16.61■□□□□ 0.25
LSM6-202ENST00000502781 CDC42SE2Q9NRR3 84 aa16.61■□□□□ 0.25
LSM6-202ENST00000502781 RAB5AP20339 215 aa16.6■□□□□ 0.25
LSM6-202ENST00000502781 SMCO4Q9NRQ5 59 aa16.6■□□□□ 0.25
LSM6-202ENST00000502781 K7EMI3 77 aa16.59■□□□□ 0.25
LSM6-202ENST00000502781 SMAGPQ0VAQ4 97 aa16.59■□□□□ 0.25
LSM6-202ENST00000502781 FABP9Q0Z7S8 132 aa16.59■□□□□ 0.25
LSM6-202ENST00000502781 CBLN2Q8IUK8 224 aa16.59■□□□□ 0.25
LSM6-202ENST00000502781 NXT2Q9NPJ8 142 aaKnown RBP16.59■□□□□ 0.25
LSM6-202ENST00000502781 RPL39P62891 51 aaKnown RBP16.58■□□□□ 0.24
LSM6-202ENST00000502781 BAALCQ8WXS3 180 aa16.58■□□□□ 0.24
LSM6-202ENST00000502781 IGLV10-54A0A075B6I4 117 aa16.57■□□□□ 0.24
LSM6-202ENST00000502781 ZNF664Q8N3J9 261 aa16.57■□□□□ 0.24
LSM6-202ENST00000502781 Q8N814 137 aa16.57■□□□□ 0.24
LSM6-202ENST00000502781 PGPEP1Q9NXJ5 209 aa16.57■□□□□ 0.24
LSM6-202ENST00000502781 TRAPPC1Q9Y5R8 145 aa16.57■□□□□ 0.24
LSM6-202ENST00000502781 IFI27P40305 119 aaPredicted RBP16.56■□□□□ 0.24
LSM6-202ENST00000502781 DGAT2L7PQ6IED9 249 aa16.55■□□□□ 0.24
LSM6-202ENST00000502781 FAM104AQ969W3 186 aa16.55■□□□□ 0.24
LSM6-202ENST00000502781 CDPF1Q6NVV7 123 aa16.54■□□□□ 0.24
LSM6-202ENST00000502781 SPANXA1Q9NS26 97 aa16.54■□□□□ 0.24
LSM6-202ENST00000502781 DNAH5Q8TE73 4624 aa16.54■□□□□ 0.24
LSM6-202ENST00000502781 LECT2O14960 151 aa16.53■□□□□ 0.24
LSM6-202ENST00000502781 ORMDL2Q53FV1 153 aa16.53■□□□□ 0.24
LSM6-202ENST00000502781 IGKV3OR2-268A0A0C4DH90 116 aa16.52■□□□□ 0.24
LSM6-202ENST00000502781 LINC00959A0A1B0GUT2 108 aa16.51■□□□□ 0.23
LSM6-202ENST00000502781 LINC01546A6NGU7 62 aa16.51■□□□□ 0.23
LSM6-202ENST00000502781 C16orf90A8MZG2 172 aa16.51■□□□□ 0.23
LSM6-202ENST00000502781 Q6ZUT4 128 aa16.51■□□□□ 0.23
LSM6-202ENST00000502781 NTN5Q8WTR8 489 aaPredicted RBP16.51■□□□□ 0.23
LSM6-202ENST00000502781 PYGO1Q9Y3Y4 419 aa16.51■□□□□ 0.23
LSM6-202ENST00000502781 MRPS36P82909 103 aaKnown RBP16.51■□□□□ 0.23
LSM6-202ENST00000502781 CHCHD10Q8WYQ3 142 aaPredicted RBP16.51■□□□□ 0.23
LSM6-202ENST00000502781 LRP1BQ9NZR2 4599 aa16.5■□□□□ 0.23
LSM6-202ENST00000502781 FUSP35637 526 aaKnown RBP eCLIP16.5■□□□□ 0.23
LSM6-202ENST00000502781 PRSS3P2Q8NHM4 247 aa16.5■□□□□ 0.23
LSM6-202ENST00000502781 C2orf66Q6UXQ4 117 aa16.49■□□□□ 0.23
LSM6-202ENST00000502781 CYSLTR1Q9Y271 337 aa16.49■□□□□ 0.23
LSM6-202ENST00000502781 USP17L23D6RBM5 183 aa16.48■□□□□ 0.23
LSM6-202ENST00000502781 RNASE13Q5GAN3 156 aaKnown RBP16.48■□□□□ 0.23
LSM6-202ENST00000502781 GAGE12HA6NDE8 117 aa16.47■□□□□ 0.23
LSM6-202ENST00000502781 C18orf32Q8TCD1 76 aa16.47■□□□□ 0.23
LSM6-202ENST00000502781 OPRPNQ99935 248 aaPredicted RBP16.47■□□□□ 0.23
LSM6-202ENST00000502781 CCL25O15444 150 aa16.46■□□□□ 0.23
LSM6-202ENST00000502781 C14orf177Q52M58 125 aa16.46■□□□□ 0.23
LSM6-202ENST00000502781 SS18Q15532 418 aa16.45■□□□□ 0.22
LSM6-202ENST00000502781 C1orf196B1AJZ1 125 aa16.44■□□□□ 0.22
LSM6-202ENST00000502781 G0S2P27469 103 aa16.44■□□□□ 0.22
LSM6-202ENST00000502781 FOXI1Q12951 378 aa16.44■□□□□ 0.22
LSM6-202ENST00000502781 IGLV4-3A0A075B6K6 122 aa16.43■□□□□ 0.22
LSM6-202ENST00000502781 IGLV5-52A0A0A0MRZ9 124 aa16.43■□□□□ 0.22
LSM6-202ENST00000502781 KIAA1109Q2LD37 5005 aa16.42■□□□□ 0.22
LSM6-202ENST00000502781 IGIPA6NJ69 53 aa16.42■□□□□ 0.22
LSM6-202ENST00000502781 COLCA2A8K830 154 aa16.42■□□□□ 0.22
LSM6-202ENST00000502781 NPSP0C0P6 89 aa16.42■□□□□ 0.22
LSM6-202ENST00000502781 XCL1P47992 114 aa16.42■□□□□ 0.22
LSM6-202ENST00000502781 CD164L2Q6UWJ8 174 aa16.42■□□□□ 0.22
LSM6-202ENST00000502781 TOMM6Q96B49 74 aa16.42■□□□□ 0.22
LSM6-202ENST00000502781 URB1-AS1Q96HZ7 61 aa16.42■□□□□ 0.22
LSM6-202ENST00000502781 IGLV2-33A0A075B6J2 118 aaPredicted RBP16.41■□□□□ 0.22
LSM6-202ENST00000502781 TRAV13-1A0A0B4J241 112 aa16.41■□□□□ 0.22
LSM6-202ENST00000502781 FA2HQ7L5A8 372 aa16.41■□□□□ 0.22
LSM6-202ENST00000502781 PRSS1P07477 247 aa16.4■□□□□ 0.22
LSM6-202ENST00000502781 TMEM141Q96I45 108 aa16.4■□□□□ 0.22
LSM6-202ENST00000502781 GCSHP23434 173 aa16.38■□□□□ 0.21
LSM6-202ENST00000502781 C15orf56Q8N910 161 aa16.38■□□□□ 0.21
LSM6-202ENST00000502781 TIMM17AQ99595 171 aa16.38■□□□□ 0.21
LSM6-202ENST00000502781 AP5S1Q9NUS5 200 aa16.38■□□□□ 0.21
LSM6-202ENST00000502781 LINC01549A6NIU2 74 aa16.38■□□□□ 0.21
LSM6-202ENST00000502781 SCO1O75880 301 aa16.37■□□□□ 0.21
LSM6-202ENST00000502781 LINC00614P0C842 121 aa16.37■□□□□ 0.21
LSM6-202ENST00000502781 KRTAP10-1P60331 282 aa16.37■□□□□ 0.21
LSM6-202ENST00000502781 AMELXQ99217 191 aa16.37■□□□□ 0.21
LSM6-202ENST00000502781 IFITM10A6NMD0 228 aa16.36■□□□□ 0.21
LSM6-202ENST00000502781 TRGC2P03986 189 aa16.36■□□□□ 0.21
LSM6-202ENST00000502781 CFAP161Q6P656 301 aa16.36■□□□□ 0.21
LSM6-202ENST00000502781 LINC00173Q6ZV60 143 aa16.36■□□□□ 0.21
LSM6-202ENST00000502781 ERASQ7Z444 233 aa16.36■□□□□ 0.21
LSM6-202ENST00000502781 TEX43Q6ZNM6 134 aa16.35■□□□□ 0.21
LSM6-202ENST00000502781 A0A096LNJ9 63 aa16.34■□□□□ 0.21
LSM6-202ENST00000502781 RAB5BP61020 215 aa16.33■□□□□ 0.2
LSM6-202ENST00000502781 Q6ZN92 141 aa16.33■□□□□ 0.2
LSM6-202ENST00000502781 GVQW2A0A096LPI5 108 aaPredicted RBP16.32■□□□□ 0.2
LSM6-202ENST00000502781 hDV102S1A0JD36 115 aa16.32■□□□□ 0.2
LSM6-202ENST00000502781 CDK2AP2O75956 126 aa16.32■□□□□ 0.2
LSM6-202ENST00000502781 PAPPA-AS1Q5QFB9 102 aa16.32■□□□□ 0.2
LSM6-202ENST00000502781 SCGB3A1Q96QR1 104 aa16.32■□□□□ 0.2
LSM6-202ENST00000502781 VCX2Q9H322 139 aa16.32■□□□□ 0.2
LSM6-202ENST00000502781 APOBP04114 4563 aaKnown RBP16.31■□□□□ 0.2
LSM6-202ENST00000502781 IGHV3OR16-9A0A0B4J2B5 98 aa16.31■□□□□ 0.2
LSM6-202ENST00000502781 UBE2D1P51668 147 aa16.31■□□□□ 0.2
LSM6-202ENST00000502781 CNBPP62633 177 aaKnown RBP16.31■□□□□ 0.2
LSM6-202ENST00000502781 ZC2HC1BQ5TFG8 222 aa16.31■□□□□ 0.2
LSM6-202ENST00000502781 RYR1P21817 5038 aa16.3■□□□□ 0.2
LSM6-202ENST00000502781 COX7A2LO14548 114 aa16.3■□□□□ 0.2
LSM6-202ENST00000502781 SLPIP03973 132 aa16.3■□□□□ 0.2
LSM6-202ENST00000502781 LINC00242Q5T6M2 205 aa16.3■□□□□ 0.2
LSM6-202ENST00000502781 IGHV1-58A0A0C4DH39 117 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms