RNA–Protein interactions for RNA: ENST00000502443.1

USP46-203, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-203ENST00000502443 TRAPPC1Q9Y5R8 145 aa4.85□□□□□ -1.63
USP46-203ENST00000502443 PKD1P98161 4303 aa4.84□□□□□ -1.63
USP46-203ENST00000502443 C5orf52A6NGY3 159 aa4.84□□□□□ -1.63
USP46-203ENST00000502443 MT-ND6P03923 174 aa4.84□□□□□ -1.63
USP46-203ENST00000502443 FGF6P10767 208 aa4.84□□□□□ -1.63
USP46-203ENST00000502443 SNRPEP62304 92 aaKnown RBP4.84□□□□□ -1.63
USP46-203ENST00000502443 COX19Q49B96 90 aa4.84□□□□□ -1.63
USP46-203ENST00000502443 CDPF1Q6NVV7 123 aa4.84□□□□□ -1.63
USP46-203ENST00000502443 ORMDL3Q8N138 153 aa4.84□□□□□ -1.63
USP46-203ENST00000502443 Q8N814 137 aa4.84□□□□□ -1.63
USP46-203ENST00000502443 C20orf78Q9BR46 151 aa4.84□□□□□ -1.63
USP46-203ENST00000502443 MRPL18Q9H0U6 180 aaKnown RBP4.84□□□□□ -1.63
USP46-203ENST00000502443 BIRC6Q9NR09 4857 aa4.84□□□□□ -1.63
USP46-203ENST00000502443 IGLV10-54A0A075B6I4 117 aa4.83□□□□□ -1.64
USP46-203ENST00000502443 IGKV3OR2-268A0A0C4DH90 116 aa4.83□□□□□ -1.64
USP46-203ENST00000502443 NPYP01303 97 aa4.83□□□□□ -1.64
USP46-203ENST00000502443 HLA-DQA1P01909 254 aa4.83□□□□□ -1.64
USP46-203ENST00000502443 ESDP10768 282 aa4.83□□□□□ -1.64
USP46-203ENST00000502443 ZNF25P17030 456 aaPredicted RBP4.83□□□□□ -1.64
USP46-203ENST00000502443 NDUFA6P56556 154 aa4.83□□□□□ -1.64
USP46-203ENST00000502443 WFDC2Q14508 124 aa4.83□□□□□ -1.64
USP46-203ENST00000502443 COA6Q5JTJ3 125 aaKnown RBP4.83□□□□□ -1.64
USP46-203ENST00000502443 TMEM101Q96IK0 257 aa4.83□□□□□ -1.64
USP46-203ENST00000502443 PRELID3AQ96N28 172 aa4.83□□□□□ -1.64
USP46-203ENST00000502443 SMIM2Q9BVW6 85 aa4.83□□□□□ -1.64
USP46-203ENST00000502443 PKHD1P08F94 4074 aa4.83□□□□□ -1.64
USP46-203ENST00000502443 IGLV5-52A0A0A0MRZ9 124 aa4.82□□□□□ -1.64
USP46-203ENST00000502443 TRAV8-4A0A0B4J246 113 aa4.82□□□□□ -1.64
USP46-203ENST00000502443 IFITM10A6NMD0 228 aa4.82□□□□□ -1.64
USP46-203ENST00000502443 RPL32P62910 135 aaKnown RBP4.82□□□□□ -1.64
USP46-203ENST00000502443 KIAA1644Q3SXP7 199 aa4.82□□□□□ -1.64
USP46-203ENST00000502443 OR5A1Q8NGJ0 315 aa4.82□□□□□ -1.64
USP46-203ENST00000502443 NTN5Q8WTR8 489 aaPredicted RBP4.82□□□□□ -1.64
USP46-203ENST00000502443 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.81□□□□□ -1.64
USP46-203ENST00000502443 LOC389332A0A1B0GUA5 103 aa4.81□□□□□ -1.64
USP46-203ENST00000502443 TCAPO15273 167 aa4.81□□□□□ -1.64
USP46-203ENST00000502443 S100A6P06703 90 aa4.81□□□□□ -1.64
USP46-203ENST00000502443 GCSHP23434 173 aa4.81□□□□□ -1.64
USP46-203ENST00000502443 SMAGPQ0VAQ4 97 aa4.81□□□□□ -1.64
USP46-203ENST00000502443 DGAT2L7PQ6IED9 249 aa4.81□□□□□ -1.64
USP46-203ENST00000502443 TMEM18Q96B42 140 aa4.81□□□□□ -1.64
USP46-203ENST00000502443 MAP1LC3AQ9H492 121 aa4.81□□□□□ -1.64
USP46-203ENST00000502443 LAMTOR2Q9Y2Q5 125 aa4.81□□□□□ -1.64
USP46-203ENST00000502443 USP17L23D6RBM5 183 aa4.8□□□□□ -1.64
USP46-203ENST00000502443 NUPR1O60356 82 aa4.8□□□□□ -1.64
USP46-203ENST00000502443 LINC00310P59036 64 aa4.8□□□□□ -1.64
USP46-203ENST00000502443 C14orf177Q52M58 125 aa4.8□□□□□ -1.64
USP46-203ENST00000502443 KRTAP26-1Q6PEX3 210 aa4.8□□□□□ -1.64
USP46-203ENST00000502443 MRPL52Q86TS9 123 aaKnown RBP4.8□□□□□ -1.64
USP46-203ENST00000502443 HIST3H2BBQ8N257 126 aa4.8□□□□□ -1.64
USP46-203ENST00000502443 ZNF664Q8N3J9 261 aa4.8□□□□□ -1.64
USP46-203ENST00000502443 ALKBH7Q9BT30 221 aaPredicted RBP4.8□□□□□ -1.64
USP46-203ENST00000502443 CDC42SE2Q9NRR3 84 aa4.8□□□□□ -1.64
USP46-203ENST00000502443 UBE2D4Q9Y2X8 147 aa4.8□□□□□ -1.64
USP46-203ENST00000502443 DNAH11Q96DT5 4516 aa4.79□□□□□ -1.64
USP46-203ENST00000502443 GAGE12HA6NDE8 117 aa4.79□□□□□ -1.64
USP46-203ENST00000502443 PRSS47A8MTI9 375 aa4.79□□□□□ -1.64
USP46-203ENST00000502443 CDK2AP2O75956 126 aa4.79□□□□□ -1.64
USP46-203ENST00000502443 KRTAP10-1P60331 282 aa4.79□□□□□ -1.64
USP46-203ENST00000502443 RPL39P62891 51 aaKnown RBP4.79□□□□□ -1.64
USP46-203ENST00000502443 CHCHD10Q8WYQ3 142 aaPredicted RBP4.79□□□□□ -1.64
USP46-203ENST00000502443 CSDC2Q9Y534 153 aaKnown RBP4.79□□□□□ -1.64
USP46-203ENST00000502443 LINC00959A0A1B0GUT2 108 aa4.78□□□□□ -1.64
USP46-203ENST00000502443 PRSS1P07477 247 aa4.78□□□□□ -1.64
USP46-203ENST00000502443 XCL1P47992 114 aa4.78□□□□□ -1.64
USP46-203ENST00000502443 SS18Q15532 418 aa4.78□□□□□ -1.64
USP46-203ENST00000502443 RNASE13Q5GAN3 156 aaKnown RBP4.78□□□□□ -1.64
USP46-203ENST00000502443 Q8N8P6 123 aa4.78□□□□□ -1.64
USP46-203ENST00000502443 C18orf32Q8TCD1 76 aa4.78□□□□□ -1.64
USP46-203ENST00000502443 TIMM21Q9BVV7 248 aa4.78□□□□□ -1.64
USP46-203ENST00000502443 hDV102S1A0JD36 115 aa4.77□□□□□ -1.65
USP46-203ENST00000502443 CCL25O15444 150 aa4.77□□□□□ -1.65
USP46-203ENST00000502443 SERF1AO75920 110 aa4.77□□□□□ -1.65
USP46-203ENST00000502443 IFI27P40305 119 aaPredicted RBP4.77□□□□□ -1.65
USP46-203ENST00000502443 LINC01620Q4KN68 170 aa4.77□□□□□ -1.65
USP46-203ENST00000502443 PDZD11Q5EBL8 140 aa4.77□□□□□ -1.65
USP46-203ENST00000502443 Q6ZUT4 128 aa4.77□□□□□ -1.65
USP46-203ENST00000502443 BAGE3Q86Y29 109 aa4.77□□□□□ -1.65
USP46-203ENST00000502443 URB1-AS1Q96HZ7 61 aa4.77□□□□□ -1.65
USP46-203ENST00000502443 HIST1H2BLQ99880 126 aa4.77□□□□□ -1.65
USP46-203ENST00000502443 NXT2Q9NPJ8 142 aaKnown RBP4.77□□□□□ -1.65
USP46-203ENST00000502443 SPANXA1Q9NS26 97 aa4.77□□□□□ -1.65
USP46-203ENST00000502443 TRAV13-1A0A0B4J241 112 aa4.76□□□□□ -1.65
USP46-203ENST00000502443 K7EMI3 77 aa4.76□□□□□ -1.65
USP46-203ENST00000502443 FOXI1Q12951 378 aa4.76□□□□□ -1.65
USP46-203ENST00000502443 ORMDL2Q53FV1 153 aa4.76□□□□□ -1.65
USP46-203ENST00000502443 CFAP161Q6P656 301 aa4.76□□□□□ -1.65
USP46-203ENST00000502443 CD164L2Q6UWJ8 174 aa4.76□□□□□ -1.65
USP46-203ENST00000502443 PRSS3P2Q8NHM4 247 aa4.76□□□□□ -1.65
USP46-203ENST00000502443 OPRPNQ99935 248 aaPredicted RBP4.76□□□□□ -1.65
USP46-203ENST00000502443 CYSLTR1Q9Y271 337 aa4.76□□□□□ -1.65
USP46-203ENST00000502443 FABP4P15090 132 aa4.75□□□□□ -1.65
USP46-203ENST00000502443 AKR1D1P51857 326 aa4.75□□□□□ -1.65
USP46-203ENST00000502443 XGP55808 180 aa4.75□□□□□ -1.65
USP46-203ENST00000502443 MRPS36P82909 103 aaKnown RBP4.75□□□□□ -1.65
USP46-203ENST00000502443 C2orf66Q6UXQ4 117 aa4.75□□□□□ -1.65
USP46-203ENST00000502443 C15orf56Q8N910 161 aa4.75□□□□□ -1.65
USP46-203ENST00000502443 FAM104AQ969W3 186 aa4.75□□□□□ -1.65
USP46-203ENST00000502443 AP5S1Q9NUS5 200 aa4.75□□□□□ -1.65
USP46-203ENST00000502443 PYGO1Q9Y3Y4 419 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms