RNA–Protein interactions for RNA: ENST00000498367.1

PDCD4-211, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 975 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-211ENST00000498367 TRBV30A0A0K0K1B3 111 aa4.56□□□□□ -1.68
PDCD4-211ENST00000498367 HCRTO43612 131 aa4.56□□□□□ -1.68
PDCD4-211ENST00000498367 PPP1R17O96001 155 aa4.56□□□□□ -1.68
PDCD4-211ENST00000498367 PPYP01298 95 aa4.56□□□□□ -1.68
PDCD4-211ENST00000498367 P0C880 135 aa4.56□□□□□ -1.68
PDCD4-211ENST00000498367 SPAG11BQ08648 103 aa4.56□□□□□ -1.68
PDCD4-211ENST00000498367 KPRPQ5T749 579 aaPredicted RBP4.56□□□□□ -1.68
PDCD4-211ENST00000498367 SPAG11AQ6PDA7 123 aa4.56□□□□□ -1.68
PDCD4-211ENST00000498367 RREB1Q92766 1687 aa4.56□□□□□ -1.68
PDCD4-211ENST00000498367 MYOFQ9NZM1 2061 aa4.56□□□□□ -1.68
PDCD4-211ENST00000498367 LRRC37A3O60309 1634 aa4.56□□□□□ -1.68
PDCD4-211ENST00000498367 NHSL1Q5SYE7 1610 aa4.55□□□□□ -1.68
PDCD4-211ENST00000498367 A0A0J9YY99 117 aa4.55□□□□□ -1.68
PDCD4-211ENST00000498367 TRBV7-4A0A0J9YYF1 115 aa4.55□□□□□ -1.68
PDCD4-211ENST00000498367 NUPR2A6NF83 97 aa4.55□□□□□ -1.68
PDCD4-211ENST00000498367 IGHV3-30P01768 117 aa4.55□□□□□ -1.68
PDCD4-211ENST00000498367 IGHV3-30-5P0DP03 117 aa4.55□□□□□ -1.68
PDCD4-211ENST00000498367 LCE1AQ5T7P2 110 aa4.55□□□□□ -1.68
PDCD4-211ENST00000498367 CSAG1Q6PB30 78 aa4.55□□□□□ -1.68
PDCD4-211ENST00000498367 HEATR1Q9H583 2144 aaKnown RBP4.54□□□□□ -1.68
PDCD4-211ENST00000498367 NDUFB1O75438 58 aa4.54□□□□□ -1.68
PDCD4-211ENST00000498367 PDE6HQ13956 83 aa4.54□□□□□ -1.68
PDCD4-211ENST00000498367 PRR15LQ9BU68 103 aa4.54□□□□□ -1.68
PDCD4-211ENST00000498367 KLK12Q9UKR0 248 aa4.54□□□□□ -1.68
PDCD4-211ENST00000498367 C5P01031 1676 aa4.54□□□□□ -1.68
PDCD4-211ENST00000498367 COL14A1Q05707 1796 aaKnown RBP4.53□□□□□ -1.68
PDCD4-211ENST00000498367 DNAL4O96015 105 aa4.53□□□□□ -1.68
PDCD4-211ENST00000498367 FREM3P0C091 2139 aa4.53□□□□□ -1.68
PDCD4-211ENST00000498367 Q8N9P0 234 aaPredicted RBP4.53□□□□□ -1.68
PDCD4-211ENST00000498367 PSORS1C2Q9UIG4 136 aa4.53□□□□□ -1.68
PDCD4-211ENST00000498367 KIF25-AS1Q9Y6Z4 181 aa4.53□□□□□ -1.68
PDCD4-211ENST00000498367 NINQ8N4C6 2090 aa4.53□□□□□ -1.68
PDCD4-211ENST00000498367 PHRF1Q9P1Y6 1649 aaKnown RBP4.53□□□□□ -1.68
PDCD4-211ENST00000498367 TUBGCP6Q96RT7 1819 aa4.53□□□□□ -1.68
PDCD4-211ENST00000498367 ZNF236Q9UL36 1845 aa4.53□□□□□ -1.68
PDCD4-211ENST00000498367 BAZ2BQ9UIF8 2168 aaKnown RBP4.53□□□□□ -1.68
PDCD4-211ENST00000498367 IGLV4-69A0A075B6H9 119 aa4.52□□□□□ -1.69
PDCD4-211ENST00000498367 TRBV6-5A0A0K0K1A5 114 aa4.52□□□□□ -1.69
PDCD4-211ENST00000498367 CFC1P0CG37 223 aa4.52□□□□□ -1.69
PDCD4-211ENST00000498367 R4GMQ9 66 aa4.52□□□□□ -1.69
PDCD4-211ENST00000498367 DIDO1Q9BTC0 2240 aaKnown RBP4.52□□□□□ -1.69
PDCD4-211ENST00000498367 SHPRHQ149N8 1683 aa4.51□□□□□ -1.69
PDCD4-211ENST00000498367 MED13Q9UHV7 2174 aa4.51□□□□□ -1.69
PDCD4-211ENST00000498367 SIP14410 1827 aa4.51□□□□□ -1.69
PDCD4-211ENST00000498367 A0A1B0GUT8 65 aa4.51□□□□□ -1.69
PDCD4-211ENST00000498367 IFI6P09912 130 aa4.51□□□□□ -1.69
PDCD4-211ENST00000498367 HMGA1P17096 107 aaKnown RBP4.51□□□□□ -1.69
PDCD4-211ENST00000498367 Q9BRP9 147 aa4.51□□□□□ -1.69
PDCD4-211ENST00000498367 UBR3Q6ZT12 1888 aa4.51□□□□□ -1.69
PDCD4-211ENST00000498367 ADAMTS7Q9UKP4 1686 aa4.51□□□□□ -1.69
PDCD4-211ENST00000498367 NRXN3Q9Y4C0 1643 aa4.5□□□□□ -1.69
PDCD4-211ENST00000498367 RICTORQ6R327 1708 aa4.5□□□□□ -1.69
PDCD4-211ENST00000498367 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.5□□□□□ -1.69
PDCD4-211ENST00000498367 SNURFQ9Y675 71 aa4.5□□□□□ -1.69
PDCD4-211ENST00000498367 MPDZO75970 2070 aa4.5□□□□□ -1.69
PDCD4-211ENST00000498367 SDK2Q58EX2 2172 aa4.5□□□□□ -1.69
PDCD4-211ENST00000498367 TCF20Q9UGU0 1960 aaKnown RBP4.49□□□□□ -1.69
PDCD4-211ENST00000498367 MYO7AQ13402 2215 aa4.49□□□□□ -1.69
PDCD4-211ENST00000498367 S100A3P33764 101 aa4.49□□□□□ -1.69
PDCD4-211ENST00000498367 CNBPP62633 177 aaKnown RBP4.49□□□□□ -1.69
PDCD4-211ENST00000498367 KRTAP25-1Q3LHN0 102 aa4.49□□□□□ -1.69
PDCD4-211ENST00000498367 SHROOM3Q8TF72 1996 aa4.49□□□□□ -1.69
PDCD4-211ENST00000498367 PARP4Q9UKK3 1724 aaKnown RBP4.49□□□□□ -1.69
PDCD4-211ENST00000498367 HEATR5BQ9P2D3 2071 aa4.49□□□□□ -1.69
PDCD4-211ENST00000498367 KIF26BQ2KJY2 2108 aa4.48□□□□□ -1.69
PDCD4-211ENST00000498367 CLPSL1A2RUU4 121 aa4.48□□□□□ -1.69
PDCD4-211ENST00000498367 A8MU10 97 aa4.48□□□□□ -1.69
PDCD4-211ENST00000498367 F8VRH5 84 aa4.48□□□□□ -1.69
PDCD4-211ENST00000498367 WISP3O95389 354 aaPredicted RBP4.48□□□□□ -1.69
PDCD4-211ENST00000498367 FCER1GP30273 86 aa4.48□□□□□ -1.69
PDCD4-211ENST00000498367 SERF2P84101 59 aa4.48□□□□□ -1.69
PDCD4-211ENST00000498367 GDF5OSQ5U4N7 250 aa4.48□□□□□ -1.69
PDCD4-211ENST00000498367 CYYR1Q96J86 154 aa4.48□□□□□ -1.69
PDCD4-211ENST00000498367 PRR34Q9NV39 138 aa4.48□□□□□ -1.69
PDCD4-211ENST00000498367 TIAM2Q8IVF5 1701 aa4.48□□□□□ -1.69
PDCD4-211ENST00000498367 ABCC8Q09428 1581 aa4.48□□□□□ -1.69
PDCD4-211ENST00000498367 QSER1Q2KHR3 1735 aa4.47□□□□□ -1.69
PDCD4-211ENST00000498367 TRAV1-2A0A0B4J238 106 aa4.47□□□□□ -1.69
PDCD4-211ENST00000498367 C10orf142B7Z368 130 aa4.47□□□□□ -1.69
PDCD4-211ENST00000498367 SPINT4Q6UDR6 99 aa4.47□□□□□ -1.69
PDCD4-211ENST00000498367 ZGRF1Q86YA3 2104 aa4.47□□□□□ -1.69
PDCD4-211ENST00000498367 NUP214P35658 2090 aaPredicted RBP4.47□□□□□ -1.69
PDCD4-211ENST00000498367 LRP6O75581 1613 aa4.46□□□□□ -1.69
PDCD4-211ENST00000498367 KIAA0100Q14667 2235 aaKnown RBP4.46□□□□□ -1.69
PDCD4-211ENST00000498367 SNRPGP62308 76 aaKnown RBP4.46□□□□□ -1.7
PDCD4-211ENST00000498367 C9orf163Q8N9P6 203 aa4.46□□□□□ -1.7
PDCD4-211ENST00000498367 ANKRD36A6QL64 1941 aa4.46□□□□□ -1.7
PDCD4-211ENST00000498367 PAPPA2Q9BXP8 1791 aa4.45□□□□□ -1.7
PDCD4-211ENST00000498367 Q6ZTI0 123 aa4.45□□□□□ -1.7
PDCD4-211ENST00000498367 LINC00846Q9NV44 126 aa4.45□□□□□ -1.7
PDCD4-211ENST00000498367 IGKV3-7A0A075B6H7 116 aa4.44□□□□□ -1.7
PDCD4-211ENST00000498367 IGKV2-30P06310 120 aa4.44□□□□□ -1.7
PDCD4-211ENST00000498367 MGPP08493 103 aa4.44□□□□□ -1.7
PDCD4-211ENST00000498367 PI4KAP42356 2102 aa4.44□□□□□ -1.7
PDCD4-211ENST00000498367 ZNF563Q8TA94 476 aa4.44□□□□□ -1.7
PDCD4-211ENST00000498367 COX7B2Q8TF08 81 aa4.44□□□□□ -1.7
PDCD4-211ENST00000498367 LINC01558Q9Y6Z2 57 aa4.44□□□□□ -1.7
PDCD4-211ENST00000498367 NRXN2Q9P2S2 1712 aa4.43□□□□□ -1.7
PDCD4-211ENST00000498367 IGKV3D-7A0A0C4DH55 119 aa4.43□□□□□ -1.7
PDCD4-211ENST00000498367 UQCR11O14957 56 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms