RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-208ENST00000498223 RMI2Q96E14 147 aa7.72□□□□□ -1.17
CTTN-208ENST00000498223 SCGB3A1Q96QR1 104 aa7.72□□□□□ -1.17
CTTN-208ENST00000498223 TIMM21Q9BVV7 248 aa7.72□□□□□ -1.17
CTTN-208ENST00000498223 FRAS1Q86XX4 4008 aa7.72□□□□□ -1.17
CTTN-208ENST00000498223 LINC01546A6NGU7 62 aa7.71□□□□□ -1.18
CTTN-208ENST00000498223 PSCAO43653 123 aa7.71□□□□□ -1.18
CTTN-208ENST00000498223 RNASE13Q5GAN3 156 aaKnown RBP7.71□□□□□ -1.18
CTTN-208ENST00000498223 TOMM6Q96B49 74 aa7.71□□□□□ -1.18
CTTN-208ENST00000498223 URB1-AS1Q96HZ7 61 aa7.71□□□□□ -1.18
CTTN-208ENST00000498223 IGKV2D-24A0A075B6R9 120 aa7.7□□□□□ -1.18
CTTN-208ENST00000498223 LINC01549A6NIU2 74 aa7.7□□□□□ -1.18
CTTN-208ENST00000498223 HIST1H2BKO60814 126 aa7.7□□□□□ -1.18
CTTN-208ENST00000498223 SERF1AO75920 110 aa7.7□□□□□ -1.18
CTTN-208ENST00000498223 HBDP02042 147 aa7.7□□□□□ -1.18
CTTN-208ENST00000498223 HIST1H2BJP06899 126 aa7.7□□□□□ -1.18
CTTN-208ENST00000498223 HIST1H2BOP23527 126 aa7.7□□□□□ -1.18
CTTN-208ENST00000498223 HIST1H2BBP33778 126 aa7.7□□□□□ -1.18
CTTN-208ENST00000498223 NDUFA6P56556 154 aa7.7□□□□□ -1.18
CTTN-208ENST00000498223 HIST1H2BDP58876 126 aa7.7□□□□□ -1.18
CTTN-208ENST00000498223 HIST1H2BCP62807 126 aa7.7□□□□□ -1.18
CTTN-208ENST00000498223 HIST2H2BEQ16778 126 aa7.7□□□□□ -1.18
CTTN-208ENST00000498223 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.7□□□□□ -1.18
CTTN-208ENST00000498223 ENHOQ6UWT2 76 aa7.7□□□□□ -1.18
CTTN-208ENST00000498223 Q6ZN92 141 aa7.7□□□□□ -1.18
CTTN-208ENST00000498223 Q6ZUT4 128 aa7.7□□□□□ -1.18
CTTN-208ENST00000498223 HIST1H2BHQ93079 126 aa7.7□□□□□ -1.18
CTTN-208ENST00000498223 HIST1H2BNQ99877 126 aa7.7□□□□□ -1.18
CTTN-208ENST00000498223 HIST1H2BMQ99879 126 aa7.7□□□□□ -1.18
CTTN-208ENST00000498223 OPRPNQ99935 248 aaPredicted RBP7.7□□□□□ -1.18
CTTN-208ENST00000498223 C1orf43Q9BWL3 253 aa7.7□□□□□ -1.18
CTTN-208ENST00000498223 TM2D2Q9BX73 214 aa7.7□□□□□ -1.18
CTTN-208ENST00000498223 CDC42SE2Q9NRR3 84 aa7.7□□□□□ -1.18
CTTN-208ENST00000498223 CSDC2Q9Y534 153 aaKnown RBP7.7□□□□□ -1.18
CTTN-208ENST00000498223 VPS13DQ5THJ4 4388 aa7.7□□□□□ -1.18
CTTN-208ENST00000498223 IGLV10-54A0A075B6I4 117 aa7.69□□□□□ -1.18
CTTN-208ENST00000498223 SS18Q15532 418 aa7.69□□□□□ -1.18
CTTN-208ENST00000498223 MIAQ16674 131 aa7.69□□□□□ -1.18
CTTN-208ENST00000498223 FAM19A2Q8N3H0 131 aa7.69□□□□□ -1.18
CTTN-208ENST00000498223 TMEM141Q96I45 108 aa7.69□□□□□ -1.18
CTTN-208ENST00000498223 PYGO1Q9Y3Y4 419 aa7.69□□□□□ -1.18
CTTN-208ENST00000498223 IFITM10A6NMD0 228 aa7.68□□□□□ -1.18
CTTN-208ENST00000498223 MRPS36P82909 103 aaKnown RBP7.68□□□□□ -1.18
CTTN-208ENST00000498223 PAPPA-AS1Q5QFB9 102 aa7.68□□□□□ -1.18
CTTN-208ENST00000498223 TEX43Q6ZNM6 134 aa7.68□□□□□ -1.18
CTTN-208ENST00000498223 ERASQ7Z444 233 aa7.68□□□□□ -1.18
CTTN-208ENST00000498223 VCX2Q9H322 139 aa7.68□□□□□ -1.18
CTTN-208ENST00000498223 PRR34Q9NV39 138 aa7.68□□□□□ -1.18
CTTN-208ENST00000498223 DNAH10Q8IVF4 4471 aa7.68□□□□□ -1.18
CTTN-208ENST00000498223 IGLV4-3A0A075B6K6 122 aa7.67□□□□□ -1.18
CTTN-208ENST00000498223 TRAV13-1A0A0B4J241 112 aa7.67□□□□□ -1.18
CTTN-208ENST00000498223 TRAV8-4A0A0B4J246 113 aa7.67□□□□□ -1.18
CTTN-208ENST00000498223 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.67□□□□□ -1.18
CTTN-208ENST00000498223 TIMM17AQ99595 171 aa7.67□□□□□ -1.18
CTTN-208ENST00000498223 C2orf88Q9BSF0 95 aa7.67□□□□□ -1.18
CTTN-208ENST00000498223 COX11Q9Y6N1 276 aa7.67□□□□□ -1.18
CTTN-208ENST00000498223 LINC00959A0A1B0GUT2 108 aa7.66□□□□□ -1.18
CTTN-208ENST00000498223 IGIPA6NJ69 53 aa7.66□□□□□ -1.18
CTTN-208ENST00000498223 ATP5LO75964 103 aa7.66□□□□□ -1.18
CTTN-208ENST00000498223 HECTD4Q9Y4D8 3996 aa7.66□□□□□ -1.18
CTTN-208ENST00000498223 A0A096LNJ9 63 aa7.65□□□□□ -1.18
CTTN-208ENST00000498223 NUPR1O60356 82 aa7.65□□□□□ -1.18
CTTN-208ENST00000498223 NPSP0C0P6 89 aa7.65□□□□□ -1.18
CTTN-208ENST00000498223 XCL1P47992 114 aa7.65□□□□□ -1.18
CTTN-208ENST00000498223 ZC2HC1BQ5TFG8 222 aa7.65□□□□□ -1.18
CTTN-208ENST00000498223 CHCHD10Q8WYQ3 142 aaPredicted RBP7.65□□□□□ -1.18
CTTN-208ENST00000498223 DNAH6Q9C0G6 4158 aa7.65□□□□□ -1.19
CTTN-208ENST00000498223 GAGE12HA6NDE8 117 aa7.64□□□□□ -1.19
CTTN-208ENST00000498223 CCL25O15444 150 aa7.64□□□□□ -1.19
CTTN-208ENST00000498223 S100A6P06703 90 aa7.64□□□□□ -1.19
CTTN-208ENST00000498223 PRSS1P07477 247 aa7.64□□□□□ -1.19
CTTN-208ENST00000498223 FABP4P15090 132 aa7.64□□□□□ -1.19
CTTN-208ENST00000498223 LINC00310P59036 64 aa7.64□□□□□ -1.19
CTTN-208ENST00000498223 PDZD11Q5EBL8 140 aa7.64□□□□□ -1.19
CTTN-208ENST00000498223 PRSS29PA6NIE9 313 aa7.63□□□□□ -1.19
CTTN-208ENST00000498223 EREGO14944 169 aa7.63□□□□□ -1.19
CTTN-208ENST00000498223 RTL8CO15255 209 aa7.63□□□□□ -1.19
CTTN-208ENST00000498223 LEPROTL1O95214 131 aa7.63□□□□□ -1.19
CTTN-208ENST00000498223 BAALCQ8WXS3 180 aa7.63□□□□□ -1.19
CTTN-208ENST00000498223 FAM104AQ969W3 186 aa7.63□□□□□ -1.19
CTTN-208ENST00000498223 IFI27L1Q96BM0 104 aa7.63□□□□□ -1.19
CTTN-208ENST00000498223 PMVKQ15126 192 aa7.62□□□□□ -1.19
CTTN-208ENST00000498223 Q6ZRN7 208 aaPredicted RBP7.62□□□□□ -1.19
CTTN-208ENST00000498223 LINC00336Q6ZUF6 198 aa7.62□□□□□ -1.19
CTTN-208ENST00000498223 AMELXQ99217 191 aa7.62□□□□□ -1.19
CTTN-208ENST00000498223 HSPB8Q9UJY1 196 aa7.62□□□□□ -1.19
CTTN-208ENST00000498223 H0Y8G0 127 aa7.61□□□□□ -1.19
CTTN-208ENST00000498223 LECT2O14960 151 aa7.61□□□□□ -1.19
CTTN-208ENST00000498223 TNP2Q05952 138 aa7.61□□□□□ -1.19
CTTN-208ENST00000498223 CD164L2Q6UWJ8 174 aa7.61□□□□□ -1.19
CTTN-208ENST00000498223 LINC00173Q6ZV60 143 aa7.61□□□□□ -1.19
CTTN-208ENST00000498223 CST9LQ9H4G1 147 aa7.61□□□□□ -1.19
CTTN-208ENST00000498223 GEMIN7Q9H840 131 aaKnown RBP7.61□□□□□ -1.19
CTTN-208ENST00000498223 MALP21145 153 aa7.6□□□□□ -1.19
CTTN-208ENST00000498223 UBE2D1P51668 147 aa7.6□□□□□ -1.19
CTTN-208ENST00000498223 COA6Q5JTJ3 125 aaKnown RBP7.6□□□□□ -1.19
CTTN-208ENST00000498223 HERC2O95714 4834 aa7.59□□□□□ -1.19
CTTN-208ENST00000498223 COX7A2LO14548 114 aa7.59□□□□□ -1.19
CTTN-208ENST00000498223 S100A2P29034 98 aa7.59□□□□□ -1.19
CTTN-208ENST00000498223 SEC11AP67812 179 aa7.59□□□□□ -1.19
CTTN-208ENST00000498223 FOXI1Q12951 378 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms