RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 FAM218AQ96MZ4 157 aa9.58□□□□□ -0.88
GAPVD1-220ENST00000497580 MINOS1-NBL1R4GNA1 71 aa9.58□□□□□ -0.88
GAPVD1-220ENST00000497580 VPS13CQ709C8 3753 aa9.58□□□□□ -0.88
GAPVD1-220ENST00000497580 ZANQ9Y493 2812 aa9.58□□□□□ -0.88
GAPVD1-220ENST00000497580 CSMD2Q7Z408 3487 aa9.58□□□□□ -0.88
GAPVD1-220ENST00000497580 F5H768 121 aa9.57□□□□□ -0.88
GAPVD1-220ENST00000497580 PIK3CD-AS1Q5SR53 167 aa9.57□□□□□ -0.88
GAPVD1-220ENST00000497580 C2orf48Q96LS8 159 aa9.57□□□□□ -0.88
GAPVD1-220ENST00000497580 TRAV25A0A0B4J276 109 aa9.57□□□□□ -0.88
GAPVD1-220ENST00000497580 KLLNB2CW77 178 aa9.57□□□□□ -0.88
GAPVD1-220ENST00000497580 C10orf105Q8TEF2 133 aa9.57□□□□□ -0.88
GAPVD1-220ENST00000497580 ITPR1Q14643 2758 aa9.57□□□□□ -0.88
GAPVD1-220ENST00000497580 PIEZO1Q92508 2521 aa9.57□□□□□ -0.88
GAPVD1-220ENST00000497580 PRIMA1Q86XR5 153 aa9.57□□□□□ -0.88
GAPVD1-220ENST00000497580 TINCRA0A1B0GVN0 87 aa9.56□□□□□ -0.88
GAPVD1-220ENST00000497580 ATP5G1P05496 136 aa9.56□□□□□ -0.88
GAPVD1-220ENST00000497580 CRYGAP11844 174 aa9.56□□□□□ -0.88
GAPVD1-220ENST00000497580 BPESC1Q9GZL8 116 aa9.56□□□□□ -0.88
GAPVD1-220ENST00000497580 ABCA2Q9BZC7 2435 aa9.56□□□□□ -0.88
GAPVD1-220ENST00000497580 INAFM2P0DMQ5 153 aa9.56□□□□□ -0.88
GAPVD1-220ENST00000497580 FAM19A4Q96LR4 140 aa9.56□□□□□ -0.88
GAPVD1-220ENST00000497580 IGHV1OR15-1A0A075B7D0 117 aa9.56□□□□□ -0.88
GAPVD1-220ENST00000497580 NDUFA4O00483 81 aa9.56□□□□□ -0.88
GAPVD1-220ENST00000497580 DPH3Q96FX2 82 aa9.56□□□□□ -0.88
GAPVD1-220ENST00000497580 EPG5Q9HCE0 2579 aa9.56□□□□□ -0.88
GAPVD1-220ENST00000497580 RPL18AQ02543 176 aaKnown RBP9.55□□□□□ -0.88
GAPVD1-220ENST00000497580 FLNCQ14315 2725 aa9.55□□□□□ -0.88
GAPVD1-220ENST00000497580 C5orf38Q86SI9 138 aa9.55□□□□□ -0.88
GAPVD1-220ENST00000497580 SOSTDC1Q6X4U4 206 aa9.55□□□□□ -0.88
GAPVD1-220ENST00000497580 LINC00467Q9BRT7 94 aa9.55□□□□□ -0.88
GAPVD1-220ENST00000497580 FN1P02751 2386 aaKnown RBP9.55□□□□□ -0.88
GAPVD1-220ENST00000497580 UTP20O75691 2785 aaKnown RBP9.54□□□□□ -0.88
GAPVD1-220ENST00000497580 OXTP01178 125 aa9.54□□□□□ -0.88
GAPVD1-220ENST00000497580 C5orf56Q8N8D9 126 aa9.54□□□□□ -0.88
GAPVD1-220ENST00000497580 CELSR2Q9HCU4 2923 aa9.54□□□□□ -0.88
GAPVD1-220ENST00000497580 C9orf85Q96MD7 179 aa9.54□□□□□ -0.88
GAPVD1-220ENST00000497580 MALP21145 153 aa9.53□□□□□ -0.88
GAPVD1-220ENST00000497580 CXCL5P42830 114 aa9.53□□□□□ -0.88
GAPVD1-220ENST00000497580 MTORP42345 2549 aa9.53□□□□□ -0.88
GAPVD1-220ENST00000497580 IGHG2P01859 326 aa9.53□□□□□ -0.88
GAPVD1-220ENST00000497580 C9orf129Q5T035 196 aaKnown RBP9.53□□□□□ -0.88
GAPVD1-220ENST00000497580 WFDC9Q8NEX5 89 aa9.53□□□□□ -0.88
GAPVD1-220ENST00000497580 FAM104AQ969W3 186 aa9.53□□□□□ -0.88
GAPVD1-220ENST00000497580 FAM223BA6NKX1 122 aa9.53□□□□□ -0.88
GAPVD1-220ENST00000497580 FAM223AQ8IWN6 122 aa9.53□□□□□ -0.88
GAPVD1-220ENST00000497580 NOTCH2Q04721 2471 aa9.52□□□□□ -0.88
GAPVD1-220ENST00000497580 COX6A2Q02221 97 aa9.52□□□□□ -0.89
GAPVD1-220ENST00000497580 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.52□□□□□ -0.89
GAPVD1-220ENST00000497580 APRG1Q8IVJ8 170 aa9.52□□□□□ -0.89
GAPVD1-220ENST00000497580 USP17L23D6RBM5 183 aa9.52□□□□□ -0.89
GAPVD1-220ENST00000497580 SERP2Q8N6R1 65 aa9.52□□□□□ -0.89
GAPVD1-220ENST00000497580 TMEM258P61165 79 aa9.51□□□□□ -0.89
GAPVD1-220ENST00000497580 IGKV3OR2-268A0A0C4DH90 116 aa9.51□□□□□ -0.89
GAPVD1-220ENST00000497580 NDUFA1O15239 70 aa9.51□□□□□ -0.89
GAPVD1-220ENST00000497580 SIRPDQ9H106 197 aa9.51□□□□□ -0.89
GAPVD1-220ENST00000497580 LINC00846Q9NV44 126 aa9.51□□□□□ -0.89
GAPVD1-220ENST00000497580 TOMM7Q9P0U1 55 aa9.51□□□□□ -0.89
GAPVD1-220ENST00000497580 SLPIP03973 132 aa9.51□□□□□ -0.89
GAPVD1-220ENST00000497580 UBE2D4Q9Y2X8 147 aa9.51□□□□□ -0.89
GAPVD1-220ENST00000497580 NCR3O14931 201 aa9.5□□□□□ -0.89
GAPVD1-220ENST00000497580 A0A1W2PPR1 153 aa9.5□□□□□ -0.89
GAPVD1-220ENST00000497580 CRPP02741 224 aa9.5□□□□□ -0.89
GAPVD1-220ENST00000497580 HILS1P60008 231 aa9.5□□□□□ -0.89
GAPVD1-220ENST00000497580 MOB4Q9Y3A3 225 aa9.5□□□□□ -0.89
GAPVD1-220ENST00000497580 PYGO1Q9Y3Y4 419 aa9.5□□□□□ -0.89
GAPVD1-220ENST00000497580 RPS28P62857 69 aaKnown RBP9.49□□□□□ -0.89
GAPVD1-220ENST00000497580 BLCAPP62952 87 aa9.49□□□□□ -0.89
GAPVD1-220ENST00000497580 Q6ZSN1 163 aa9.49□□□□□ -0.89
GAPVD1-220ENST00000497580 HIST2H2BDQ6DRA6 164 aa9.49□□□□□ -0.89
GAPVD1-220ENST00000497580 TRAV23DV6A0A075B6W5 121 aa9.48□□□□□ -0.89
GAPVD1-220ENST00000497580 RNASE1P07998 156 aaKnown RBP9.48□□□□□ -0.89
GAPVD1-220ENST00000497580 SNRPD3P62318 126 aaKnown RBP9.48□□□□□ -0.89
GAPVD1-220ENST00000497580 A0A087WYN8 130 aa9.48□□□□□ -0.89
GAPVD1-220ENST00000497580 C22orf24Q9Y442 160 aa9.48□□□□□ -0.89
GAPVD1-220ENST00000497580 CHCHD7Q9BUK0 85 aa9.48□□□□□ -0.89
GAPVD1-220ENST00000497580 TIMM17BO60830 172 aa9.47□□□□□ -0.89
GAPVD1-220ENST00000497580 PKD1L2Q7Z442 2459 aa9.47□□□□□ -0.89
GAPVD1-220ENST00000497580 H3BUX3 64 aa9.47□□□□□ -0.89
GAPVD1-220ENST00000497580 LECT2O14960 151 aa9.46□□□□□ -0.89
GAPVD1-220ENST00000497580 BEAN1Q3B7T3 259 aa9.46□□□□□ -0.89
GAPVD1-220ENST00000497580 C20orf197Q8N268 126 aa9.46□□□□□ -0.89
GAPVD1-220ENST00000497580 GHRHP01286 108 aa9.46□□□□□ -0.9
GAPVD1-220ENST00000497580 LINC01561Q8N1V8 128 aa9.46□□□□□ -0.9
GAPVD1-220ENST00000497580 MAPK1IP1LQ8NDC0 245 aa9.46□□□□□ -0.9
GAPVD1-220ENST00000497580 ADORA2A-AS1P86434 159 aa9.45□□□□□ -0.9
GAPVD1-220ENST00000497580 FHL2Q14192 279 aa9.45□□□□□ -0.9
GAPVD1-220ENST00000497580 KHDC1LQ5JSQ8 128 aa9.45□□□□□ -0.9
GAPVD1-220ENST00000497580 HIST2H2BCQ6DN03 193 aa9.45□□□□□ -0.9
GAPVD1-220ENST00000497580 COPS9Q8WXC6 57 aa9.44□□□□□ -0.9
GAPVD1-220ENST00000497580 TMEM243Q9BU79 118 aa9.44□□□□□ -0.9
GAPVD1-220ENST00000497580 IGHV3OR16-12A0A075B7B8 117 aa9.44□□□□□ -0.9
GAPVD1-220ENST00000497580 LINC00158P58513 81 aa9.44□□□□□ -0.9
GAPVD1-220ENST00000497580 C1orf43Q9BWL3 253 aa9.44□□□□□ -0.9
GAPVD1-220ENST00000497580 C19orf54Q5BKX5 351 aa9.44□□□□□ -0.9
GAPVD1-220ENST00000497580 IGF2-ASQ6U949 168 aa9.44□□□□□ -0.9
GAPVD1-220ENST00000497580 IGHV4-38-2P0DP08 117 aa9.43□□□□□ -0.9
GAPVD1-220ENST00000497580 C10orf99Q6UWK7 81 aa9.43□□□□□ -0.9
GAPVD1-220ENST00000497580 MIR7-3HGQ8N6C7 128 aa9.43□□□□□ -0.9
GAPVD1-220ENST00000497580 ACANP16112 2415 aa9.43□□□□□ -0.9
GAPVD1-220ENST00000497580 HIVEP2P31629 2446 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms