RNA–Protein interactions for RNA: ENST00000497448.1

TOM1-217, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-217ENST00000497448 SNRPEP62304 92 aaKnown RBP6.68□□□□□ -1.34
TOM1-217ENST00000497448 SLC25A29Q8N8R3 303 aa6.68□□□□□ -1.34
TOM1-217ENST00000497448 RMI2Q96E14 147 aa6.68□□□□□ -1.34
TOM1-217ENST00000497448 PRELID3AQ96N28 172 aa6.68□□□□□ -1.34
TOM1-217ENST00000497448 GTSF1LQ9H1H1 148 aa6.68□□□□□ -1.34
TOM1-217ENST00000497448 LOC389332A0A1B0GUA5 103 aa6.67□□□□□ -1.34
TOM1-217ENST00000497448 IFITM10A6NMD0 228 aa6.67□□□□□ -1.34
TOM1-217ENST00000497448 F5H697 171 aa6.67□□□□□ -1.34
TOM1-217ENST00000497448 RHOHQ15669 191 aa6.67□□□□□ -1.34
TOM1-217ENST00000497448 SMIM15Q7Z3B0 74 aa6.67□□□□□ -1.34
TOM1-217ENST00000497448 LOC105371267A0A1B0GV96 52 aa6.66□□□□□ -1.34
TOM1-217ENST00000497448 C5orf52A6NGY3 159 aa6.66□□□□□ -1.34
TOM1-217ENST00000497448 A8MWV9 139 aa6.66□□□□□ -1.34
TOM1-217ENST00000497448 M0QY20 66 aa6.66□□□□□ -1.34
TOM1-217ENST00000497448 SERF1AO75920 110 aa6.66□□□□□ -1.34
TOM1-217ENST00000497448 TNFRSF6BO95407 300 aa6.66□□□□□ -1.34
TOM1-217ENST00000497448 SMIM17P0DL12 118 aa6.66□□□□□ -1.34
TOM1-217ENST00000497448 Q0VG73 95 aa6.66□□□□□ -1.34
TOM1-217ENST00000497448 ZNF56Q15929 161 aa6.66□□□□□ -1.34
TOM1-217ENST00000497448 PDZD11Q5EBL8 140 aa6.66□□□□□ -1.34
TOM1-217ENST00000497448 NIT1Q86X76 327 aa6.66□□□□□ -1.34
TOM1-217ENST00000497448 ORMDL3Q8N138 153 aa6.66□□□□□ -1.34
TOM1-217ENST00000497448 PRADC1Q9BSG0 188 aa6.66□□□□□ -1.34
TOM1-217ENST00000497448 IFI27P40305 119 aaPredicted RBP6.65□□□□□ -1.34
TOM1-217ENST00000497448 C14orf177Q52M58 125 aa6.65□□□□□ -1.34
TOM1-217ENST00000497448 COA6Q5JTJ3 125 aaKnown RBP6.65□□□□□ -1.34
TOM1-217ENST00000497448 PIK3CD-AS1Q5SR53 167 aa6.65□□□□□ -1.34
TOM1-217ENST00000497448 MRAP2Q96G30 205 aa6.65□□□□□ -1.34
TOM1-217ENST00000497448 A0A0J9YXV3 536 aa6.64□□□□□ -1.35
TOM1-217ENST00000497448 TRBV6-4A0A1B0GX49 114 aa6.64□□□□□ -1.35
TOM1-217ENST00000497448 PMCHL1Q16048 86 aa6.64□□□□□ -1.35
TOM1-217ENST00000497448 RNASEKQ6P5S7 137 aaKnown RBP6.64□□□□□ -1.35
TOM1-217ENST00000497448 BAGE3Q86Y29 109 aa6.64□□□□□ -1.35
TOM1-217ENST00000497448 HIST3H2BBQ8N257 126 aa6.64□□□□□ -1.35
TOM1-217ENST00000497448 FAM19A2Q8N3H0 131 aa6.63□□□□□ -1.35
TOM1-217ENST00000497448 PPBPP02775 128 aa6.62□□□□□ -1.35
TOM1-217ENST00000497448 S100A6P06703 90 aa6.62□□□□□ -1.35
TOM1-217ENST00000497448 LINC00694P0DN24 101 aa6.62□□□□□ -1.35
TOM1-217ENST00000497448 KRTAP10-8P60410 259 aa6.62□□□□□ -1.35
TOM1-217ENST00000497448 C9orf163Q8N9P6 203 aa6.62□□□□□ -1.35
TOM1-217ENST00000497448 NEXN-AS1Q8NBZ9 246 aa6.62□□□□□ -1.35
TOM1-217ENST00000497448 UBE2WQ96B02 151 aa6.62□□□□□ -1.35
TOM1-217ENST00000497448 MAP1LC3AQ9H492 121 aa6.62□□□□□ -1.35
TOM1-217ENST00000497448 KLK12Q9UKR0 248 aa6.62□□□□□ -1.35
TOM1-217ENST00000497448 A0A0U1RQV1 116 aa6.61□□□□□ -1.35
TOM1-217ENST00000497448 PRSS47A8MTI9 375 aa6.61□□□□□ -1.35
TOM1-217ENST00000497448 RHODO00212 210 aa6.61□□□□□ -1.35
TOM1-217ENST00000497448 TCAPO15273 167 aa6.61□□□□□ -1.35
TOM1-217ENST00000497448 POLR2KP53803 58 aaKnown RBP6.61□□□□□ -1.35
TOM1-217ENST00000497448 SUMO2P61956 95 aaKnown RBP6.61□□□□□ -1.35
TOM1-217ENST00000497448 CIRBPQ14011 172 aaKnown RBP6.61□□□□□ -1.35
TOM1-217ENST00000497448 LCE2AQ5TA79 106 aaPredicted RBP6.61□□□□□ -1.35
TOM1-217ENST00000497448 ZFP2Q6ZN57 461 aa6.61□□□□□ -1.35
TOM1-217ENST00000497448 LINC00173Q6ZV60 143 aa6.61□□□□□ -1.35
TOM1-217ENST00000497448 Q8N8P6 123 aa6.61□□□□□ -1.35
TOM1-217ENST00000497448 PRSS3P2Q8NHM4 247 aa6.61□□□□□ -1.35
TOM1-217ENST00000497448 SMIM2Q9BVW6 85 aa6.61□□□□□ -1.35
TOM1-217ENST00000497448 A0A096LNJ9 63 aa6.6□□□□□ -1.35
TOM1-217ENST00000497448 TRBV6-5A0A0K0K1A5 114 aa6.6□□□□□ -1.35
TOM1-217ENST00000497448 USP17L23D6RBM5 183 aa6.6□□□□□ -1.35
TOM1-217ENST00000497448 LINC00614P0C842 121 aa6.6□□□□□ -1.35
TOM1-217ENST00000497448 ESDP10768 282 aa6.6□□□□□ -1.35
TOM1-217ENST00000497448 PMCHP20382 165 aa6.6□□□□□ -1.35
TOM1-217ENST00000497448 HIST1H2BLQ99880 126 aa6.6□□□□□ -1.35
TOM1-217ENST00000497448 ST20Q9HBF5 79 aa6.6□□□□□ -1.35
TOM1-217ENST00000497448 NIT2Q9NQR4 276 aa6.6□□□□□ -1.35
TOM1-217ENST00000497448 LAMTOR2Q9Y2Q5 125 aa6.6□□□□□ -1.35
TOM1-217ENST00000497448 IGHV1-24A0A0C4DH33 117 aa6.59□□□□□ -1.35
TOM1-217ENST00000497448 GAGE12JA6NER3 117 aa6.59□□□□□ -1.35
TOM1-217ENST00000497448 SDHAF1A6NFY7 115 aa6.59□□□□□ -1.35
TOM1-217ENST00000497448 LINC01546A6NGU7 62 aa6.59□□□□□ -1.35
TOM1-217ENST00000497448 PRSS1P07477 247 aa6.59□□□□□ -1.35
TOM1-217ENST00000497448 GAGE1Q13065 139 aa6.59□□□□□ -1.35
TOM1-217ENST00000497448 GAGE4Q13068 117 aa6.59□□□□□ -1.35
TOM1-217ENST00000497448 GAGE5Q13069 117 aa6.59□□□□□ -1.35
TOM1-217ENST00000497448 GAGE13Q4V321 117 aa6.59□□□□□ -1.35
TOM1-217ENST00000497448 SDIM1Q6ZPB5 146 aa6.59□□□□□ -1.35
TOM1-217ENST00000497448 FA2HQ7L5A8 372 aa6.59□□□□□ -1.35
TOM1-217ENST00000497448 C20orf78Q9BR46 151 aa6.59□□□□□ -1.35
TOM1-217ENST00000497448 CIDEAO60543 219 aa6.58□□□□□ -1.36
TOM1-217ENST00000497448 TSHBP01222 138 aa6.58□□□□□ -1.36
TOM1-217ENST00000497448 FABP4P15090 132 aa6.58□□□□□ -1.36
TOM1-217ENST00000497448 DGAT2L7PQ6IED9 249 aa6.58□□□□□ -1.36
TOM1-217ENST00000497448 C1orf43Q9BWL3 253 aa6.58□□□□□ -1.36
TOM1-217ENST00000497448 A0A087WYN8 130 aa6.57□□□□□ -1.36
TOM1-217ENST00000497448 AMTP48728 403 aa6.57□□□□□ -1.36
TOM1-217ENST00000497448 RPL32P62910 135 aaKnown RBP6.57□□□□□ -1.36
TOM1-217ENST00000497448 CHCHD1Q96BP2 118 aaKnown RBP6.57□□□□□ -1.36
TOM1-217ENST00000497448 NXT2Q9NPJ8 142 aaKnown RBP6.57□□□□□ -1.36
TOM1-217ENST00000497448 TRBV27A0A0K0K1C4 114 aa6.56□□□□□ -1.36
TOM1-217ENST00000497448 H7C1H1 209 aa6.56□□□□□ -1.36
TOM1-217ENST00000497448 VCYO14598 125 aa6.56□□□□□ -1.36
TOM1-217ENST00000497448 HSBP1O75506 76 aa6.56□□□□□ -1.36
TOM1-217ENST00000497448 CHTF8P0CG12 524 aa6.56□□□□□ -1.36
TOM1-217ENST00000497448 UBE2D3P61077 147 aa6.56□□□□□ -1.36
TOM1-217ENST00000497448 UBE2D2P62837 147 aa6.56□□□□□ -1.36
TOM1-217ENST00000497448 PRR3P79522 188 aaKnown RBP6.56□□□□□ -1.36
TOM1-217ENST00000497448 OR10D4PQ8NGN7 298 aa6.56□□□□□ -1.36
TOM1-217ENST00000497448 CHCHD7Q9BUK0 85 aa6.56□□□□□ -1.36
TOM1-217ENST00000497448 AP5S1Q9NUS5 200 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms