RNA–Protein interactions for RNA: ENST00000497055.1

SGIP1-214, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 2

Gene SGIP1, Length 402 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-214ENST00000497055 SP6Q3SY56 376 aa2.42□□□□□ -2.02
SGIP1-214ENST00000497055 LCE3EQ5T5B0 92 aa2.42□□□□□ -2.02
SGIP1-214ENST00000497055 FAM104BQ5XKR9 115 aa2.42□□□□□ -2.02
SGIP1-214ENST00000497055 PRSS54Q6PEW0 395 aa2.42□□□□□ -2.02
SGIP1-214ENST00000497055 ENHOQ6UWT2 76 aa2.42□□□□□ -2.02
SGIP1-214ENST00000497055 RAB2BQ8WUD1 216 aa2.42□□□□□ -2.02
SGIP1-214ENST00000497055 PRADC1Q9BSG0 188 aa2.42□□□□□ -2.02
SGIP1-214ENST00000497055 MAP1LC3BQ9GZQ8 125 aa2.42□□□□□ -2.02
SGIP1-214ENST00000497055 GABARAPL1Q9H0R8 117 aa2.42□□□□□ -2.02
SGIP1-214ENST00000497055 SH3BGRL3Q9H299 93 aa2.42□□□□□ -2.02
SGIP1-214ENST00000497055 SPANXA1Q9NS26 97 aa2.42□□□□□ -2.02
SGIP1-214ENST00000497055 LYRM2Q9NU23 88 aaPredicted RBP2.42□□□□□ -2.02
SGIP1-214ENST00000497055 TRAV4A0A0B4J268 109 aa2.41□□□□□ -2.02
SGIP1-214ENST00000497055 A0A1B0GVG6 124 aa2.41□□□□□ -2.02
SGIP1-214ENST00000497055 ZNF861PO60384 105 aa2.41□□□□□ -2.02
SGIP1-214ENST00000497055 FAM107AO95990 144 aa2.41□□□□□ -2.02
SGIP1-214ENST00000497055 RNASE2P10153 161 aaKnown RBP2.41□□□□□ -2.02
SGIP1-214ENST00000497055 LGALS3P17931 250 aaKnown RBP2.41□□□□□ -2.02
SGIP1-214ENST00000497055 ATP6V0CP27449 155 aa2.41□□□□□ -2.02
SGIP1-214ENST00000497055 AKR1C2P52895 323 aa2.41□□□□□ -2.02
SGIP1-214ENST00000497055 TAS2R45P59539 299 aa2.41□□□□□ -2.02
SGIP1-214ENST00000497055 FLI1Q01543 452 aaPredicted RBP2.41□□□□□ -2.02
SGIP1-214ENST00000497055 WHAMMP3Q1A5X7 153 aa2.41□□□□□ -2.02
SGIP1-214ENST00000497055 AADACL3Q5VUY0 350 aa2.41□□□□□ -2.02
SGIP1-214ENST00000497055 MIR7-3HGQ8N6C7 128 aa2.41□□□□□ -2.02
SGIP1-214ENST00000497055 ZNF431Q8TF32 576 aaPredicted RBP2.41□□□□□ -2.02
SGIP1-214ENST00000497055 BORCS5Q969J3 196 aa2.41□□□□□ -2.02
SGIP1-214ENST00000497055 LPAR5Q9H1C0 372 aa2.41□□□□□ -2.02
SGIP1-214ENST00000497055 LINC00474Q9P2X8 69 aa2.41□□□□□ -2.02
SGIP1-214ENST00000497055 TMEM56-RWDD3S4R434 201 aa2.41□□□□□ -2.02
SGIP1-214ENST00000497055 TRBV20OR9-2A0A075B6H5 130 aa2.4□□□□□ -2.03
SGIP1-214ENST00000497055 IGLV10-54A0A075B6I4 117 aa2.4□□□□□ -2.03
SGIP1-214ENST00000497055 A0A0G2JND7 137 aa2.4□□□□□ -2.03
SGIP1-214ENST00000497055 PNMA8CA0A1B0GUJ8 204 aa2.4□□□□□ -2.03
SGIP1-214ENST00000497055 C7orf71A4D174 169 aa2.4□□□□□ -2.03
SGIP1-214ENST00000497055 A6NED7 52 aa2.4□□□□□ -2.03
SGIP1-214ENST00000497055 LST1O00453 97 aa2.4□□□□□ -2.03
SGIP1-214ENST00000497055 MT2AP02795 61 aa2.4□□□□□ -2.03
SGIP1-214ENST00000497055 SMIM17P0DL12 118 aa2.4□□□□□ -2.03
SGIP1-214ENST00000497055 NTF3P20783 257 aa2.4□□□□□ -2.03
SGIP1-214ENST00000497055 KRTAP5-9P26371 169 aa2.4□□□□□ -2.03
SGIP1-214ENST00000497055 LPAR6P43657 344 aa2.4□□□□□ -2.03
SGIP1-214ENST00000497055 RHEBQ15382 184 aa2.4□□□□□ -2.03
SGIP1-214ENST00000497055 RHOHQ15669 191 aa2.4□□□□□ -2.03
SGIP1-214ENST00000497055 TMEM128Q5BJH2 165 aa2.4□□□□□ -2.03
SGIP1-214ENST00000497055 Q6ZS49 121 aa2.4□□□□□ -2.03
SGIP1-214ENST00000497055 ACBD7Q8N6N7 88 aa2.4□□□□□ -2.03
SGIP1-214ENST00000497055 LINC00304Q8N9R0 145 aa2.4□□□□□ -2.03
SGIP1-214ENST00000497055 TSC22D3Q99576 134 aa2.4□□□□□ -2.03
SGIP1-214ENST00000497055 SLC50A1Q9BRV3 221 aa2.4□□□□□ -2.03
SGIP1-214ENST00000497055 NKX6-2Q9C056 277 aaPredicted RBP2.4□□□□□ -2.03
SGIP1-214ENST00000497055 PHLDA3Q9Y5J5 127 aa2.4□□□□□ -2.03
SGIP1-214ENST00000497055 A0A087WWC5 75 aa2.39□□□□□ -2.03
SGIP1-214ENST00000497055 IGSF23A1L1A6 192 aa2.39□□□□□ -2.03
SGIP1-214ENST00000497055 A8MUN3 132 aa2.39□□□□□ -2.03
SGIP1-214ENST00000497055 J3QRE1 110 aa2.39□□□□□ -2.03
SGIP1-214ENST00000497055 UBE2L6O14933 153 aa2.39□□□□□ -2.03
SGIP1-214ENST00000497055 ARPC5O15511 151 aa2.39□□□□□ -2.03
SGIP1-214ENST00000497055 SLC25A4P12235 298 aa2.39□□□□□ -2.03
SGIP1-214ENST00000497055 RNASE4P34096 147 aaKnown RBP2.39□□□□□ -2.03
SGIP1-214ENST00000497055 DEFA3P59666 94 aa2.39□□□□□ -2.03
SGIP1-214ENST00000497055 ZNF90Q03938 601 aa2.39□□□□□ -2.03
SGIP1-214ENST00000497055 SURF2Q15527 256 aaPredicted RBP2.39□□□□□ -2.03
SGIP1-214ENST00000497055 PCOTHQ58A44 107 aa2.39□□□□□ -2.03
SGIP1-214ENST00000497055 TMEM78Q5T7P6 136 aa2.39□□□□□ -2.03
SGIP1-214ENST00000497055 C12orf73Q69YU5 71 aa2.39□□□□□ -2.03
SGIP1-214ENST00000497055 XAF1Q6GPH4 301 aa2.39□□□□□ -2.03
SGIP1-214ENST00000497055 OR13C8Q8NGS7 320 aa2.39□□□□□ -2.03
SGIP1-214ENST00000497055 WDR61Q9GZS3 305 aaKnown RBP2.39□□□□□ -2.03
SGIP1-214ENST00000497055 TRAPPC1Q9Y5R8 145 aa2.39□□□□□ -2.03
SGIP1-214ENST00000497055 TRAV9-1A0A075B6T8 112 aa2.38□□□□□ -2.03
SGIP1-214ENST00000497055 IGHV3-73A0A0B4J1V6 119 aa2.38□□□□□ -2.03
SGIP1-214ENST00000497055 TMEM262E9PQX1 116 aa2.38□□□□□ -2.03
SGIP1-214ENST00000497055 GNGT2O14610 69 aa2.38□□□□□ -2.03
SGIP1-214ENST00000497055 ANGP03950 147 aaKnown RBP2.38□□□□□ -2.03
SGIP1-214ENST00000497055 MT1FP04733 61 aa2.38□□□□□ -2.03
SGIP1-214ENST00000497055 SLC25A5P05141 298 aaKnown RBP2.38□□□□□ -2.03
SGIP1-214ENST00000497055 SRP19P09132 144 aaKnown RBP2.38□□□□□ -2.03
SGIP1-214ENST00000497055 KRTAP12-2P59991 146 aa2.38□□□□□ -2.03
SGIP1-214ENST00000497055 QRFPP83859 136 aa2.38□□□□□ -2.03
SGIP1-214ENST00000497055 MIAQ16674 131 aa2.38□□□□□ -2.03
SGIP1-214ENST00000497055 KRTAP26-1Q6PEX3 210 aa2.38□□□□□ -2.03
SGIP1-214ENST00000497055 CLPSL2Q6UWE3 100 aa2.38□□□□□ -2.03
SGIP1-214ENST00000497055 FP248Q71RG6 208 aaPredicted RBP2.38□□□□□ -2.03
SGIP1-214ENST00000497055 PHF5AQ7RTV0 110 aaKnown RBP2.38□□□□□ -2.03
SGIP1-214ENST00000497055 MBD3L1Q8WWY6 194 aa2.38□□□□□ -2.03
SGIP1-214ENST00000497055 HIST1H2BAQ96A08 127 aa2.38□□□□□ -2.03
SGIP1-214ENST00000497055 CCDC32Q9BV29 185 aa2.38□□□□□ -2.03
SGIP1-214ENST00000497055 SAR1AQ9NR31 198 aa2.38□□□□□ -2.03
SGIP1-214ENST00000497055 GSKIPQ9P0R6 139 aa2.38□□□□□ -2.03
SGIP1-214ENST00000497055 IGLV4-69A0A075B6H9 119 aa2.37□□□□□ -2.03
SGIP1-214ENST00000497055 A0A1B0GW54 56 aa2.37□□□□□ -2.03
SGIP1-214ENST00000497055 A0A1W2PRE2 83 aa2.37□□□□□ -2.03
SGIP1-214ENST00000497055 SLC17A3O00476 420 aa2.37□□□□□ -2.03
SGIP1-214ENST00000497055 PLA2G10O15496 165 aa2.37□□□□□ -2.03
SGIP1-214ENST00000497055 PPBPP02775 128 aa2.37□□□□□ -2.03
SGIP1-214ENST00000497055 FXYD4P59646 89 aa2.37□□□□□ -2.03
SGIP1-214ENST00000497055 KRTAP10-10P60014 251 aa2.37□□□□□ -2.03
SGIP1-214ENST00000497055 SCGB2B2Q4G0G5 96 aa2.37□□□□□ -2.03
SGIP1-214ENST00000497055 CCDC58Q4VC31 144 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms