RNA–Protein interactions for RNA: ENST00000497026.5

CSMD3-208, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 1,406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-208ENST00000497026 LEPP41159 167 aa3.61□□□□□ -1.83
CSMD3-208ENST00000497026 RPS28P62857 69 aaKnown RBP3.61□□□□□ -1.83
CSMD3-208ENST00000497026 ATXN8Q156A1 80 aa3.61□□□□□ -1.83
CSMD3-208ENST00000497026 CLEC19AQ6UXS0 136 aa3.61□□□□□ -1.83
CSMD3-208ENST00000497026 SCGB1D4Q6XE38 83 aa3.61□□□□□ -1.83
CSMD3-208ENST00000497026 LINC00305Q7Z4B0 112 aa3.61□□□□□ -1.83
CSMD3-208ENST00000497026 PRNTQ86SH4 94 aa3.61□□□□□ -1.83
CSMD3-208ENST00000497026 LINC01587Q99440 93 aa3.61□□□□□ -1.83
CSMD3-208ENST00000497026 TRGV9Q99603 122 aa3.61□□□□□ -1.83
CSMD3-208ENST00000497026 B9D2Q9BPU9 175 aa3.61□□□□□ -1.83
CSMD3-208ENST00000497026 HIGD1AQ9Y241 93 aa3.61□□□□□ -1.83
CSMD3-208ENST00000497026 TMSB15BA0A087X1C1 80 aa3.61□□□□□ -1.83
CSMD3-208ENST00000497026 IGHV3-21A0A0B4J1V1 117 aa3.61□□□□□ -1.83
CSMD3-208ENST00000497026 ZNF815PA8K554 130 aa3.61□□□□□ -1.83
CSMD3-208ENST00000497026 F8VRH5 84 aa3.61□□□□□ -1.83
CSMD3-208ENST00000497026 INS-IGF2F8WCM5 200 aa3.61□□□□□ -1.83
CSMD3-208ENST00000497026 H7C1H1 209 aa3.61□□□□□ -1.83
CSMD3-208ENST00000497026 I3L2K1 104 aa3.61□□□□□ -1.83
CSMD3-208ENST00000497026 M0R2P5 195 aa3.61□□□□□ -1.83
CSMD3-208ENST00000497026 TCL1BO95988 128 aa3.61□□□□□ -1.83
CSMD3-208ENST00000497026 P0DMU3 169 aa3.61□□□□□ -1.83
CSMD3-208ENST00000497026 FAM231AP0DMU4 169 aa3.61□□□□□ -1.83
CSMD3-208ENST00000497026 FAM231CP0DMU5 169 aa3.61□□□□□ -1.83
CSMD3-208ENST00000497026 SRSF9Q13242 221 aaKnown RBP eCLIP3.61□□□□□ -1.83
CSMD3-208ENST00000497026 MRPL51Q4U2R6 128 aaKnown RBP3.61□□□□□ -1.83
CSMD3-208ENST00000497026 DEFB121Q5J5C9 76 aa3.61□□□□□ -1.83
CSMD3-208ENST00000497026 TMEM170BQ5T4T1 132 aa3.61□□□□□ -1.83
CSMD3-208ENST00000497026 UNQ9165/PRO28630Q6UXU0 137 aa3.61□□□□□ -1.83
CSMD3-208ENST00000497026 AMN1Q8IY45 258 aa3.61□□□□□ -1.83
CSMD3-208ENST00000497026 C3orf22Q8N5N4 141 aa3.61□□□□□ -1.83
CSMD3-208ENST00000497026 Q8N8P6 123 aa3.61□□□□□ -1.83
CSMD3-208ENST00000497026 EEF1AKMT3Q96AZ1 226 aa3.61□□□□□ -1.83
CSMD3-208ENST00000497026 C21orf62Q9NYP8 219 aa3.61□□□□□ -1.83
CSMD3-208ENST00000497026 TMEM14CQ9P0S9 112 aa3.61□□□□□ -1.83
CSMD3-208ENST00000497026 HHLA3Q9XRX5 114 aa3.61□□□□□ -1.83
CSMD3-208ENST00000497026 IGKV1OR2-108A0A075B7D4 117 aa3.6□□□□□ -1.83
CSMD3-208ENST00000497026 TRBV7-1A0A0A6YYK4 115 aa3.6□□□□□ -1.83
CSMD3-208ENST00000497026 IGHV3-35A0A0C4DH35 117 aa3.6□□□□□ -1.83
CSMD3-208ENST00000497026 H3BT86 120 aa3.6□□□□□ -1.83
CSMD3-208ENST00000497026 LGALS9O00182 355 aa3.6□□□□□ -1.83
CSMD3-208ENST00000497026 ACYP1P07311 99 aa3.6□□□□□ -1.83
CSMD3-208ENST00000497026 LINC00694P0DN24 101 aa3.6□□□□□ -1.83
CSMD3-208ENST00000497026 IGHV4-30-4P0DP06 118 aa3.6□□□□□ -1.83
CSMD3-208ENST00000497026 TMEM258P61165 79 aa3.6□□□□□ -1.83
CSMD3-208ENST00000497026 PMVKQ15126 192 aa3.6□□□□□ -1.83
CSMD3-208ENST00000497026 PAPPA-AS1Q5QFB9 102 aa3.6□□□□□ -1.83
CSMD3-208ENST00000497026 PVRIGQ6DKI7 326 aa3.6□□□□□ -1.83
CSMD3-208ENST00000497026 LINC00322Q6ZN03 302 aaPredicted RBP3.6□□□□□ -1.83
CSMD3-208ENST00000497026 GOLT1AQ6ZVE7 132 aa3.6□□□□□ -1.83
CSMD3-208ENST00000497026 FAM19A5Q7Z5A7 132 aaPredicted RBP3.6□□□□□ -1.83
CSMD3-208ENST00000497026 SMIM29Q86T20 159 aa3.6□□□□□ -1.83
CSMD3-208ENST00000497026 GPHB5Q86YW7 130 aa3.6□□□□□ -1.83
CSMD3-208ENST00000497026 LYPD1Q8N2G4 141 aa3.6□□□□□ -1.83
CSMD3-208ENST00000497026 ZNRF2Q8NHG8 242 aa3.6□□□□□ -1.83
CSMD3-208ENST00000497026 LINC01600Q96MT4 127 aa3.6□□□□□ -1.83
CSMD3-208ENST00000497026 MRPL35Q9NZE8 188 aaKnown RBP3.6□□□□□ -1.83
CSMD3-208ENST00000497026 MRPL36Q9P0J6 103 aaKnown RBP3.6□□□□□ -1.83
CSMD3-208ENST00000497026 PEMTQ9UBM1 199 aa3.6□□□□□ -1.83
CSMD3-208ENST00000497026 FAM236AA0A1B0GUQ0 79 aa3.59□□□□□ -1.84
CSMD3-208ENST00000497026 FAM236BA0A1B0GV22 79 aa3.59□□□□□ -1.84
CSMD3-208ENST00000497026 F5H768 121 aa3.59□□□□□ -1.84
CSMD3-208ENST00000497026 IGHV3-48P01763 117 aa3.59□□□□□ -1.84
CSMD3-208ENST00000497026 CTSGP08311 255 aa3.59□□□□□ -1.84
CSMD3-208ENST00000497026 RPL7P18124 248 aaKnown RBP3.59□□□□□ -1.84
CSMD3-208ENST00000497026 HERVK_113P63121 156 aa3.59□□□□□ -1.84
CSMD3-208ENST00000497026 Q1RN00 199 aa3.59□□□□□ -1.84
CSMD3-208ENST00000497026 DEFB114Q30KQ6 69 aa3.59□□□□□ -1.84
CSMD3-208ENST00000497026 LYZL1Q6UWQ5 148 aa3.59□□□□□ -1.84
CSMD3-208ENST00000497026 TMEM61Q8N0U2 210 aa3.59□□□□□ -1.84
CSMD3-208ENST00000497026 LINC00526Q96FQ7 95 aa3.59□□□□□ -1.84
CSMD3-208ENST00000497026 TTTY13Q9BZ97 58 aa3.59□□□□□ -1.84
CSMD3-208ENST00000497026 PRO1854Q9UHT4 67 aa3.59□□□□□ -1.84
CSMD3-208ENST00000497026 SMAD5-AS1Q9Y6J3 95 aa3.59□□□□□ -1.84
CSMD3-208ENST00000497026 IGHV3OR16-8A0A075B7F1 116 aa3.58□□□□□ -1.84
CSMD3-208ENST00000497026 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.58□□□□□ -1.84
CSMD3-208ENST00000497026 A0A0B4J2C4 111 aa3.58□□□□□ -1.84
CSMD3-208ENST00000497026 TRBV10-2A0A0K0K1G8 114 aa3.58□□□□□ -1.84
CSMD3-208ENST00000497026 A8MZ25 164 aa3.58□□□□□ -1.84
CSMD3-208ENST00000497026 F8WDY8 70 aa3.58□□□□□ -1.84
CSMD3-208ENST00000497026 K7EMI3 77 aa3.58□□□□□ -1.84
CSMD3-208ENST00000497026 ATOX1O00244 68 aa3.58□□□□□ -1.84
CSMD3-208ENST00000497026 NDUFA4O00483 81 aa3.58□□□□□ -1.84
CSMD3-208ENST00000497026 CD7P09564 240 aa3.58□□□□□ -1.84
CSMD3-208ENST00000497026 LAGE3Q14657 143 aa3.58□□□□□ -1.84
CSMD3-208ENST00000497026 LINC01620Q4KN68 170 aa3.58□□□□□ -1.84
CSMD3-208ENST00000497026 GAGE2AQ6NT46 116 aa3.58□□□□□ -1.84
CSMD3-208ENST00000497026 PATE2Q6UY27 113 aa3.58□□□□□ -1.84
CSMD3-208ENST00000497026 MAPKAPK5-AS1Q8N8E1 139 aa3.58□□□□□ -1.84
CSMD3-208ENST00000497026 KIR2DL5BQ8NHK3 375 aa3.58□□□□□ -1.84
CSMD3-208ENST00000497026 ASCL2Q99929 193 aa3.58□□□□□ -1.84
CSMD3-208ENST00000497026 WFDC10AQ9H1F0 79 aa3.58□□□□□ -1.84
CSMD3-208ENST00000497026 SH2D1AO60880 128 aa3.57□□□□□ -1.84
CSMD3-208ENST00000497026 ORM1P02763 201 aa3.57□□□□□ -1.84
CSMD3-208ENST00000497026 CXCL5P42830 114 aa3.57□□□□□ -1.84
CSMD3-208ENST00000497026 FXYD7P58549 80 aa3.57□□□□□ -1.84
CSMD3-208ENST00000497026 ZNF56Q15929 161 aa3.57□□□□□ -1.84
CSMD3-208ENST00000497026 ORMDL2Q53FV1 153 aa3.57□□□□□ -1.84
CSMD3-208ENST00000497026 Q6ZQT7 251 aa3.57□□□□□ -1.84
CSMD3-208ENST00000497026 DYNLRB2Q8TF09 96 aa3.57□□□□□ -1.84
CSMD3-208ENST00000497026 BAALCQ8WXS3 180 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms