RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 GCGP01275 180 aa2.71□□□□□ -1.98
VPS52-222ENST00000495981 GPX1P07203 203 aa2.71□□□□□ -1.98
VPS52-222ENST00000495981 RAB5AP20339 215 aa2.71□□□□□ -1.98
VPS52-222ENST00000495981 PFN2P35080 140 aa2.71□□□□□ -1.98
VPS52-222ENST00000495981 S100A10P60903 97 aa2.71□□□□□ -1.98
VPS52-222ENST00000495981 UBE2L3P68036 154 aaKnown RBP2.71□□□□□ -1.98
VPS52-222ENST00000495981 TAL2Q16559 108 aa2.71□□□□□ -1.98
VPS52-222ENST00000495981 TMEM183BQ1AE95 376 aa2.71□□□□□ -1.98
VPS52-222ENST00000495981 LGALSLQ3ZCW2 172 aaPredicted RBP2.71□□□□□ -1.98
VPS52-222ENST00000495981 AKR1C8PQ5T2L2 129 aa2.71□□□□□ -1.98
VPS52-222ENST00000495981 TMEM78Q5T7P6 136 aa2.71□□□□□ -1.98
VPS52-222ENST00000495981 EIF5AL1Q6IS14 154 aaKnown RBP2.71□□□□□ -1.98
VPS52-222ENST00000495981 FAM19A1Q7Z5A9 133 aa2.71□□□□□ -1.98
VPS52-222ENST00000495981 NIT1Q86X76 327 aa2.71□□□□□ -1.98
VPS52-222ENST00000495981 TMEM183AQ8IXX5 376 aa2.71□□□□□ -1.98
VPS52-222ENST00000495981 TVP23CQ96ET8 276 aa2.71□□□□□ -1.98
VPS52-222ENST00000495981 TXNDC17Q9BRA2 123 aa2.71□□□□□ -1.98
VPS52-222ENST00000495981 SEC11CQ9BY50 192 aa2.71□□□□□ -1.98
VPS52-222ENST00000495981 CST9LQ9H4G1 147 aa2.71□□□□□ -1.98
VPS52-222ENST00000495981 TIMM9Q9Y5J7 89 aa2.71□□□□□ -1.98
VPS52-222ENST00000495981 M0R2P5 195 aa2.7□□□□□ -1.98
VPS52-222ENST00000495981 PHOX2AO14813 284 aa2.7□□□□□ -1.98
VPS52-222ENST00000495981 LECT2O14960 151 aa2.7□□□□□ -1.98
VPS52-222ENST00000495981 MT3P25713 68 aa2.7□□□□□ -1.98
VPS52-222ENST00000495981 HBG1P69891 147 aa2.7□□□□□ -1.98
VPS52-222ENST00000495981 HBG2P69892 147 aa2.7□□□□□ -1.98
VPS52-222ENST00000495981 RHOHQ15669 191 aa2.7□□□□□ -1.98
VPS52-222ENST00000495981 DPPA3Q6W0C5 159 aa2.7□□□□□ -1.98
VPS52-222ENST00000495981 MRPL55Q7Z7F7 128 aaKnown RBP2.7□□□□□ -1.98
VPS52-222ENST00000495981 ZNF664Q8N3J9 261 aa2.7□□□□□ -1.98
VPS52-222ENST00000495981 SLC25A29Q8N8R3 303 aa2.7□□□□□ -1.98
VPS52-222ENST00000495981 HIST1H2BAQ96A08 127 aa2.7□□□□□ -1.98
VPS52-222ENST00000495981 DNAJC30Q96LL9 226 aa2.7□□□□□ -1.98
VPS52-222ENST00000495981 C2orf50Q96LR7 162 aa2.7□□□□□ -1.98
VPS52-222ENST00000495981 WDR61Q9GZS3 305 aaKnown RBP2.7□□□□□ -1.98
VPS52-222ENST00000495981 SLC25A31Q9H0C2 315 aa2.7□□□□□ -1.98
VPS52-222ENST00000495981 DAZ3Q9NR90 486 aaKnown RBP2.7□□□□□ -1.98
VPS52-222ENST00000495981 KCNIP2Q9NS61 270 aa2.7□□□□□ -1.98
VPS52-222ENST00000495981 OR5AC2Q9NZP5 309 aa2.7□□□□□ -1.98
VPS52-222ENST00000495981 LENEPQ9Y5L5 61 aa2.7□□□□□ -1.98
VPS52-222ENST00000495981 TRAV8-1A0A0A6YYK1 113 aa2.69□□□□□ -1.98
VPS52-222ENST00000495981 TRBV6-4A0A1B0GX49 114 aa2.69□□□□□ -1.98
VPS52-222ENST00000495981 HMSDA8MTL9 139 aa2.69□□□□□ -1.98
VPS52-222ENST00000495981 M0QXV9 152 aa2.69□□□□□ -1.98
VPS52-222ENST00000495981 LYRM1O43325 122 aa2.69□□□□□ -1.98
VPS52-222ENST00000495981 PSCAO43653 123 aa2.69□□□□□ -1.98
VPS52-222ENST00000495981 SSNA1O43805 119 aa2.69□□□□□ -1.98
VPS52-222ENST00000495981 PDE6DO43924 150 aa2.69□□□□□ -1.98
VPS52-222ENST00000495981 OR7C2O60412 319 aa2.69□□□□□ -1.98
VPS52-222ENST00000495981 IGHV3-30P01768 117 aa2.69□□□□□ -1.98
VPS52-222ENST00000495981 IGHV3-33P01772 117 aa2.69□□□□□ -1.98
VPS52-222ENST00000495981 GIPP09681 153 aaPredicted RBP2.69□□□□□ -1.98
VPS52-222ENST00000495981 SMIM17P0DL12 118 aa2.69□□□□□ -1.98
VPS52-222ENST00000495981 IGHV3-30-3P0DP02 117 aa2.69□□□□□ -1.98
VPS52-222ENST00000495981 IGHV3-30-5P0DP03 117 aa2.69□□□□□ -1.98
VPS52-222ENST00000495981 ZNF80P51504 273 aaPredicted RBP2.69□□□□□ -1.98
VPS52-222ENST00000495981 CKS1BP61024 79 aa2.69□□□□□ -1.98
VPS52-222ENST00000495981 GNG5P63218 68 aa2.69□□□□□ -1.98
VPS52-222ENST00000495981 KHDC3LQ587J8 217 aa2.69□□□□□ -1.98
VPS52-222ENST00000495981 CFAP126Q5VTH2 177 aa2.69□□□□□ -1.98
VPS52-222ENST00000495981 Q6ZVH6 145 aa2.69□□□□□ -1.98
VPS52-222ENST00000495981 SH2D6Q7Z4S9 175 aa2.69□□□□□ -1.98
VPS52-222ENST00000495981 TMEM75Q8N9X5 138 aa2.69□□□□□ -1.98
VPS52-222ENST00000495981 OR5C1Q8NGR4 320 aa2.69□□□□□ -1.98
VPS52-222ENST00000495981 CIRBP-AS1Q8TBR5 109 aa2.69□□□□□ -1.98
VPS52-222ENST00000495981 MRAP2Q96G30 205 aa2.69□□□□□ -1.98
VPS52-222ENST00000495981 CHAC1Q9BUX1 264 aa2.69□□□□□ -1.98
VPS52-222ENST00000495981 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.68□□□□□ -1.98
VPS52-222ENST00000495981 TRAV21A0A0B4J279 112 aa2.68□□□□□ -1.98
VPS52-222ENST00000495981 GGTLC3B5MD39 225 aa2.68□□□□□ -1.98
VPS52-222ENST00000495981 GNRH2O43555 120 aa2.68□□□□□ -1.98
VPS52-222ENST00000495981 IGLV2-8P01709 118 aa2.68□□□□□ -1.98
VPS52-222ENST00000495981 PET100P0DJ07 73 aa2.68□□□□□ -1.98
VPS52-222ENST00000495981 GZMBP10144 247 aa2.68□□□□□ -1.98
VPS52-222ENST00000495981 MGST1P10620 155 aaKnown RBP2.68□□□□□ -1.98
VPS52-222ENST00000495981 RNASE3P12724 160 aaKnown RBP2.68□□□□□ -1.98
VPS52-222ENST00000495981 H2BFSP57053 126 aa2.68□□□□□ -1.98
VPS52-222ENST00000495981 CACNG7P62955 275 aa2.68□□□□□ -1.98
VPS52-222ENST00000495981 RPL18AQ02543 176 aaKnown RBP2.68□□□□□ -1.98
VPS52-222ENST00000495981 COA6Q5JTJ3 125 aaKnown RBP2.68□□□□□ -1.98
VPS52-222ENST00000495981 GOLT1AQ6ZVE7 132 aa2.68□□□□□ -1.98
VPS52-222ENST00000495981 DAZ4Q86SG3 579 aaKnown RBP2.68□□□□□ -1.98
VPS52-222ENST00000495981 HIST3H2BBQ8N257 126 aa2.68□□□□□ -1.98
VPS52-222ENST00000495981 OR10D4PQ8NGN7 298 aa2.68□□□□□ -1.98
VPS52-222ENST00000495981 PRO1933Q9H354 126 aa2.68□□□□□ -1.98
VPS52-222ENST00000495981 OTORQ9NRC9 128 aa2.68□□□□□ -1.98
VPS52-222ENST00000495981 IGHV3-73A0A0B4J1V6 119 aa2.67□□□□□ -1.98
VPS52-222ENST00000495981 TRAV8-6A0A0B4J262 113 aa2.67□□□□□ -1.98
VPS52-222ENST00000495981 IGHV3OR16-9A0A0B4J2B5 98 aa2.67□□□□□ -1.98
VPS52-222ENST00000495981 PANO1I0J062 215 aa2.67□□□□□ -1.98
VPS52-222ENST00000495981 ARL14EPLP0DKL9 152 aa2.67□□□□□ -1.98
VPS52-222ENST00000495981 CSN1S1P47710 185 aa2.67□□□□□ -1.98
VPS52-222ENST00000495981 IQCJQ1A5X6 159 aa2.67□□□□□ -1.98
VPS52-222ENST00000495981 OR10J3Q5JRS4 329 aa2.67□□□□□ -1.98
VPS52-222ENST00000495981 LCE1FQ5T754 118 aa2.67□□□□□ -1.98
VPS52-222ENST00000495981 ATP6V0E2Q8NHE4 81 aa2.67□□□□□ -1.98
VPS52-222ENST00000495981 SIGMAR1Q99720 223 aa2.67□□□□□ -1.98
VPS52-222ENST00000495981 MIEN1Q9BRT3 115 aa2.67□□□□□ -1.98
VPS52-222ENST00000495981 PRADC1Q9BSG0 188 aa2.67□□□□□ -1.98
VPS52-222ENST00000495981 KRTAP2-2Q9BYT5 123 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms