RNA–Protein interactions for RNA: ENST00000494511.5

PMP22-206, Transcript of peripheral myelin protein 22, humanhuman

TSL 1 (best) BASIC

Gene PMP22, Length 872 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMP22-206ENST00000494511 HIGD2BQ4VC39 106 aa9.28□□□□□ -0.92
PMP22-206ENST00000494511 FAM104BQ5XKR9 115 aa9.28□□□□□ -0.92
PMP22-206ENST00000494511 MRPL54Q6P161 138 aaKnown RBP9.28□□□□□ -0.92
PMP22-206ENST00000494511 SDIM1Q6ZPB5 146 aa9.28□□□□□ -0.92
PMP22-206ENST00000494511 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.28□□□□□ -0.92
PMP22-206ENST00000494511 C7orf77A4D0Y5 90 aa9.27□□□□□ -0.93
PMP22-206ENST00000494511 XCL1P47992 114 aa9.27□□□□□ -0.93
PMP22-206ENST00000494511 SUMO2P61956 95 aaKnown RBP9.27□□□□□ -0.93
PMP22-206ENST00000494511 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.26□□□□□ -0.93
PMP22-206ENST00000494511 PPP1R17O96001 155 aa9.26□□□□□ -0.93
PMP22-206ENST00000494511 CKS2P33552 79 aa9.26□□□□□ -0.93
PMP22-206ENST00000494511 CFAP161Q6P656 301 aa9.26□□□□□ -0.93
PMP22-206ENST00000494511 IGHV3-64A0A075B6Q5 118 aa9.25□□□□□ -0.93
PMP22-206ENST00000494511 LINC00959A0A1B0GUT2 108 aa9.25□□□□□ -0.93
PMP22-206ENST00000494511 A0A1B0GW15 77 aa9.25□□□□□ -0.93
PMP22-206ENST00000494511 CCL25O15444 150 aa9.25□□□□□ -0.93
PMP22-206ENST00000494511 FOXI1Q12951 378 aa9.25□□□□□ -0.93
PMP22-206ENST00000494511 MRPL52Q86TS9 123 aaKnown RBP9.25□□□□□ -0.93
PMP22-206ENST00000494511 KIR2DL4Q99706 377 aa9.25□□□□□ -0.93
PMP22-206ENST00000494511 CDC42SE2Q9NRR3 84 aa9.25□□□□□ -0.93
PMP22-206ENST00000494511 PPP1R2P9O14990 202 aa9.24□□□□□ -0.93
PMP22-206ENST00000494511 CHTF8P0CG12 524 aa9.24□□□□□ -0.93
PMP22-206ENST00000494511 RAB14P61106 215 aa9.24□□□□□ -0.93
PMP22-206ENST00000494511 HBBP68871 147 aa9.24□□□□□ -0.93
PMP22-206ENST00000494511 ZNF664Q8N3J9 261 aa9.24□□□□□ -0.93
PMP22-206ENST00000494511 DPH3Q96FX2 82 aa9.24□□□□□ -0.93
PMP22-206ENST00000494511 A0A1B0GXF2 115 aa9.23□□□□□ -0.93
PMP22-206ENST00000494511 LINC00862A6NCI5 91 aa9.23□□□□□ -0.93
PMP22-206ENST00000494511 D6R8Y8 96 aa9.23□□□□□ -0.93
PMP22-206ENST00000494511 KRTAP10-4P60372 401 aaPredicted RBP9.23□□□□□ -0.93
PMP22-206ENST00000494511 SS18Q15532 418 aa9.23□□□□□ -0.93
PMP22-206ENST00000494511 RNASE13Q5GAN3 156 aaKnown RBP9.23□□□□□ -0.93
PMP22-206ENST00000494511 F8W036 122 aa9.22□□□□□ -0.93
PMP22-206ENST00000494511 TNFRSF6BO95407 300 aa9.22□□□□□ -0.93
PMP22-206ENST00000494511 S100A8P05109 93 aa9.22□□□□□ -0.93
PMP22-206ENST00000494511 HMCN2Q8NDA2 5059 aa9.21□□□□□ -0.94
PMP22-206ENST00000494511 GVQW2A0A096LPI5 108 aaPredicted RBP9.21□□□□□ -0.94
PMP22-206ENST00000494511 RPL37AP61513 92 aaKnown RBP9.21□□□□□ -0.94
PMP22-206ENST00000494511 LINC00526Q96FQ7 95 aa9.21□□□□□ -0.94
PMP22-206ENST00000494511 C20orf78Q9BR46 151 aa9.21□□□□□ -0.94
PMP22-206ENST00000494511 UBE2D4Q9Y2X8 147 aa9.21□□□□□ -0.94
PMP22-206ENST00000494511 TRBV24-1A0A075B6N3 115 aa9.2□□□□□ -0.94
PMP22-206ENST00000494511 J3QL48 77 aa9.2□□□□□ -0.94
PMP22-206ENST00000494511 NPYP01303 97 aa9.2□□□□□ -0.94
PMP22-206ENST00000494511 COX6A2Q02221 97 aa9.2□□□□□ -0.94
PMP22-206ENST00000494511 SMIM2Q9BVW6 85 aa9.2□□□□□ -0.94
PMP22-206ENST00000494511 TRAV13-1A0A0B4J241 112 aa9.19□□□□□ -0.94
PMP22-206ENST00000494511 IGHV1-58A0A0C4DH39 117 aa9.19□□□□□ -0.94
PMP22-206ENST00000494511 RPL39P62891 51 aaKnown RBP9.19□□□□□ -0.94
PMP22-206ENST00000494511 SMAGPQ0VAQ4 97 aa9.19□□□□□ -0.94
PMP22-206ENST00000494511 CIRBPQ14011 172 aaKnown RBP9.19□□□□□ -0.94
PMP22-206ENST00000494511 CD164L2Q6UWJ8 174 aa9.19□□□□□ -0.94
PMP22-206ENST00000494511 Q6ZUT4 128 aa9.19□□□□□ -0.94
PMP22-206ENST00000494511 PRSS3P2Q8NHM4 247 aa9.19□□□□□ -0.94
PMP22-206ENST00000494511 A0A087WYN8 130 aa9.18□□□□□ -0.94
PMP22-206ENST00000494511 IGKV2-24A0A0C4DH68 120 aa9.18□□□□□ -0.94
PMP22-206ENST00000494511 TCAPO15273 167 aa9.18□□□□□ -0.94
PMP22-206ENST00000494511 MT-ND4LP03901 98 aa9.18□□□□□ -0.94
PMP22-206ENST00000494511 RPL32P62910 135 aaKnown RBP9.18□□□□□ -0.94
PMP22-206ENST00000494511 ATP5L2Q7Z4Y8 100 aa9.18□□□□□ -0.94
PMP22-206ENST00000494511 SPACA4Q8TDM5 124 aa9.18□□□□□ -0.94
PMP22-206ENST00000494511 TMEM18Q96B42 140 aa9.18□□□□□ -0.94
PMP22-206ENST00000494511 CSDC2Q9Y534 153 aaKnown RBP9.18□□□□□ -0.94
PMP22-206ENST00000494511 UBR4Q5T4S7 5183 aa9.17□□□□□ -0.94
PMP22-206ENST00000494511 C1orf196B1AJZ1 125 aa9.17□□□□□ -0.94
PMP22-206ENST00000494511 PNRC1Q12796 327 aaPredicted RBP9.17□□□□□ -0.94
PMP22-206ENST00000494511 TMEM136Q6ZRR5 245 aa9.17□□□□□ -0.94
PMP22-206ENST00000494511 ORMDL3Q8N138 153 aa9.17□□□□□ -0.94
PMP22-206ENST00000494511 PRELID3AQ96N28 172 aa9.17□□□□□ -0.94
PMP22-206ENST00000494511 PPBPP02775 128 aa9.16□□□□□ -0.94
PMP22-206ENST00000494511 MALP21145 153 aa9.16□□□□□ -0.94
PMP22-206ENST00000494511 MAJINQ3KP22 176 aa9.16□□□□□ -0.94
PMP22-206ENST00000494511 CLLU1Q5K131 121 aa9.16□□□□□ -0.94
PMP22-206ENST00000494511 ANAPC16Q96DE5 110 aa9.16□□□□□ -0.94
PMP22-206ENST00000494511 OPRPNQ99935 248 aaPredicted RBP9.16□□□□□ -0.94
PMP22-206ENST00000494511 TIMM21Q9BVV7 248 aa9.16□□□□□ -0.94
PMP22-206ENST00000494511 ZNF561-AS1K7EIQ3 104 aa9.15□□□□□ -0.94
PMP22-206ENST00000494511 COX7A2LO14548 114 aa9.15□□□□□ -0.94
PMP22-206ENST00000494511 PHOX2AO14813 284 aa9.15□□□□□ -0.94
PMP22-206ENST00000494511 HNRNPA3P51991 378 aaKnown RBP9.15□□□□□ -0.94
PMP22-206ENST00000494511 C5orf38Q86SI9 138 aa9.15□□□□□ -0.94
PMP22-206ENST00000494511 CARD19Q96LW7 228 aa9.15□□□□□ -0.94
PMP22-206ENST00000494511 LOC389332A0A1B0GUA5 103 aa9.14□□□□□ -0.95
PMP22-206ENST00000494511 KRTAP29-1A8MX34 341 aaPredicted RBP9.14□□□□□ -0.95
PMP22-206ENST00000494511 A0A096LNI7 61 aa9.13□□□□□ -0.95
PMP22-206ENST00000494511 RAB5AP20339 215 aa9.13□□□□□ -0.95
PMP22-206ENST00000494511 IFITM2Q01629 132 aa9.13□□□□□ -0.95
PMP22-206ENST00000494511 SYCNQ0VAF6 134 aa9.13□□□□□ -0.95
PMP22-206ENST00000494511 FAM104AQ969W3 186 aa9.13□□□□□ -0.95
PMP22-206ENST00000494511 SPANXA1Q9NS26 97 aa9.13□□□□□ -0.95
PMP22-206ENST00000494511 PLAC8Q9NZF1 115 aa9.13□□□□□ -0.95
PMP22-206ENST00000494511 IGLV4-69A0A075B6H9 119 aa9.12□□□□□ -0.95
PMP22-206ENST00000494511 STPG4Q8N801 248 aa9.12□□□□□ -0.95
PMP22-206ENST00000494511 KRTAP3-3Q9BYR6 98 aa9.12□□□□□ -0.95
PMP22-206ENST00000494511 KRTAP3-2Q9BYR7 98 aa9.12□□□□□ -0.95
PMP22-206ENST00000494511 ADCYAP1P18509 176 aa9.11□□□□□ -0.95
PMP22-206ENST00000494511 IFITM10A6NMD0 228 aa9.1□□□□□ -0.95
PMP22-206ENST00000494511 Q6ZRU5 148 aa9.1□□□□□ -0.95
PMP22-206ENST00000494511 MAP1LC3AQ9H492 121 aa9.1□□□□□ -0.95
PMP22-206ENST00000494511 TMEM218A2RU14 115 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms