RNA–Protein interactions for RNA: ENST00000494422.1

BRD9-211, Transcript of bromodomain containing 9, humanhuman

TSL 3

Gene BRD9, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-211ENST00000494422 HERV-K104P63124 156 aa4.37□□□□□ -1.71
BRD9-211ENST00000494422 Q0VG73 95 aa4.37□□□□□ -1.71
BRD9-211ENST00000494422 GAGE2BQ13066 116 aa4.37□□□□□ -1.71
BRD9-211ENST00000494422 GAGE2EQ4V326 116 aa4.37□□□□□ -1.71
BRD9-211ENST00000494422 GAGE2AQ6NT46 116 aa4.37□□□□□ -1.71
BRD9-211ENST00000494422 NFE4Q86UQ8 179 aa4.37□□□□□ -1.71
BRD9-211ENST00000494422 RPL39LQ96EH5 51 aaKnown RBP4.37□□□□□ -1.71
BRD9-211ENST00000494422 YPEL4Q96NS1 127 aa4.37□□□□□ -1.71
BRD9-211ENST00000494422 TMEM243Q9BU79 118 aa4.37□□□□□ -1.71
BRD9-211ENST00000494422 SMIM2Q9BVW6 85 aa4.37□□□□□ -1.71
BRD9-211ENST00000494422 GAGE2DQ9UEU5 116 aa4.37□□□□□ -1.71
BRD9-211ENST00000494422 TRAPPC1Q9Y5R8 145 aa4.37□□□□□ -1.71
BRD9-211ENST00000494422 COX11Q9Y6N1 276 aa4.37□□□□□ -1.71
BRD9-211ENST00000494422 TRAV8-3A0A0A6YYJ7 113 aa4.36□□□□□ -1.71
BRD9-211ENST00000494422 TGIF2-C20orf24A0A0A6YYL0 155 aa4.36□□□□□ -1.71
BRD9-211ENST00000494422 NPYP01303 97 aa4.36□□□□□ -1.71
BRD9-211ENST00000494422 RAB5AP20339 215 aa4.36□□□□□ -1.71
BRD9-211ENST00000494422 FCER1GP30273 86 aa4.36□□□□□ -1.71
BRD9-211ENST00000494422 RPS10P46783 165 aaKnown RBP4.36□□□□□ -1.71
BRD9-211ENST00000494422 RAB5BP61020 215 aa4.36□□□□□ -1.71
BRD9-211ENST00000494422 FABP9Q0Z7S8 132 aa4.36□□□□□ -1.71
BRD9-211ENST00000494422 ORMDL2Q53FV1 153 aa4.36□□□□□ -1.71
BRD9-211ENST00000494422 ATRAIDQ6UW56 229 aa4.36□□□□□ -1.71
BRD9-211ENST00000494422 NIT1Q86X76 327 aa4.36□□□□□ -1.71
BRD9-211ENST00000494422 Q8N8P6 123 aa4.36□□□□□ -1.71
BRD9-211ENST00000494422 RMI2Q96E14 147 aa4.36□□□□□ -1.71
BRD9-211ENST00000494422 CHCHD5Q9BSY4 110 aa4.36□□□□□ -1.71
BRD9-211ENST00000494422 Q9UF83 564 aa4.36□□□□□ -1.71
BRD9-211ENST00000494422 CSDC2Q9Y534 153 aaKnown RBP4.36□□□□□ -1.71
BRD9-211ENST00000494422 TENM2Q9NT68 2774 aa4.36□□□□□ -1.71
BRD9-211ENST00000494422 DNAH1Q9P2D7 4330 aa4.35□□□□□ -1.71
BRD9-211ENST00000494422 VPS13DQ5THJ4 4388 aa4.35□□□□□ -1.71
BRD9-211ENST00000494422 IBA57-AS1B1ANH7 110 aa4.35□□□□□ -1.71
BRD9-211ENST00000494422 TMEM262E9PQX1 116 aa4.35□□□□□ -1.71
BRD9-211ENST00000494422 NPSP0C0P6 89 aa4.35□□□□□ -1.71
BRD9-211ENST00000494422 ESDP10768 282 aa4.35□□□□□ -1.71
BRD9-211ENST00000494422 Q6ZR54 194 aa4.35□□□□□ -1.71
BRD9-211ENST00000494422 NTM-AS1Q6ZSK4 140 aa4.35□□□□□ -1.71
BRD9-211ENST00000494422 MRPL52Q86TS9 123 aaKnown RBP4.35□□□□□ -1.71
BRD9-211ENST00000494422 WFDC10BQ8IUB3 73 aa4.35□□□□□ -1.71
BRD9-211ENST00000494422 TMEM101Q96IK0 257 aa4.35□□□□□ -1.71
BRD9-211ENST00000494422 TIMM21Q9BVV7 248 aa4.35□□□□□ -1.71
BRD9-211ENST00000494422 KRTAP9-3Q9BYQ3 159 aa4.35□□□□□ -1.71
BRD9-211ENST00000494422 DNAH6Q9C0G6 4158 aa4.35□□□□□ -1.71
BRD9-211ENST00000494422 LINC01546A6NGU7 62 aa4.34□□□□□ -1.71
BRD9-211ENST00000494422 SMKR1H3BMG3 65 aa4.34□□□□□ -1.71
BRD9-211ENST00000494422 CCL25O15444 150 aa4.34□□□□□ -1.71
BRD9-211ENST00000494422 TSHBP01222 138 aa4.34□□□□□ -1.71
BRD9-211ENST00000494422 C1orf134Q5TEV5 83 aa4.34□□□□□ -1.71
BRD9-211ENST00000494422 AMMECR1LQ6DCA0 310 aa4.34□□□□□ -1.71
BRD9-211ENST00000494422 RNASEKQ6P5S7 137 aaKnown RBP4.34□□□□□ -1.71
BRD9-211ENST00000494422 LINC00336Q6ZUF6 198 aa4.34□□□□□ -1.71
BRD9-211ENST00000494422 CBLN2Q8IUK8 224 aa4.34□□□□□ -1.71
BRD9-211ENST00000494422 PRSS3P2Q8NHM4 247 aa4.34□□□□□ -1.71
BRD9-211ENST00000494422 TM2D2Q9BX73 214 aa4.34□□□□□ -1.71
BRD9-211ENST00000494422 SACSQ9NZJ4 4579 aa4.34□□□□□ -1.72
BRD9-211ENST00000494422 KMT2CQ8NEZ4 4911 aaKnown RBP4.33□□□□□ -1.72
BRD9-211ENST00000494422 IGLV2-18A0A075B6J9 118 aa4.33□□□□□ -1.72
BRD9-211ENST00000494422 TRAV8-4A0A0B4J246 113 aa4.33□□□□□ -1.72
BRD9-211ENST00000494422 COLCA2A8K830 154 aa4.33□□□□□ -1.72
BRD9-211ENST00000494422 GAS8-AS1O95177 125 aa4.33□□□□□ -1.72
BRD9-211ENST00000494422 CRPP02741 224 aa4.33□□□□□ -1.72
BRD9-211ENST00000494422 MIAQ16674 131 aa4.33□□□□□ -1.72
BRD9-211ENST00000494422 C6orf226Q5I0X4 101 aa4.33□□□□□ -1.72
BRD9-211ENST00000494422 PAPPA-AS1Q5QFB9 102 aa4.33□□□□□ -1.72
BRD9-211ENST00000494422 C6orf223Q8N319 242 aa4.33□□□□□ -1.72
BRD9-211ENST00000494422 C20orf203Q8NBC4 194 aa4.33□□□□□ -1.72
BRD9-211ENST00000494422 SPANXA1Q9NS26 97 aa4.33□□□□□ -1.72
BRD9-211ENST00000494422 PYGO1Q9Y3Y4 419 aa4.33□□□□□ -1.72
BRD9-211ENST00000494422 KMT2AQ03164 3969 aa4.32□□□□□ -1.72
BRD9-211ENST00000494422 ANGP03950 147 aaKnown RBP4.32□□□□□ -1.72
BRD9-211ENST00000494422 FGF6P10767 208 aa4.32□□□□□ -1.72
BRD9-211ENST00000494422 IFI27P40305 119 aaPredicted RBP4.32□□□□□ -1.72
BRD9-211ENST00000494422 RBX1P62877 108 aa4.32□□□□□ -1.72
BRD9-211ENST00000494422 GAGE6Q13070 117 aa4.32□□□□□ -1.72
BRD9-211ENST00000494422 KIAA1644Q3SXP7 199 aa4.32□□□□□ -1.72
BRD9-211ENST00000494422 MPV17L2Q567V2 206 aa4.32□□□□□ -1.72
BRD9-211ENST00000494422 KRTAP5-3Q6L8H2 238 aa4.32□□□□□ -1.72
BRD9-211ENST00000494422 FA2HQ7L5A8 372 aa4.32□□□□□ -1.72
BRD9-211ENST00000494422 OR5A1Q8NGJ0 315 aa4.32□□□□□ -1.72
BRD9-211ENST00000494422 PRR34Q9NV39 138 aa4.32□□□□□ -1.72
BRD9-211ENST00000494422 CYSLTR1Q9Y271 337 aa4.32□□□□□ -1.72
BRD9-211ENST00000494422 LOC389332A0A1B0GUA5 103 aa4.31□□□□□ -1.72
BRD9-211ENST00000494422 IGHV3-30P01768 117 aa4.31□□□□□ -1.72
BRD9-211ENST00000494422 IGHV3-33P01772 117 aa4.31□□□□□ -1.72
BRD9-211ENST00000494422 LINC00614P0C842 121 aa4.31□□□□□ -1.72
BRD9-211ENST00000494422 IGHV3-30-3P0DP02 117 aa4.31□□□□□ -1.72
BRD9-211ENST00000494422 IGHV3-30-5P0DP03 117 aa4.31□□□□□ -1.72
BRD9-211ENST00000494422 MRPS36P82909 103 aaKnown RBP4.31□□□□□ -1.72
BRD9-211ENST00000494422 LINC01620Q4KN68 170 aa4.31□□□□□ -1.72
BRD9-211ENST00000494422 C18orf32Q8TCD1 76 aa4.31□□□□□ -1.72
BRD9-211ENST00000494422 CHCHD1Q96BP2 118 aaKnown RBP4.31□□□□□ -1.72
BRD9-211ENST00000494422 TIMM17AQ99595 171 aa4.31□□□□□ -1.72
BRD9-211ENST00000494422 KLK12Q9UKR0 248 aa4.31□□□□□ -1.72
BRD9-211ENST00000494422 UBE2D4Q9Y2X8 147 aa4.31□□□□□ -1.72
BRD9-211ENST00000494422 RYR2Q92736 4967 aa4.31□□□□□ -1.72
BRD9-211ENST00000494422 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.3□□□□□ -1.72
BRD9-211ENST00000494422 IGKV2-29A2NJV5 120 aaPredicted RBP4.3□□□□□ -1.72
BRD9-211ENST00000494422 C9orf118A6NHY6 69 aa4.3□□□□□ -1.72
BRD9-211ENST00000494422 M0R2N4 97 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms