RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 GATD1Q8NB37 220 aa5.25□□□□□ -1.57
RIF1-211ENST00000494333 TMEM243Q9BU79 118 aa5.25□□□□□ -1.57
RIF1-211ENST00000494333 KRTAP2-2Q9BYT5 123 aa5.25□□□□□ -1.57
RIF1-211ENST00000494333 IGLV4-60A0A075B6I1 120 aa5.24□□□□□ -1.57
RIF1-211ENST00000494333 IGLV10-54A0A075B6I4 117 aa5.24□□□□□ -1.57
RIF1-211ENST00000494333 A0A1B0GVG6 124 aa5.24□□□□□ -1.57
RIF1-211ENST00000494333 A8MWL6 223 aa5.24□□□□□ -1.57
RIF1-211ENST00000494333 UBE2L6O14933 153 aa5.24□□□□□ -1.57
RIF1-211ENST00000494333 UBE2V1Q13404 147 aa5.24□□□□□ -1.57
RIF1-211ENST00000494333 COTL1Q14019 142 aa5.24□□□□□ -1.57
RIF1-211ENST00000494333 C20orf203Q8NBC4 194 aa5.24□□□□□ -1.57
RIF1-211ENST00000494333 PGLYRP4Q96LB8 373 aa5.24□□□□□ -1.57
RIF1-211ENST00000494333 TRAV8-4A0A0B4J246 113 aa5.23□□□□□ -1.57
RIF1-211ENST00000494333 ZNF727A8MUV8 499 aa5.23□□□□□ -1.57
RIF1-211ENST00000494333 PRSS1P07477 247 aa5.23□□□□□ -1.57
RIF1-211ENST00000494333 KRTAP26-1Q6PEX3 210 aa5.23□□□□□ -1.57
RIF1-211ENST00000494333 SCXQ7RTU7 201 aa5.23□□□□□ -1.57
RIF1-211ENST00000494333 RPL39LQ96EH5 51 aaKnown RBP5.23□□□□□ -1.57
RIF1-211ENST00000494333 FAM210AQ96ND0 272 aa5.23□□□□□ -1.57
RIF1-211ENST00000494333 SMIM7Q9BQ49 75 aa5.23□□□□□ -1.57
RIF1-211ENST00000494333 SRP19P09132 144 aaKnown RBP5.22□□□□□ -1.57
RIF1-211ENST00000494333 TEX261Q6UWH6 196 aa5.22□□□□□ -1.57
RIF1-211ENST00000494333 LINC01551Q86U37 167 aa5.22□□□□□ -1.57
RIF1-211ENST00000494333 CIRBP-AS1Q8TBR5 109 aa5.22□□□□□ -1.57
RIF1-211ENST00000494333 BORCS7Q96B45 105 aa5.22□□□□□ -1.57
RIF1-211ENST00000494333 CHAC1Q9BUX1 264 aa5.22□□□□□ -1.57
RIF1-211ENST00000494333 GFRA4Q9GZZ7 299 aa5.22□□□□□ -1.57
RIF1-211ENST00000494333 IGLV5-45A0A087WSX0 123 aa5.21□□□□□ -1.58
RIF1-211ENST00000494333 A0A1B0GUT8 65 aa5.21□□□□□ -1.58
RIF1-211ENST00000494333 SDHAF1A6NFY7 115 aa5.21□□□□□ -1.58
RIF1-211ENST00000494333 HIGD1CA8MV81 97 aa5.21□□□□□ -1.58
RIF1-211ENST00000494333 NDUFS6O75380 124 aaKnown RBP5.21□□□□□ -1.58
RIF1-211ENST00000494333 C9orf163Q8N9P6 203 aa5.21□□□□□ -1.58
RIF1-211ENST00000494333 TSKUQ8WUA8 353 aa5.21□□□□□ -1.58
RIF1-211ENST00000494333 OSTCQ9NRP0 149 aa5.21□□□□□ -1.58
RIF1-211ENST00000494333 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.2□□□□□ -1.58
RIF1-211ENST00000494333 IGKV3OR2-268A0A0C4DH90 116 aa5.2□□□□□ -1.58
RIF1-211ENST00000494333 IGKV2-29A2NJV5 120 aaPredicted RBP5.2□□□□□ -1.58
RIF1-211ENST00000494333 FAM231BA6NCW3 169 aa5.2□□□□□ -1.58
RIF1-211ENST00000494333 I3L3M4 83 aa5.2□□□□□ -1.58
RIF1-211ENST00000494333 GAS8-AS1O95177 125 aa5.2□□□□□ -1.58
RIF1-211ENST00000494333 NCR2O95944 276 aa5.2□□□□□ -1.58
RIF1-211ENST00000494333 PMCHP20382 165 aa5.2□□□□□ -1.58
RIF1-211ENST00000494333 TMEM241Q24JQ0 296 aa5.2□□□□□ -1.58
RIF1-211ENST00000494333 AMMECR1LQ6DCA0 310 aa5.2□□□□□ -1.58
RIF1-211ENST00000494333 RNASEKQ6P5S7 137 aaKnown RBP5.2□□□□□ -1.58
RIF1-211ENST00000494333 TMEM191AQ9H0A3 160 aa5.2□□□□□ -1.58
RIF1-211ENST00000494333 TRBV6-5A0A0K0K1A5 114 aa5.19□□□□□ -1.58
RIF1-211ENST00000494333 H7C423 109 aa5.19□□□□□ -1.58
RIF1-211ENST00000494333 APCSP02743 223 aa5.19□□□□□ -1.58
RIF1-211ENST00000494333 FGF6P10767 208 aa5.19□□□□□ -1.58
RIF1-211ENST00000494333 RAB4AP20338 218 aa5.19□□□□□ -1.58
RIF1-211ENST00000494333 V9GYV3 84 aa5.19□□□□□ -1.58
RIF1-211ENST00000494333 C9JQL5 133 aa5.18□□□□□ -1.58
RIF1-211ENST00000494333 RPL23P62829 140 aaKnown RBP5.18□□□□□ -1.58
RIF1-211ENST00000494333 GAGE2BQ13066 116 aa5.18□□□□□ -1.58
RIF1-211ENST00000494333 RIGQ13278 110 aa5.18□□□□□ -1.58
RIF1-211ENST00000494333 GAGE2EQ4V326 116 aa5.18□□□□□ -1.58
RIF1-211ENST00000494333 FAM74A3Q4VXF1 159 aa5.18□□□□□ -1.58
RIF1-211ENST00000494333 GAGE2AQ6NT46 116 aa5.18□□□□□ -1.58
RIF1-211ENST00000494333 SDIM1Q6ZPB5 146 aa5.18□□□□□ -1.58
RIF1-211ENST00000494333 AMN1Q8IY45 258 aa5.18□□□□□ -1.58
RIF1-211ENST00000494333 NUP35Q8NFH5 326 aa5.18□□□□□ -1.58
RIF1-211ENST00000494333 ISOC2Q96AB3 205 aa5.18□□□□□ -1.58
RIF1-211ENST00000494333 RNF185Q96GF1 192 aa5.18□□□□□ -1.58
RIF1-211ENST00000494333 BTF3L4Q96K17 158 aa5.18□□□□□ -1.58
RIF1-211ENST00000494333 ST20Q9HBF5 79 aa5.18□□□□□ -1.58
RIF1-211ENST00000494333 GAGE2DQ9UEU5 116 aa5.18□□□□□ -1.58
RIF1-211ENST00000494333 FAT1Q14517 4588 aa5.17□□□□□ -1.58
RIF1-211ENST00000494333 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.17□□□□□ -1.58
RIF1-211ENST00000494333 PRSS47A8MTI9 375 aa5.17□□□□□ -1.58
RIF1-211ENST00000494333 RPS10P46783 165 aaKnown RBP5.17□□□□□ -1.58
RIF1-211ENST00000494333 POLR2KP53803 58 aaKnown RBP5.17□□□□□ -1.58
RIF1-211ENST00000494333 LINC01547P58512 204 aaPredicted RBP5.17□□□□□ -1.58
RIF1-211ENST00000494333 CNBPP62633 177 aaKnown RBP5.17□□□□□ -1.58
RIF1-211ENST00000494333 PEA15Q15121 130 aa5.17□□□□□ -1.58
RIF1-211ENST00000494333 ADIRFQ15847 76 aa5.17□□□□□ -1.58
RIF1-211ENST00000494333 CHCHD10Q8WYQ3 142 aaPredicted RBP5.17□□□□□ -1.58
RIF1-211ENST00000494333 DPH3Q96FX2 82 aa5.17□□□□□ -1.58
RIF1-211ENST00000494333 MRAP2Q96G30 205 aa5.17□□□□□ -1.58
RIF1-211ENST00000494333 TMEM242Q9NWH2 141 aa5.17□□□□□ -1.58
RIF1-211ENST00000494333 NAT8BQ9UHF3 227 aa5.17□□□□□ -1.58
RIF1-211ENST00000494333 FLG2Q5D862 2391 aaPredicted RBP5.16□□□□□ -1.58
RIF1-211ENST00000494333 SMKR1H3BMG3 65 aa5.16□□□□□ -1.58
RIF1-211ENST00000494333 PANO1I0J062 215 aa5.16□□□□□ -1.58
RIF1-211ENST00000494333 TSHBP01222 138 aa5.16□□□□□ -1.58
RIF1-211ENST00000494333 ESDP10768 282 aa5.16□□□□□ -1.58
RIF1-211ENST00000494333 ZNF25P17030 456 aaPredicted RBP5.16□□□□□ -1.58
RIF1-211ENST00000494333 SNRPEP62304 92 aaKnown RBP5.16□□□□□ -1.58
RIF1-211ENST00000494333 CFAP161Q6P656 301 aa5.16□□□□□ -1.58
RIF1-211ENST00000494333 OR5A1Q8NGJ0 315 aa5.16□□□□□ -1.58
RIF1-211ENST00000494333 TMEM101Q96IK0 257 aa5.16□□□□□ -1.58
RIF1-211ENST00000494333 NAT8Q9UHE5 227 aa5.16□□□□□ -1.58
RIF1-211ENST00000494333 IGHV3-64A0A075B6Q5 118 aa5.15□□□□□ -1.59
RIF1-211ENST00000494333 TRBV27A0A0K0K1C4 114 aa5.15□□□□□ -1.59
RIF1-211ENST00000494333 KRTAP10-4P60372 401 aaPredicted RBP5.15□□□□□ -1.59
RIF1-211ENST00000494333 HIGD2BQ4VC39 106 aa5.15□□□□□ -1.59
RIF1-211ENST00000494333 C15orf56Q8N910 161 aa5.15□□□□□ -1.59
RIF1-211ENST00000494333 SMDT1Q9H4I9 107 aa5.15□□□□□ -1.59
RIF1-211ENST00000494333 LINC00959A0A1B0GUT2 108 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms