RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 ATRXP46100 2492 aa14.2□□□□□ -0.14
COL27A1-207ENST00000494090 KIAA1549Q9HCM3 1950 aa14.2□□□□□ -0.14
COL27A1-207ENST00000494090 ATP5EP2Q5VTU8 51 aa14.2□□□□□ -0.14
COL27A1-207ENST00000494090 RNASE3P12724 160 aaKnown RBP14.19□□□□□ -0.14
COL27A1-207ENST00000494090 LY6G6DO95868 133 aa14.18□□□□□ -0.14
COL27A1-207ENST00000494090 C2orf91Q6ZV80 131 aa14.18□□□□□ -0.14
COL27A1-207ENST00000494090 C7orf33Q8WU49 177 aa14.18□□□□□ -0.14
COL27A1-207ENST00000494090 C11orf21Q9P2W6 132 aa14.18□□□□□ -0.14
COL27A1-207ENST00000494090 CACNA1AO00555 2505 aa14.18□□□□□ -0.14
COL27A1-207ENST00000494090 MT-ATP8P03928 68 aa14.18□□□□□ -0.14
COL27A1-207ENST00000494090 IGKV4-1P06312 121 aa14.18□□□□□ -0.14
COL27A1-207ENST00000494090 TRIAP1O43715 76 aa14.17□□□□□ -0.14
COL27A1-207ENST00000494090 LINC00482Q8N8I6 264 aa14.17□□□□□ -0.14
COL27A1-207ENST00000494090 KLLNB2CW77 178 aa14.16□□□□□ -0.14
COL27A1-207ENST00000494090 C10orf99Q6UWK7 81 aa14.16□□□□□ -0.14
COL27A1-207ENST00000494090 WNK1Q9H4A3 2382 aa14.16□□□□□ -0.14
COL27A1-207ENST00000494090 PRR9Q5T870 116 aa14.16□□□□□ -0.14
COL27A1-207ENST00000494090 LINC01006Q8NI28 216 aa14.16□□□□□ -0.14
COL27A1-207ENST00000494090 SONP18583 2426 aaKnown RBP14.16□□□□□ -0.14
COL27A1-207ENST00000494090 TSHBP01222 138 aa14.16□□□□□ -0.14
COL27A1-207ENST00000494090 NDUFV3P56181 108 aaKnown RBP14.15□□□□□ -0.14
COL27A1-207ENST00000494090 PROK1P58294 105 aa14.15□□□□□ -0.14
COL27A1-207ENST00000494090 PRR14LQ5THK1 2151 aa14.15□□□□□ -0.14
COL27A1-207ENST00000494090 TIMM17BO60830 172 aa14.15□□□□□ -0.14
COL27A1-207ENST00000494090 CD164L2Q6UWJ8 174 aa14.14□□□□□ -0.15
COL27A1-207ENST00000494090 CNFNQ9BYD5 112 aa14.14□□□□□ -0.15
COL27A1-207ENST00000494090 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.13□□□□□ -0.15
COL27A1-207ENST00000494090 RBX1P62877 108 aa14.13□□□□□ -0.15
COL27A1-207ENST00000494090 CEP192Q8TEP8 1941 aa14.13□□□□□ -0.15
COL27A1-207ENST00000494090 POLR2KP53803 58 aaKnown RBP14.13□□□□□ -0.15
COL27A1-207ENST00000494090 PRB2P02812 416 aaPredicted RBP14.12□□□□□ -0.15
COL27A1-207ENST00000494090 PIK3CD-AS1Q5SR53 167 aa14.12□□□□□ -0.15
COL27A1-207ENST00000494090 LELP1Q5T871 98 aa14.12□□□□□ -0.15
COL27A1-207ENST00000494090 ZNF706Q9Y5V0 76 aaPredicted RBP14.12□□□□□ -0.15
COL27A1-207ENST00000494090 C9orf85Q96MD7 179 aa14.12□□□□□ -0.15
COL27A1-207ENST00000494090 IGLV1-40P01703 118 aa14.11□□□□□ -0.15
COL27A1-207ENST00000494090 BBC3Q96PG8 261 aaPredicted RBP14.11□□□□□ -0.15
COL27A1-207ENST00000494090 MRGPRG-AS1Q2M3A8 158 aa14.11□□□□□ -0.15
COL27A1-207ENST00000494090 CASC2Q6XLA1 102 aa14.11□□□□□ -0.15
COL27A1-207ENST00000494090 DSCAML1Q8TD84 2053 aa14.11□□□□□ -0.15
COL27A1-207ENST00000494090 FAM19A5Q7Z5A7 132 aaPredicted RBP14.11□□□□□ -0.15
COL27A1-207ENST00000494090 MUC7Q8TAX7 377 aa14.11□□□□□ -0.15
COL27A1-207ENST00000494090 ATG2AQ2TAZ0 1938 aa14.1□□□□□ -0.15
COL27A1-207ENST00000494090 TRAV23DV6A0A075B6W5 121 aa14.09□□□□□ -0.15
COL27A1-207ENST00000494090 LINC00310P59036 64 aa14.09□□□□□ -0.15
COL27A1-207ENST00000494090 PTPN13Q12923 2485 aa14.09□□□□□ -0.15
COL27A1-207ENST00000494090 HCFC1P51610 2035 aa14.09□□□□□ -0.15
COL27A1-207ENST00000494090 USP17L23D6RBM5 183 aa14.09□□□□□ -0.15
COL27A1-207ENST00000494090 XAGE1AQ9HD64 81 aa14.09□□□□□ -0.15
COL27A1-207ENST00000494090 MRPS36P82909 103 aaKnown RBP14.09□□□□□ -0.15
COL27A1-207ENST00000494090 Q8N976 141 aa14.09□□□□□ -0.15
COL27A1-207ENST00000494090 DHRS4-AS1Q9P1J3 65 aa14.09□□□□□ -0.15
COL27A1-207ENST00000494090 KPRPQ5T749 579 aaPredicted RBP14.08□□□□□ -0.15
COL27A1-207ENST00000494090 IGLV4-69A0A075B6H9 119 aa14.08□□□□□ -0.16
COL27A1-207ENST00000494090 DSCAMO60469 2012 aa14.08□□□□□ -0.16
COL27A1-207ENST00000494090 GAS8-AS1O95177 125 aa14.08□□□□□ -0.16
COL27A1-207ENST00000494090 UQCRQO14949 82 aa14.07□□□□□ -0.16
COL27A1-207ENST00000494090 LRCOL1A6NCL2 159 aa14.07□□□□□ -0.16
COL27A1-207ENST00000494090 M0R378 163 aa14.07□□□□□ -0.16
COL27A1-207ENST00000494090 SDIM1Q6ZPB5 146 aa14.07□□□□□ -0.16
COL27A1-207ENST00000494090 DCANP1Q8TF63 244 aa14.07□□□□□ -0.16
COL27A1-207ENST00000494090 UBE2D4Q9Y2X8 147 aa14.07□□□□□ -0.16
COL27A1-207ENST00000494090 A0A096LNI7 61 aa14.07□□□□□ -0.16
COL27A1-207ENST00000494090 MRPS12O15235 138 aaKnown RBP14.07□□□□□ -0.16
COL27A1-207ENST00000494090 C6orf99Q4VX62 202 aa14.06□□□□□ -0.16
COL27A1-207ENST00000494090 SORL1Q92673 2214 aa14.06□□□□□ -0.16
COL27A1-207ENST00000494090 SLPIP03973 132 aa14.06□□□□□ -0.16
COL27A1-207ENST00000494090 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.06□□□□□ -0.16
COL27A1-207ENST00000494090 NDUFA7O95182 113 aa14.06□□□□□ -0.16
COL27A1-207ENST00000494090 A8MZ25 164 aa14.05□□□□□ -0.16
COL27A1-207ENST00000494090 LRP4O75096 1905 aa14.05□□□□□ -0.16
COL27A1-207ENST00000494090 LOC107984640A0A0U1RRK4 108 aa14.04□□□□□ -0.16
COL27A1-207ENST00000494090 PLXNB1O43157 2135 aa14.04□□□□□ -0.16
COL27A1-207ENST00000494090 URB1-AS1Q96HZ7 61 aa14.04□□□□□ -0.16
COL27A1-207ENST00000494090 NAV3Q8IVL0 2385 aa14.03□□□□□ -0.16
COL27A1-207ENST00000494090 COX17Q14061 63 aa14.03□□□□□ -0.16
COL27A1-207ENST00000494090 Q6ZS46 218 aa14.03□□□□□ -0.16
COL27A1-207ENST00000494090 LINC00959A0A1B0GUT2 108 aa14.02□□□□□ -0.16
COL27A1-207ENST00000494090 LINC00474Q9P2X8 69 aa14.02□□□□□ -0.16
COL27A1-207ENST00000494090 LST1O00453 97 aa14.02□□□□□ -0.17
COL27A1-207ENST00000494090 UBE2D1P51668 147 aa14.02□□□□□ -0.17
COL27A1-207ENST00000494090 CCKP06307 115 aa14.01□□□□□ -0.17
COL27A1-207ENST00000494090 TANC2Q9HCD6 1990 aa14.01□□□□□ -0.17
COL27A1-207ENST00000494090 NAV2Q8IVL1 2488 aa14□□□□□ -0.17
COL27A1-207ENST00000494090 IGIPA6NJ69 53 aa14□□□□□ -0.17
COL27A1-207ENST00000494090 ENHOQ6UWT2 76 aa13.99□□□□□ -0.17
COL27A1-207ENST00000494090 C20orf197Q8N268 126 aa13.99□□□□□ -0.17
COL27A1-207ENST00000494090 C3orf22Q8N5N4 141 aa13.99□□□□□ -0.17
COL27A1-207ENST00000494090 C18orf65Q6ZTR6 163 aa13.98□□□□□ -0.17
COL27A1-207ENST00000494090 CHCHD7Q9BUK0 85 aa13.97□□□□□ -0.17
COL27A1-207ENST00000494090 C1orf158Q8N1D5 194 aa13.97□□□□□ -0.17
COL27A1-207ENST00000494090 PLA2G2AP14555 144 aa13.97□□□□□ -0.17
COL27A1-207ENST00000494090 UBE2D3P61077 147 aa13.97□□□□□ -0.17
COL27A1-207ENST00000494090 UBE2D2P62837 147 aa13.97□□□□□ -0.17
COL27A1-207ENST00000494090 IMUPQ9GZP8 106 aa13.97□□□□□ -0.17
COL27A1-207ENST00000494090 Q8IZM0 81 aa13.96□□□□□ -0.17
COL27A1-207ENST00000494090 K7ERS5 55 aa13.96□□□□□ -0.17
COL27A1-207ENST00000494090 CDSNQ15517 529 aa13.96□□□□□ -0.18
COL27A1-207ENST00000494090 CLUHP3Q96NS8 147 aa13.95□□□□□ -0.18
COL27A1-207ENST00000494090 CRIP2P52943 208 aaPredicted RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms