RNA–Protein interactions for RNA: ENST00000493743.1

SEMA3F-209, Transcript of semaphorin 3F, humanhuman

TSL 3

Gene SEMA3F, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-209ENST00000493743 PLAC8L1A1L4L8 177 aa5.47□□□□□ -1.53
SEMA3F-209ENST00000493743 F2Z2F3 143 aa5.47□□□□□ -1.53
SEMA3F-209ENST00000493743 SNCGO76070 127 aa5.47□□□□□ -1.53
SEMA3F-209ENST00000493743 IGKV2D-40P01614 121 aaPredicted RBP5.47□□□□□ -1.53
SEMA3F-209ENST00000493743 TMEM258P61165 79 aa5.47□□□□□ -1.53
SEMA3F-209ENST00000493743 LINC01559Q495D7 138 aa5.47□□□□□ -1.53
SEMA3F-209ENST00000493743 IGFL4Q6B9Z1 124 aa5.47□□□□□ -1.53
SEMA3F-209ENST00000493743 COPS9Q8WXC6 57 aa5.47□□□□□ -1.53
SEMA3F-209ENST00000493743 C16orf74Q96GX8 76 aa5.47□□□□□ -1.53
SEMA3F-209ENST00000493743 ZC2HC1AQ96GY0 325 aa5.47□□□□□ -1.53
SEMA3F-209ENST00000493743 PKIGQ9Y2B9 76 aa5.47□□□□□ -1.53
SEMA3F-209ENST00000493743 TRAV12-2A0A075B6T6 113 aa5.46□□□□□ -1.54
SEMA3F-209ENST00000493743 A0A1W2PPM0 123 aa5.46□□□□□ -1.54
SEMA3F-209ENST00000493743 KLLNB2CW77 178 aa5.46□□□□□ -1.54
SEMA3F-209ENST00000493743 PRAC2D3DTV9 90 aa5.46□□□□□ -1.54
SEMA3F-209ENST00000493743 UQCRQO14949 82 aa5.46□□□□□ -1.54
SEMA3F-209ENST00000493743 MAPKAPK5-AS1Q8N8E1 139 aa5.46□□□□□ -1.54
SEMA3F-209ENST00000493743 KCNS1Q96KK3 526 aa5.46□□□□□ -1.54
SEMA3F-209ENST00000493743 LINC01587Q99440 93 aa5.46□□□□□ -1.54
SEMA3F-209ENST00000493743 GNB1LQ9BYB4 327 aa5.46□□□□□ -1.54
SEMA3F-209ENST00000493743 LINC00588Q9Y4M8 146 aa5.46□□□□□ -1.54
SEMA3F-209ENST00000493743 TIMM8BQ9Y5J9 83 aaPredicted RBP5.46□□□□□ -1.54
SEMA3F-209ENST00000493743 FAM236DA0A1B0GTK5 79 aa5.45□□□□□ -1.54
SEMA3F-209ENST00000493743 HIGD1CA8MV81 97 aa5.45□□□□□ -1.54
SEMA3F-209ENST00000493743 HLA-DQA1P01909 254 aa5.45□□□□□ -1.54
SEMA3F-209ENST00000493743 FAM236CP0DP71 79 aa5.45□□□□□ -1.54
SEMA3F-209ENST00000493743 HTN1P15515 57 aa5.45□□□□□ -1.54
SEMA3F-209ENST00000493743 SLC25A34Q6PIV7 304 aa5.45□□□□□ -1.54
SEMA3F-209ENST00000493743 ZNF493Q6ZR52 646 aa5.45□□□□□ -1.54
SEMA3F-209ENST00000493743 C10orf126Q8N4M7 172 aa5.45□□□□□ -1.54
SEMA3F-209ENST00000493743 TMEM263Q8WUH6 116 aaKnown RBP5.45□□□□□ -1.54
SEMA3F-209ENST00000493743 A0A1B0GUT8 65 aa5.44□□□□□ -1.54
SEMA3F-209ENST00000493743 H3BMG7 143 aa5.44□□□□□ -1.54
SEMA3F-209ENST00000493743 SH2D1AO60880 128 aa5.44□□□□□ -1.54
SEMA3F-209ENST00000493743 CRIP1P50238 77 aa5.44□□□□□ -1.54
SEMA3F-209ENST00000493743 ERCC8Q13216 396 aa5.44□□□□□ -1.54
SEMA3F-209ENST00000493743 RIGQ13278 110 aa5.44□□□□□ -1.54
SEMA3F-209ENST00000493743 ZFAND2AQ8N6M9 145 aa5.44□□□□□ -1.54
SEMA3F-209ENST00000493743 C18orf32Q8TCD1 76 aa5.44□□□□□ -1.54
SEMA3F-209ENST00000493743 CNFNQ9BYD5 112 aa5.44□□□□□ -1.54
SEMA3F-209ENST00000493743 Q9H8V8 135 aa5.44□□□□□ -1.54
SEMA3F-209ENST00000493743 NOP10Q9NPE3 64 aaKnown RBP5.44□□□□□ -1.54
SEMA3F-209ENST00000493743 CACNG7P62955 275 aa5.43□□□□□ -1.54
SEMA3F-209ENST00000493743 HERVK_113P63121 156 aa5.43□□□□□ -1.54
SEMA3F-209ENST00000493743 HBBP68871 147 aa5.43□□□□□ -1.54
SEMA3F-209ENST00000493743 MPV17L2Q567V2 206 aa5.43□□□□□ -1.54
SEMA3F-209ENST00000493743 HRCT1Q6UXD1 115 aa5.43□□□□□ -1.54
SEMA3F-209ENST00000493743 SPATA12Q7Z6I5 190 aa5.43□□□□□ -1.54
SEMA3F-209ENST00000493743 ATOH7Q8N100 152 aa5.43□□□□□ -1.54
SEMA3F-209ENST00000493743 Q8N1X5 172 aa5.43□□□□□ -1.54
SEMA3F-209ENST00000493743 C3orf22Q8N5N4 141 aa5.43□□□□□ -1.54
SEMA3F-209ENST00000493743 LINC00612Q8N6U2 182 aa5.43□□□□□ -1.54
SEMA3F-209ENST00000493743 Q8TAT8 98 aa5.43□□□□□ -1.54
SEMA3F-209ENST00000493743 RASL10AQ92737 203 aa5.43□□□□□ -1.54
SEMA3F-209ENST00000493743 LINC00526Q96FQ7 95 aa5.43□□□□□ -1.54
SEMA3F-209ENST00000493743 C8orf49Q96NF6 230 aa5.43□□□□□ -1.54
SEMA3F-209ENST00000493743 LINC00467Q9BRT7 94 aa5.43□□□□□ -1.54
SEMA3F-209ENST00000493743 TP53TG3Q9ULZ0 132 aa5.43□□□□□ -1.54
SEMA3F-209ENST00000493743 LRP1BQ9NZR2 4599 aa5.42□□□□□ -1.54
SEMA3F-209ENST00000493743 LOC107984640A0A0U1RRK4 108 aa5.42□□□□□ -1.54
SEMA3F-209ENST00000493743 A0A1B0GXF2 115 aa5.42□□□□□ -1.54
SEMA3F-209ENST00000493743 MT-ATP8P03928 68 aa5.42□□□□□ -1.54
SEMA3F-209ENST00000493743 PIK3CD-AS1Q5SR53 167 aa5.42□□□□□ -1.54
SEMA3F-209ENST00000493743 C9orf153Q5TBE3 101 aa5.42□□□□□ -1.54
SEMA3F-209ENST00000493743 UPK3BQ9BT76 320 aa5.42□□□□□ -1.54
SEMA3F-209ENST00000493743 KRTAP1-5Q9BYS1 174 aa5.42□□□□□ -1.54
SEMA3F-209ENST00000493743 IMUPQ9GZP8 106 aa5.42□□□□□ -1.54
SEMA3F-209ENST00000493743 TRAPPC1Q9Y5R8 145 aa5.42□□□□□ -1.54
SEMA3F-209ENST00000493743 A0A0J9YY99 117 aa5.41□□□□□ -1.54
SEMA3F-209ENST00000493743 SNURFLB1AK76 121 aa5.41□□□□□ -1.54
SEMA3F-209ENST00000493743 H3BNG1 76 aa5.41□□□□□ -1.54
SEMA3F-209ENST00000493743 ZNF324O75467 553 aaPredicted RBP5.41□□□□□ -1.54
SEMA3F-209ENST00000493743 PRB4P10163 310 aaPredicted RBP5.41□□□□□ -1.54
SEMA3F-209ENST00000493743 ZNF80P51504 273 aaPredicted RBP5.41□□□□□ -1.54
SEMA3F-209ENST00000493743 RPL18AQ02543 176 aaKnown RBP5.41□□□□□ -1.54
SEMA3F-209ENST00000493743 KIR3DS1Q14943 382 aa5.41□□□□□ -1.54
SEMA3F-209ENST00000493743 GAGE2AQ6NT46 116 aa5.41□□□□□ -1.54
SEMA3F-209ENST00000493743 Q6ZVH6 145 aa5.41□□□□□ -1.54
SEMA3F-209ENST00000493743 GTSF1Q8WW33 167 aa5.41□□□□□ -1.54
SEMA3F-209ENST00000493743 NAA38Q9BRA0 125 aaKnown RBP5.41□□□□□ -1.54
SEMA3F-209ENST00000493743 SCRT2Q9NQ03 307 aa5.41□□□□□ -1.54
SEMA3F-209ENST00000493743 Q9UF83 564 aa5.41□□□□□ -1.54
SEMA3F-209ENST00000493743 APOBP04114 4563 aaKnown RBP5.41□□□□□ -1.54
SEMA3F-209ENST00000493743 TRGV11A0A075B6L2 103 aa5.4□□□□□ -1.54
SEMA3F-209ENST00000493743 IGKV3D-20A0A0C4DH25 116 aa5.4□□□□□ -1.54
SEMA3F-209ENST00000493743 MUC21A0A0G2JKD1 596 aa5.4□□□□□ -1.54
SEMA3F-209ENST00000493743 MUC21A0A140T8X8 626 aa5.4□□□□□ -1.54
SEMA3F-209ENST00000493743 FAM240AA0A1B0GVK7 77 aa5.4□□□□□ -1.54
SEMA3F-209ENST00000493743 A0A1B0GWB2 263 aa5.4□□□□□ -1.54
SEMA3F-209ENST00000493743 H7C1H1 209 aa5.4□□□□□ -1.54
SEMA3F-209ENST00000493743 J3QQQ9 107 aa5.4□□□□□ -1.54
SEMA3F-209ENST00000493743 M0R2P5 195 aa5.4□□□□□ -1.54
SEMA3F-209ENST00000493743 APOMO95445 188 aa5.4□□□□□ -1.54
SEMA3F-209ENST00000493743 RNASE4P34096 147 aaKnown RBP5.4□□□□□ -1.54
SEMA3F-209ENST00000493743 ESRGQ1W209 222 aa5.4□□□□□ -1.54
SEMA3F-209ENST00000493743 MUC21Q5SSG8 566 aa5.4□□□□□ -1.54
SEMA3F-209ENST00000493743 TMEM136Q6ZRR5 245 aa5.4□□□□□ -1.54
SEMA3F-209ENST00000493743 PPDPFLQ8WWR9 84 aa5.4□□□□□ -1.54
SEMA3F-209ENST00000493743 IGHV1OR15-1A0A075B7D0 117 aa5.39□□□□□ -1.55
SEMA3F-209ENST00000493743 TRAV26-2A0A0B4J265 109 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms