RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 C1orf43Q9BWL3 253 aa7.74□□□□□ -1.17
CTSA-209ENST00000493522 MRPL18Q9H0U6 180 aaKnown RBP7.74□□□□□ -1.17
CTSA-209ENST00000493522 EREGO14944 169 aa7.73□□□□□ -1.17
CTSA-209ENST00000493522 TCAPO15273 167 aa7.73□□□□□ -1.17
CTSA-209ENST00000493522 REG3AQ06141 175 aa7.73□□□□□ -1.17
CTSA-209ENST00000493522 MIAQ16674 131 aa7.73□□□□□ -1.17
CTSA-209ENST00000493522 ENHOQ6UWT2 76 aa7.73□□□□□ -1.17
CTSA-209ENST00000493522 CBLN2Q8IUK8 224 aa7.73□□□□□ -1.17
CTSA-209ENST00000493522 TMEM101Q96IK0 257 aa7.73□□□□□ -1.17
CTSA-209ENST00000493522 FAT1Q14517 4588 aa7.73□□□□□ -1.17
CTSA-209ENST00000493522 IGKV3OR2-268A0A0C4DH90 116 aa7.72□□□□□ -1.17
CTSA-209ENST00000493522 ZNF25P17030 456 aaPredicted RBP7.72□□□□□ -1.17
CTSA-209ENST00000493522 RAB5AP20339 215 aa7.72□□□□□ -1.17
CTSA-209ENST00000493522 FABP9Q0Z7S8 132 aa7.72□□□□□ -1.17
CTSA-209ENST00000493522 OR5A1Q8NGJ0 315 aa7.72□□□□□ -1.17
CTSA-209ENST00000493522 SMCO4Q9NRQ5 59 aa7.72□□□□□ -1.17
CTSA-209ENST00000493522 COX11Q9Y6N1 276 aa7.72□□□□□ -1.17
CTSA-209ENST00000493522 A0A087WTM6 91 aa7.71□□□□□ -1.18
CTSA-209ENST00000493522 SMAGPQ0VAQ4 97 aa7.71□□□□□ -1.18
CTSA-209ENST00000493522 DGAT2L7PQ6IED9 249 aa7.71□□□□□ -1.18
CTSA-209ENST00000493522 Q8N8P6 123 aa7.71□□□□□ -1.18
CTSA-209ENST00000493522 TMEM18Q96B42 140 aa7.71□□□□□ -1.18
CTSA-209ENST00000493522 PRR34Q9NV39 138 aa7.71□□□□□ -1.18
CTSA-209ENST00000493522 TRAPPC1Q9Y5R8 145 aa7.71□□□□□ -1.18
CTSA-209ENST00000493522 IGLV10-54A0A075B6I4 117 aa7.7□□□□□ -1.18
CTSA-209ENST00000493522 MRPL52Q86TS9 123 aaKnown RBP7.7□□□□□ -1.18
CTSA-209ENST00000493522 DMBT1Q9UGM3 2413 aaPredicted RBP7.7□□□□□ -1.18
CTSA-209ENST00000493522 PRSS47A8MTI9 375 aa7.69□□□□□ -1.18
CTSA-209ENST00000493522 LECT2O14960 151 aa7.69□□□□□ -1.18
CTSA-209ENST00000493522 RPL39P62891 51 aaKnown RBP7.69□□□□□ -1.18
CTSA-209ENST00000493522 YPEL4Q96NS1 127 aa7.69□□□□□ -1.18
CTSA-209ENST00000493522 ALKBH7Q9BT30 221 aaPredicted RBP7.69□□□□□ -1.18
CTSA-209ENST00000493522 NXT2Q9NPJ8 142 aaKnown RBP7.69□□□□□ -1.18
CTSA-209ENST00000493522 UBE2D4Q9Y2X8 147 aa7.69□□□□□ -1.18
CTSA-209ENST00000493522 MYCBP2O75592 4640 aa7.69□□□□□ -1.18
CTSA-209ENST00000493522 IFI27P40305 119 aaPredicted RBP7.68□□□□□ -1.18
CTSA-209ENST00000493522 KRTAP10-2P60368 255 aa7.68□□□□□ -1.18
CTSA-209ENST00000493522 LCE2CQ5TA81 110 aa7.68□□□□□ -1.18
CTSA-209ENST00000493522 Q6ZUT4 128 aa7.68□□□□□ -1.18
CTSA-209ENST00000493522 BAALCQ8WXS3 180 aa7.68□□□□□ -1.18
CTSA-209ENST00000493522 TRAV8-4A0A0B4J246 113 aa7.67□□□□□ -1.18
CTSA-209ENST00000493522 LRCOL1A6NCL2 159 aa7.67□□□□□ -1.18
CTSA-209ENST00000493522 EPM2AB3EWF7 344 aa7.67□□□□□ -1.18
CTSA-209ENST00000493522 WFDC2Q14508 124 aa7.67□□□□□ -1.18
CTSA-209ENST00000493522 ORMDL2Q53FV1 153 aa7.67□□□□□ -1.18
CTSA-209ENST00000493522 RNASE13Q5GAN3 156 aaKnown RBP7.67□□□□□ -1.18
CTSA-209ENST00000493522 ZNF664Q8N3J9 261 aa7.67□□□□□ -1.18
CTSA-209ENST00000493522 PRSS3P2Q8NHM4 247 aa7.67□□□□□ -1.18
CTSA-209ENST00000493522 TIMM21Q9BVV7 248 aa7.67□□□□□ -1.18
CTSA-209ENST00000493522 SPANXA1Q9NS26 97 aa7.67□□□□□ -1.18
CTSA-209ENST00000493522 VPS13BQ7Z7G8 4022 aa7.66□□□□□ -1.18
CTSA-209ENST00000493522 K7EMI3 77 aa7.66□□□□□ -1.18
CTSA-209ENST00000493522 CDC42SE2Q9NRR3 84 aa7.66□□□□□ -1.18
CTSA-209ENST00000493522 CYSLTR1Q9Y271 337 aa7.66□□□□□ -1.18
CTSA-209ENST00000493522 CSDC2Q9Y534 153 aaKnown RBP7.66□□□□□ -1.18
CTSA-209ENST00000493522 FUSP35637 526 aaKnown RBP eCLIP7.65□□□□□ -1.18
CTSA-209ENST00000493522 C2orf66Q6UXQ4 117 aa7.65□□□□□ -1.18
CTSA-209ENST00000493522 FA2HQ7L5A8 372 aa7.65□□□□□ -1.18
CTSA-209ENST00000493522 Q8N814 137 aa7.65□□□□□ -1.18
CTSA-209ENST00000493522 CHCHD10Q8WYQ3 142 aaPredicted RBP7.65□□□□□ -1.18
CTSA-209ENST00000493522 GAGE12HA6NDE8 117 aa7.64□□□□□ -1.19
CTSA-209ENST00000493522 SCO1O75880 301 aa7.64□□□□□ -1.19
CTSA-209ENST00000493522 SS18Q15532 418 aa7.64□□□□□ -1.19
CTSA-209ENST00000493522 KRTAP26-1Q6PEX3 210 aa7.64□□□□□ -1.19
CTSA-209ENST00000493522 C18orf32Q8TCD1 76 aa7.64□□□□□ -1.19
CTSA-209ENST00000493522 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.63□□□□□ -1.19
CTSA-209ENST00000493522 LINC00959A0A1B0GUT2 108 aa7.63□□□□□ -1.19
CTSA-209ENST00000493522 USP17L23D6RBM5 183 aa7.63□□□□□ -1.19
CTSA-209ENST00000493522 CCL25O15444 150 aa7.63□□□□□ -1.19
CTSA-209ENST00000493522 XCL1P47992 114 aa7.63□□□□□ -1.19
CTSA-209ENST00000493522 CDPF1Q6NVV7 123 aa7.63□□□□□ -1.19
CTSA-209ENST00000493522 OPRPNQ99935 248 aaPredicted RBP7.63□□□□□ -1.19
CTSA-209ENST00000493522 PGPEP1Q9NXJ5 209 aa7.63□□□□□ -1.19
CTSA-209ENST00000493522 IGLV5-52A0A0A0MRZ9 124 aa7.62□□□□□ -1.19
CTSA-209ENST00000493522 TRAV13-1A0A0B4J241 112 aa7.62□□□□□ -1.19
CTSA-209ENST00000493522 IFITM10A6NMD0 228 aa7.62□□□□□ -1.19
CTSA-209ENST00000493522 INAFM2P0DMQ5 153 aa7.62□□□□□ -1.19
CTSA-209ENST00000493522 G0S2P27469 103 aa7.62□□□□□ -1.19
CTSA-209ENST00000493522 MRPS36P82909 103 aaKnown RBP7.62□□□□□ -1.19
CTSA-209ENST00000493522 C14orf177Q52M58 125 aa7.62□□□□□ -1.19
CTSA-209ENST00000493522 NTN5Q8WTR8 489 aaPredicted RBP7.62□□□□□ -1.19
CTSA-209ENST00000493522 PYGO1Q9Y3Y4 419 aa7.62□□□□□ -1.19
CTSA-209ENST00000493522 IGLV4-3A0A075B6K6 122 aa7.61□□□□□ -1.19
CTSA-209ENST00000493522 Q6ZN92 141 aa7.61□□□□□ -1.19
CTSA-209ENST00000493522 TMEM141Q96I45 108 aa7.61□□□□□ -1.19
CTSA-209ENST00000493522 AP5S1Q9NUS5 200 aa7.61□□□□□ -1.19
CTSA-209ENST00000493522 LINC01546A6NGU7 62 aa7.6□□□□□ -1.19
CTSA-209ENST00000493522 COLCA2A8K830 154 aa7.6□□□□□ -1.19
CTSA-209ENST00000493522 TRGC2P03986 189 aa7.6□□□□□ -1.19
CTSA-209ENST00000493522 FAM104AQ969W3 186 aa7.6□□□□□ -1.19
CTSA-209ENST00000493522 C1orf196B1AJZ1 125 aa7.59□□□□□ -1.19
CTSA-209ENST00000493522 ATP6V1G1O75348 118 aa7.59□□□□□ -1.19
CTSA-209ENST00000493522 RAB5BP61020 215 aa7.59□□□□□ -1.19
CTSA-209ENST00000493522 FOXI1Q12951 378 aa7.59□□□□□ -1.19
CTSA-209ENST00000493522 Q5VSD8 79 aa7.59□□□□□ -1.19
CTSA-209ENST00000493522 TEX43Q6ZNM6 134 aa7.59□□□□□ -1.19
CTSA-209ENST00000493522 TOMM6Q96B49 74 aa7.59□□□□□ -1.19
CTSA-209ENST00000493522 SCGB3A1Q96QR1 104 aa7.59□□□□□ -1.19
CTSA-209ENST00000493522 C2orf88Q9BSF0 95 aa7.59□□□□□ -1.19
CTSA-209ENST00000493522 hDV102S1A0JD36 115 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms