RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 AKR1C3P42330 323 aa1.78□□□□□ -2.12
PTCD3-218ENST00000493430 KRTAP10-4P60372 401 aaPredicted RBP1.78□□□□□ -2.12
PTCD3-218ENST00000493430 ZNF56Q15929 161 aa1.78□□□□□ -2.12
PTCD3-218ENST00000493430 SMUG1Q53HV7 270 aa1.78□□□□□ -2.12
PTCD3-218ENST00000493430 CENPWQ5EE01 88 aa1.78□□□□□ -2.12
PTCD3-218ENST00000493430 SAMD13Q5VXD3 122 aa1.78□□□□□ -2.12
PTCD3-218ENST00000493430 NTM-AS1Q6ZSK4 140 aa1.78□□□□□ -2.12
PTCD3-218ENST00000493430 SCXQ7RTU7 201 aa1.78□□□□□ -2.12
PTCD3-218ENST00000493430 LYPD1Q8N2G4 141 aa1.78□□□□□ -2.12
PTCD3-218ENST00000493430 UBE2WQ96B02 151 aa1.78□□□□□ -2.12
PTCD3-218ENST00000493430 RPL39LQ96EH5 51 aaKnown RBP1.78□□□□□ -2.12
PTCD3-218ENST00000493430 FAM210BQ96KR6 192 aa1.78□□□□□ -2.12
PTCD3-218ENST00000493430 PSMG3Q9BT73 122 aaPredicted RBP1.78□□□□□ -2.12
PTCD3-218ENST00000493430 CACFD1Q9UGQ2 172 aa1.78□□□□□ -2.12
PTCD3-218ENST00000493430 LY96Q9Y6Y9 160 aa1.78□□□□□ -2.12
PTCD3-218ENST00000493430 FAT3Q8TDW7 4589 aa1.78□□□□□ -2.12
PTCD3-218ENST00000493430 RBAKDNA6NC62 111 aa1.77□□□□□ -2.13
PTCD3-218ENST00000493430 SMKR1H3BMG3 65 aa1.77□□□□□ -2.13
PTCD3-218ENST00000493430 PSCAO43653 123 aa1.77□□□□□ -2.13
PTCD3-218ENST00000493430 NCR2O95944 276 aa1.77□□□□□ -2.13
PTCD3-218ENST00000493430 CXorf1O96002 111 aa1.77□□□□□ -2.13
PTCD3-218ENST00000493430 PFN1P07737 140 aaKnown RBP1.77□□□□□ -2.13
PTCD3-218ENST00000493430 MGST1P10620 155 aaKnown RBP1.77□□□□□ -2.13
PTCD3-218ENST00000493430 ASIPP42127 132 aa1.77□□□□□ -2.13
PTCD3-218ENST00000493430 CEBPGP53567 150 aa1.77□□□□□ -2.13
PTCD3-218ENST00000493430 TAS2R45P59539 299 aa1.77□□□□□ -2.13
PTCD3-218ENST00000493430 TDRG1Q3Y452 100 aa1.77□□□□□ -2.13
PTCD3-218ENST00000493430 RNASE13Q5GAN3 156 aaKnown RBP1.77□□□□□ -2.13
PTCD3-218ENST00000493430 TTC32Q5I0X7 151 aa1.77□□□□□ -2.13
PTCD3-218ENST00000493430 AKR1C8PQ5T2L2 129 aa1.77□□□□□ -2.13
PTCD3-218ENST00000493430 KCNRGQ8N5I3 272 aa1.77□□□□□ -2.13
PTCD3-218ENST00000493430 Q8N814 137 aa1.77□□□□□ -2.13
PTCD3-218ENST00000493430 ATP6V0E2Q8NHE4 81 aa1.77□□□□□ -2.13
PTCD3-218ENST00000493430 SUN5Q8TC36 379 aa1.77□□□□□ -2.13
PTCD3-218ENST00000493430 SFT2D1Q8WV19 159 aa1.77□□□□□ -2.13
PTCD3-218ENST00000493430 ISOC2Q96AB3 205 aa1.77□□□□□ -2.13
PTCD3-218ENST00000493430 C18orf15Q96N68 181 aa1.77□□□□□ -2.13
PTCD3-218ENST00000493430 RNASE7Q9H1E1 156 aaKnown RBP1.77□□□□□ -2.13
PTCD3-218ENST00000493430 KCNIP2Q9NS61 270 aa1.77□□□□□ -2.13
PTCD3-218ENST00000493430 GNG13Q9P2W3 67 aa1.77□□□□□ -2.13
PTCD3-218ENST00000493430 IGLV4-60A0A075B6I1 120 aa1.76□□□□□ -2.13
PTCD3-218ENST00000493430 PIGBOS1A0A0B4J2F0 54 aa1.76□□□□□ -2.13
PTCD3-218ENST00000493430 IBA57-AS1B1ANH7 110 aa1.76□□□□□ -2.13
PTCD3-218ENST00000493430 H3BNG1 76 aa1.76□□□□□ -2.13
PTCD3-218ENST00000493430 K7EN84 100 aa1.76□□□□□ -2.13
PTCD3-218ENST00000493430 LTAP01374 205 aa1.76□□□□□ -2.13
PTCD3-218ENST00000493430 PET100P0DJ07 73 aa1.76□□□□□ -2.13
PTCD3-218ENST00000493430 TPT1P13693 172 aaKnown RBP1.76□□□□□ -2.13
PTCD3-218ENST00000493430 EVI2AP22794 236 aa1.76□□□□□ -2.13
PTCD3-218ENST00000493430 S100A4P26447 101 aaKnown RBP1.76□□□□□ -2.13
PTCD3-218ENST00000493430 RPL35P42766 123 aaKnown RBP1.76□□□□□ -2.13
PTCD3-218ENST00000493430 UBE2D3P61077 147 aa1.76□□□□□ -2.13
PTCD3-218ENST00000493430 UBE2G1P62253 170 aa1.76□□□□□ -2.13
PTCD3-218ENST00000493430 UBE2D2P62837 147 aa1.76□□□□□ -2.13
PTCD3-218ENST00000493430 RHOHQ15669 191 aa1.76□□□□□ -2.13
PTCD3-218ENST00000493430 RGS21Q2M5E4 152 aa1.76□□□□□ -2.13
PTCD3-218ENST00000493430 KRTAP26-1Q6PEX3 210 aa1.76□□□□□ -2.13
PTCD3-218ENST00000493430 ENHOQ6UWT2 76 aa1.76□□□□□ -2.13
PTCD3-218ENST00000493430 ALKAL2Q6UX46 152 aa1.76□□□□□ -2.13
PTCD3-218ENST00000493430 NIT1Q86X76 327 aa1.76□□□□□ -2.13
PTCD3-218ENST00000493430 NKAPP1Q8N9T2 125 aa1.76□□□□□ -2.13
PTCD3-218ENST00000493430 STOML3Q8TAV4 291 aa1.76□□□□□ -2.13
PTCD3-218ENST00000493430 NDFIP1Q9BT67 221 aa1.76□□□□□ -2.13
PTCD3-218ENST00000493430 PHLDA3Q9Y5J5 127 aa1.76□□□□□ -2.13
PTCD3-218ENST00000493430 SRRM2Q9UQ35 2752 aaKnown RBP1.76□□□□□ -2.13
PTCD3-218ENST00000493430 HERC1Q15751 4861 aa1.75□□□□□ -2.13
PTCD3-218ENST00000493430 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.75□□□□□ -2.13
PTCD3-218ENST00000493430 BORCS7-ASMTA0A0B4J1R7 106 aa1.75□□□□□ -2.13
PTCD3-218ENST00000493430 TRBV6-4A0A1B0GX49 114 aa1.75□□□□□ -2.13
PTCD3-218ENST00000493430 A0A1W2PRE2 83 aa1.75□□□□□ -2.13
PTCD3-218ENST00000493430 IGKV2-29A2NJV5 120 aaPredicted RBP1.75□□□□□ -2.13
PTCD3-218ENST00000493430 A6NDN8 102 aa1.75□□□□□ -2.13
PTCD3-218ENST00000493430 FABP5P3A8MUU1 101 aa1.75□□□□□ -2.13
PTCD3-218ENST00000493430 C9JQL5 133 aa1.75□□□□□ -2.13
PTCD3-218ENST00000493430 TAAR5O14804 337 aa1.75□□□□□ -2.13
PTCD3-218ENST00000493430 PFDN1O60925 122 aa1.75□□□□□ -2.13
PTCD3-218ENST00000493430 NMBP08949 121 aa1.75□□□□□ -2.13
PTCD3-218ENST00000493430 IGLC6P0CF74 106 aa1.75□□□□□ -2.13
PTCD3-218ENST00000493430 S100A7P31151 101 aa1.75□□□□□ -2.13
PTCD3-218ENST00000493430 RPS10P46783 165 aaKnown RBP1.75□□□□□ -2.13
PTCD3-218ENST00000493430 LINC01556Q5JQF7 62 aa1.75□□□□□ -2.13
PTCD3-218ENST00000493430 FAM162BQ5T6X4 162 aa1.75□□□□□ -2.13
PTCD3-218ENST00000493430 LELP1Q5T871 98 aa1.75□□□□□ -2.13
PTCD3-218ENST00000493430 LINC00299Q6ZSB3 139 aa1.75□□□□□ -2.13
PTCD3-218ENST00000493430 C9orf62Q8N4C0 152 aa1.75□□□□□ -2.13
PTCD3-218ENST00000493430 C20orf203Q8NBC4 194 aa1.75□□□□□ -2.13
PTCD3-218ENST00000493430 OR2D3Q8NGH3 330 aa1.75□□□□□ -2.13
PTCD3-218ENST00000493430 CIRBP-AS1Q8TBR5 109 aa1.75□□□□□ -2.13
PTCD3-218ENST00000493430 SFRP2Q96HF1 295 aa1.75□□□□□ -2.13
PTCD3-218ENST00000493430 KCNS1Q96KK3 526 aa1.75□□□□□ -2.13
PTCD3-218ENST00000493430 TXNDC17Q9BRA2 123 aa1.75□□□□□ -2.13
PTCD3-218ENST00000493430 MAP1LC3CQ9BXW4 147 aa1.75□□□□□ -2.13
PTCD3-218ENST00000493430 GTSF1LQ9H1H1 148 aa1.75□□□□□ -2.13
PTCD3-218ENST00000493430 TMEM167BQ9NRX6 74 aa1.75□□□□□ -2.13
PTCD3-218ENST00000493430 IL36BQ9NZH7 164 aa1.75□□□□□ -2.13
PTCD3-218ENST00000493430 LENEPQ9Y5L5 61 aa1.75□□□□□ -2.13
PTCD3-218ENST00000493430 TRAV8-6A0A0B4J262 113 aa1.74□□□□□ -2.13
PTCD3-218ENST00000493430 IGKV2-24A0A0C4DH68 120 aa1.74□□□□□ -2.13
PTCD3-218ENST00000493430 KANTRA0A1W2PQU2 76 aa1.74□□□□□ -2.13
PTCD3-218ENST00000493430 C19orf71A6NCJ1 209 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms