RNA–Protein interactions for RNA: ENST00000491952.1

TTC3-222, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 247 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-222ENST00000491952 HSPB11Q9Y547 144 aa-2□□□□□ -2.73
TTC3-222ENST00000491952 V9GYH0 126 aa-2□□□□□ -2.73
TTC3-222ENST00000491952 V9GYQ6 96 aa-2□□□□□ -2.73
TTC3-222ENST00000491952 TMEM2Q9UHN6 1383 aa-2□□□□□ -2.73
TTC3-222ENST00000491952 DNAH3Q8TD57 4116 aa-2.01□□□□□ -2.73
TTC3-222ENST00000491952 ANKHD1Q8IWZ3 2542 aaKnown RBP-2.01□□□□□ -2.73
TTC3-222ENST00000491952 SIX6O95475 246 aa-2.01□□□□□ -2.73
TTC3-222ENST00000491952 DEFB135Q30KP9 77 aa-2.01□□□□□ -2.73
TTC3-222ENST00000491952 CDK5RAP2Q96SN8 1893 aa-2.01□□□□□ -2.73
TTC3-222ENST00000491952 PI4KAP42356 2102 aa-2.02□□□□□ -2.73
TTC3-222ENST00000491952 NWD2Q9ULI1 1742 aa-2.02□□□□□ -2.73
TTC3-222ENST00000491952 HCG22E2RYF7 251 aa-2.02□□□□□ -2.73
TTC3-222ENST00000491952 NDUFB6O95139 128 aa-2.02□□□□□ -2.73
TTC3-222ENST00000491952 COX17Q14061 63 aa-2.02□□□□□ -2.73
TTC3-222ENST00000491952 MORN2Q502X0 79 aa-2.02□□□□□ -2.73
TTC3-222ENST00000491952 C10orf128Q5T292 105 aa-2.02□□□□□ -2.73
TTC3-222ENST00000491952 PKHD1L1Q86WI1 4243 aa-2.02□□□□□ -2.73
TTC3-222ENST00000491952 GAPVD1Q14C86 1478 aa-2.02□□□□□ -2.73
TTC3-222ENST00000491952 FAT3Q8TDW7 4589 aa-2.02□□□□□ -2.73
TTC3-222ENST00000491952 GOLGA4Q13439 2230 aaKnown RBP-2.03□□□□□ -2.73
TTC3-222ENST00000491952 HIST1H1AQ02539 215 aaPredicted RBP-2.03□□□□□ -2.73
TTC3-222ENST00000491952 AIF1LQ9BQI0 150 aa-2.03□□□□□ -2.73
TTC3-222ENST00000491952 DBIP07108 87 aaKnown RBP-2.04□□□□□ -2.74
TTC3-222ENST00000491952 LINC00694P0DN24 101 aa-2.04□□□□□ -2.74
TTC3-222ENST00000491952 Q6AWC8 147 aa-2.04□□□□□ -2.74
TTC3-222ENST00000491952 LENEPQ9Y5L5 61 aa-2.04□□□□□ -2.74
TTC3-222ENST00000491952 LAMA2P24043 3122 aaKnown RBP-2.04□□□□□ -2.74
TTC3-222ENST00000491952 IFT140Q96RY7 1462 aa-2.05□□□□□ -2.74
TTC3-222ENST00000491952 VPS13DQ5THJ4 4388 aa-2.05□□□□□ -2.74
TTC3-222ENST00000491952 PKD1P98161 4303 aa-2.05□□□□□ -2.74
TTC3-222ENST00000491952 NSD3Q9BZ95 1437 aa-2.05□□□□□ -2.74
TTC3-222ENST00000491952 MYH6P13533 1939 aa-2.05□□□□□ -2.74
TTC3-222ENST00000491952 SBF2Q86WG5 1849 aa-2.05□□□□□ -2.74
TTC3-222ENST00000491952 KIF21AQ7Z4S6 1674 aa-2.06□□□□□ -2.74
TTC3-222ENST00000491952 SPAARA0A1B0GVQ0 90 aa-2.06□□□□□ -2.74
TTC3-222ENST00000491952 SMIM15Q7Z3B0 74 aa-2.06□□□□□ -2.74
TTC3-222ENST00000491952 BAGE2Q86Y30 109 aa-2.06□□□□□ -2.74
TTC3-222ENST00000491952 POLA1P09884 1462 aaPredicted RBP-2.07□□□□□ -2.74
TTC3-222ENST00000491952 TRAV13-2A0A0B4J235 113 aa-2.07□□□□□ -2.74
TTC3-222ENST00000491952 NBEAP1P0C6P0 100 aa-2.07□□□□□ -2.74
TTC3-222ENST00000491952 TTC9CQ8N5M4 171 aa-2.07□□□□□ -2.74
TTC3-222ENST00000491952 AQP10Q96PS8 301 aa-2.07□□□□□ -2.74
TTC3-222ENST00000491952 OVOS2A0A0J9YW53 1432 aa-2.08□□□□□ -2.74
TTC3-222ENST00000491952 OVOS2Q6IE36 1432 aa-2.08□□□□□ -2.74
TTC3-222ENST00000491952 ALX1Q15699 326 aa-2.08□□□□□ -2.74
TTC3-222ENST00000491952 APLNQ9ULZ1 77 aa-2.08□□□□□ -2.74
TTC3-222ENST00000491952 F8VRH5 84 aa-2.09□□□□□ -2.74
TTC3-222ENST00000491952 UQCR11O14957 56 aa-2.09□□□□□ -2.74
TTC3-222ENST00000491952 DEFB112Q30KQ8 113 aa-2.09□□□□□ -2.74
TTC3-222ENST00000491952 SMIM3Q9BZL3 60 aa-2.09□□□□□ -2.74
TTC3-222ENST00000491952 SPANXCQ9NY87 97 aa-2.09□□□□□ -2.74
TTC3-222ENST00000491952 DISP2A7MBM2 1401 aa-2.09□□□□□ -2.74
TTC3-222ENST00000491952 SPTBN4Q9H254 2564 aa-2.09□□□□□ -2.74
TTC3-222ENST00000491952 ARHGEF12Q9NZN5 1544 aa-2.1□□□□□ -2.75
TTC3-222ENST00000491952 ZNF518AQ6AHZ1 1483 aa-2.1□□□□□ -2.75
TTC3-222ENST00000491952 LAMA1P25391 3075 aa-2.1□□□□□ -2.75
TTC3-222ENST00000491952 ARAP2Q8WZ64 1704 aa-2.11□□□□□ -2.75
TTC3-222ENST00000491952 SONP18583 2426 aaKnown RBP-2.11□□□□□ -2.75
TTC3-222ENST00000491952 SYS1-DBNDD2H3BUS1 97 aa-2.11□□□□□ -2.75
TTC3-222ENST00000491952 TSPAN19P0C672 248 aa-2.11□□□□□ -2.75
TTC3-222ENST00000491952 SPG11Q96JI7 2443 aa-2.11□□□□□ -2.75
TTC3-222ENST00000491952 TULP4Q9NRJ4 1543 aa-2.12□□□□□ -2.75
TTC3-222ENST00000491952 LINC00959A0A1B0GUT2 108 aa-2.12□□□□□ -2.75
TTC3-222ENST00000491952 IGLC7A0M8Q6 106 aa-2.12□□□□□ -2.75
TTC3-222ENST00000491952 APOC3P02656 99 aa-2.12□□□□□ -2.75
TTC3-222ENST00000491952 NEFHP12036 1026 aa-2.12□□□□□ -2.75
TTC3-222ENST00000491952 SCIMPQ6UWF3 145 aa-2.12□□□□□ -2.75
TTC3-222ENST00000491952 NDUFA4L2Q9NRX3 87 aa-2.12□□□□□ -2.75
TTC3-222ENST00000491952 PRG4Q92954 1404 aaPredicted RBP-2.12□□□□□ -2.75
TTC3-222ENST00000491952 HMGXB3Q12766 1538 aa-2.12□□□□□ -2.75
TTC3-222ENST00000491952 TRBV7-4A0A0J9YYF1 115 aa-2.13□□□□□ -2.75
TTC3-222ENST00000491952 K7ERU9 68 aa-2.13□□□□□ -2.75
TTC3-222ENST00000491952 TAC4Q86UU9 113 aa-2.13□□□□□ -2.75
TTC3-222ENST00000491952 LINC01558Q9Y6Z2 57 aa-2.13□□□□□ -2.75
TTC3-222ENST00000491952 TEP1Q99973 2627 aaKnown RBP-2.14□□□□□ -2.75
TTC3-222ENST00000491952 PPIP5K1Q6PFW1 1433 aa-2.14□□□□□ -2.75
TTC3-222ENST00000491952 TNRC18O15417 2968 aaPredicted RBP-2.14□□□□□ -2.75
TTC3-222ENST00000491952 J3QR89 54 aa-2.14□□□□□ -2.75
TTC3-222ENST00000491952 TPPP2P59282 170 aa-2.14□□□□□ -2.75
TTC3-222ENST00000491952 MAFIPQ8WZ33 124 aa-2.14□□□□□ -2.75
TTC3-222ENST00000491952 SPRR2FQ96RM1 72 aa-2.14□□□□□ -2.75
TTC3-222ENST00000491952 KIAA0556O60303 1618 aa-2.14□□□□□ -2.75
TTC3-222ENST00000491952 RIMS1Q86UR5 1692 aaKnown RBP-2.15□□□□□ -2.75
TTC3-222ENST00000491952 AKAP9Q99996 3911 aa-2.15□□□□□ -2.75
TTC3-222ENST00000491952 GNG14A0A1W2PPG7 69 aa-2.15□□□□□ -2.75
TTC3-222ENST00000491952 NCR2O95944 276 aa-2.15□□□□□ -2.75
TTC3-222ENST00000491952 KCNRGQ8N5I3 272 aa-2.15□□□□□ -2.75
TTC3-222ENST00000491952 PATJQ8NI35 1801 aa-2.15□□□□□ -2.75
TTC3-222ENST00000491952 COX8AP10176 69 aa-2.16□□□□□ -2.76
TTC3-222ENST00000491952 SPANXA1Q9NS26 97 aa-2.16□□□□□ -2.76
TTC3-222ENST00000491952 SHANK2Q9UPX8 1470 aa-2.16□□□□□ -2.76
TTC3-222ENST00000491952 CPSF4LA6NMK7 179 aaKnown RBP-2.17□□□□□ -2.76
TTC3-222ENST00000491952 M0R2Z0 102 aa-2.17□□□□□ -2.76
TTC3-222ENST00000491952 GUCA1AP43080 201 aaPredicted RBP-2.17□□□□□ -2.76
TTC3-222ENST00000491952 TSLPQ969D9 159 aa-2.17□□□□□ -2.76
TTC3-222ENST00000491952 DOCK2Q92608 1830 aa-2.17□□□□□ -2.76
TTC3-222ENST00000491952 SPEF2Q9C093 1822 aa-2.17□□□□□ -2.76
TTC3-222ENST00000491952 DYNLRB1Q9NP97 96 aa-2.18□□□□□ -2.76
TTC3-222ENST00000491952 DNAH9Q9NYC9 4486 aa-2.19□□□□□ -2.76
TTC3-222ENST00000491952 FMN2Q9NZ56 1722 aa-2.19□□□□□ -2.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms