RNA–Protein interactions for RNA: ENST00000491922.1

CCDC6-202, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 2,642 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-202ENST00000491922 A0A087WVE0 104 aa4.67□□□□□ -1.66
CCDC6-202ENST00000491922 TRBV12-3P01733 135 aa4.67□□□□□ -1.66
CCDC6-202ENST00000491922 IGHG2P01859 326 aa4.67□□□□□ -1.66
CCDC6-202ENST00000491922 USMG5Q96IX5 58 aa4.67□□□□□ -1.66
CCDC6-202ENST00000491922 C14orf132Q9NPU4 83 aa4.67□□□□□ -1.66
CCDC6-202ENST00000491922 LINC00846Q9NV44 126 aa4.67□□□□□ -1.66
CCDC6-202ENST00000491922 PKIGQ9Y2B9 76 aa4.67□□□□□ -1.66
CCDC6-202ENST00000491922 HELZ2Q9BYK8 2649 aaKnown RBP4.67□□□□□ -1.66
CCDC6-202ENST00000491922 A0A1W2PRX2 142 aa4.67□□□□□ -1.66
CCDC6-202ENST00000491922 FHL2Q14192 279 aa4.67□□□□□ -1.66
CCDC6-202ENST00000491922 S100A7L2Q5SY68 101 aa4.67□□□□□ -1.66
CCDC6-202ENST00000491922 RP1L1Q8IWN7 2480 aaPredicted RBP4.67□□□□□ -1.66
CCDC6-202ENST00000491922 PIEZO2Q9H5I5 2752 aa4.67□□□□□ -1.66
CCDC6-202ENST00000491922 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.66□□□□□ -1.66
CCDC6-202ENST00000491922 A0A0U1RRA0 63 aa4.66□□□□□ -1.66
CCDC6-202ENST00000491922 IGKV2-29A2NJV5 120 aaPredicted RBP4.66□□□□□ -1.66
CCDC6-202ENST00000491922 H3BUA1 57 aa4.66□□□□□ -1.66
CCDC6-202ENST00000491922 LY6HO94772 140 aa4.66□□□□□ -1.66
CCDC6-202ENST00000491922 CRPP02741 224 aa4.66□□□□□ -1.66
CCDC6-202ENST00000491922 ATP5EP2Q5VTU8 51 aa4.66□□□□□ -1.66
CCDC6-202ENST00000491922 C10orf105Q8TEF2 133 aa4.66□□□□□ -1.66
CCDC6-202ENST00000491922 MOB4Q9Y3A3 225 aa4.66□□□□□ -1.66
CCDC6-202ENST00000491922 TRAV12-2A0A075B6T6 113 aa4.66□□□□□ -1.66
CCDC6-202ENST00000491922 H0YGX0 51 aa4.66□□□□□ -1.66
CCDC6-202ENST00000491922 PLA2G2AP14555 144 aa4.66□□□□□ -1.66
CCDC6-202ENST00000491922 PSMB8P28062 276 aa4.66□□□□□ -1.66
CCDC6-202ENST00000491922 PFN2P35080 140 aa4.66□□□□□ -1.66
CCDC6-202ENST00000491922 SAA4P35542 130 aa4.66□□□□□ -1.66
CCDC6-202ENST00000491922 ZNF625Q96I27 306 aaPredicted RBP4.66□□□□□ -1.66
CCDC6-202ENST00000491922 LINC00467Q9BRT7 94 aa4.66□□□□□ -1.66
CCDC6-202ENST00000491922 FAM236DA0A1B0GTK5 79 aa4.65□□□□□ -1.66
CCDC6-202ENST00000491922 RBMY1BA6NDE4 496 aaKnown RBP4.65□□□□□ -1.66
CCDC6-202ENST00000491922 RBMY1EA6NEQ0 496 aaKnown RBP4.65□□□□□ -1.66
CCDC6-202ENST00000491922 EPM2AB3EWF7 344 aa4.65□□□□□ -1.66
CCDC6-202ENST00000491922 RBMY1DP0C7P1 496 aaKnown RBP4.65□□□□□ -1.66
CCDC6-202ENST00000491922 RBMY1A1P0DJD3 496 aaKnown RBP4.65□□□□□ -1.66
CCDC6-202ENST00000491922 RBMY1CP0DJD4 496 aa4.65□□□□□ -1.66
CCDC6-202ENST00000491922 FAM236CP0DP71 79 aa4.65□□□□□ -1.66
CCDC6-202ENST00000491922 RBMY1FQ15415 496 aaKnown RBP4.65□□□□□ -1.66
CCDC6-202ENST00000491922 FAM19A3Q7Z5A8 133 aa4.65□□□□□ -1.66
CCDC6-202ENST00000491922 TMEM243Q9BU79 118 aa4.65□□□□□ -1.66
CCDC6-202ENST00000491922 SERP1Q9Y6X1 66 aa4.65□□□□□ -1.66
CCDC6-202ENST00000491922 K7EMT4 169 aa4.65□□□□□ -1.67
CCDC6-202ENST00000491922 GHRHP01286 108 aa4.65□□□□□ -1.67
CCDC6-202ENST00000491922 ZFP36P26651 326 aaKnown RBP4.65□□□□□ -1.67
CCDC6-202ENST00000491922 HOXD3P31249 432 aaPredicted RBP4.65□□□□□ -1.67
CCDC6-202ENST00000491922 DGAT2L7PQ6IED9 249 aa4.65□□□□□ -1.67
CCDC6-202ENST00000491922 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.65□□□□□ -1.67
CCDC6-202ENST00000491922 IGHV3-73A0A0B4J1V6 119 aa4.64□□□□□ -1.67
CCDC6-202ENST00000491922 SMIM1B2RUZ4 78 aa4.64□□□□□ -1.67
CCDC6-202ENST00000491922 COX6A2Q02221 97 aa4.64□□□□□ -1.67
CCDC6-202ENST00000491922 C6orf226Q5I0X4 101 aa4.64□□□□□ -1.67
CCDC6-202ENST00000491922 BBC3Q96PG8 261 aaPredicted RBP4.64□□□□□ -1.67
CCDC6-202ENST00000491922 A0A087WYN8 130 aa4.64□□□□□ -1.67
CCDC6-202ENST00000491922 IGHV3-11P01762 117 aa4.64□□□□□ -1.67
CCDC6-202ENST00000491922 SNRPD3P62318 126 aaKnown RBP4.64□□□□□ -1.67
CCDC6-202ENST00000491922 SPINK13Q1W4C9 94 aa4.64□□□□□ -1.67
CCDC6-202ENST00000491922 PIK3CD-AS1Q5SR53 167 aa4.64□□□□□ -1.67
CCDC6-202ENST00000491922 LINC00242Q5T6M2 205 aa4.64□□□□□ -1.67
CCDC6-202ENST00000491922 C1orf195Q5TG92 126 aa4.64□□□□□ -1.67
CCDC6-202ENST00000491922 LINC00336Q6ZUF6 198 aa4.64□□□□□ -1.67
CCDC6-202ENST00000491922 IGHV3OR16-12A0A075B7B8 117 aa4.63□□□□□ -1.67
CCDC6-202ENST00000491922 IGKV3-20P01619 116 aa4.63□□□□□ -1.67
CCDC6-202ENST00000491922 CCKP06307 115 aa4.63□□□□□ -1.67
CCDC6-202ENST00000491922 PROK1P58294 105 aa4.63□□□□□ -1.67
CCDC6-202ENST00000491922 C9orf129Q5T035 196 aaKnown RBP4.63□□□□□ -1.67
CCDC6-202ENST00000491922 LINC01560Q8TB33 94 aa4.63□□□□□ -1.67
CCDC6-202ENST00000491922 CEP295Q9C0D2 2601 aa4.63□□□□□ -1.67
CCDC6-202ENST00000491922 LOC400499M0QZD8 3231 aa4.63□□□□□ -1.67
CCDC6-202ENST00000491922 J3QKU1 62 aa4.63□□□□□ -1.67
CCDC6-202ENST00000491922 CNOT1A5YKK6 2376 aaKnown RBP4.63□□□□□ -1.67
CCDC6-202ENST00000491922 TRBV10-3A0A0K0K1G6 114 aa4.62□□□□□ -1.67
CCDC6-202ENST00000491922 BCE1O60756 84 aa4.62□□□□□ -1.67
CCDC6-202ENST00000491922 XCL1P47992 114 aa4.62□□□□□ -1.67
CCDC6-202ENST00000491922 LINC00337Q8N6G1 96 aa4.62□□□□□ -1.67
CCDC6-202ENST00000491922 SMIM11BQ8TCY0 68 aa4.62□□□□□ -1.67
CCDC6-202ENST00000491922 XCL2Q9UBD3 114 aa4.62□□□□□ -1.67
CCDC6-202ENST00000491922 NCR3O14931 201 aa4.62□□□□□ -1.67
CCDC6-202ENST00000491922 C20orf197Q8N268 126 aa4.62□□□□□ -1.67
CCDC6-202ENST00000491922 SND1-IT1Q9HBX3 110 aa4.62□□□□□ -1.67
CCDC6-202ENST00000491922 MED13LQ71F56 2210 aa4.62□□□□□ -1.67
CCDC6-202ENST00000491922 IGF2RP11717 2491 aa4.62□□□□□ -1.67
CCDC6-202ENST00000491922 IGKV2-28A0A075B6P5 120 aa4.61□□□□□ -1.67
CCDC6-202ENST00000491922 TRAV23DV6A0A075B6W5 121 aa4.61□□□□□ -1.67
CCDC6-202ENST00000491922 LECT2O14960 151 aa4.61□□□□□ -1.67
CCDC6-202ENST00000491922 IGKV2D-28P01615 120 aa4.61□□□□□ -1.67
CCDC6-202ENST00000491922 C11orf71Q6IPW1 123 aa4.61□□□□□ -1.67
CCDC6-202ENST00000491922 LYPD5Q6UWN5 251 aa4.61□□□□□ -1.67
CCDC6-202ENST00000491922 ORMDL1Q9P0S3 153 aa4.61□□□□□ -1.67
CCDC6-202ENST00000491922 PCNX1Q96RV3 2341 aa4.61□□□□□ -1.67
CCDC6-202ENST00000491922 IGHV3-38A0A0C4DH36 116 aa4.61□□□□□ -1.67
CCDC6-202ENST00000491922 K7EQG2 157 aa4.61□□□□□ -1.67
CCDC6-202ENST00000491922 IGHV3-53P01767 116 aa4.61□□□□□ -1.67
CCDC6-202ENST00000491922 HILS1P60008 231 aa4.61□□□□□ -1.67
CCDC6-202ENST00000491922 SMIM26A0A096LP01 95 aa4.6□□□□□ -1.67
CCDC6-202ENST00000491922 KNCNA6PVL3 124 aa4.6□□□□□ -1.67
CCDC6-202ENST00000491922 JMJD7-PLA2G4BH0Y9G9 81 aa4.6□□□□□ -1.67
CCDC6-202ENST00000491922 Q6ZSN1 163 aa4.6□□□□□ -1.67
CCDC6-202ENST00000491922 CSMD1Q96PZ7 3565 aa4.6□□□□□ -1.67
CCDC6-202ENST00000491922 TRAV7A0A075B6U4 112 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms