RNA–Protein interactions for RNA: ENST00000490999.5

SCAMP3-208, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 1,011 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-208ENST00000490999 EIF5A2Q9GZV4 153 aaKnown RBP9.32□□□□□ -0.92
SCAMP3-208ENST00000490999 PKIGQ9Y2B9 76 aa9.32□□□□□ -0.92
SCAMP3-208ENST00000490999 IGHV1-58A0A0C4DH39 117 aa9.31□□□□□ -0.92
SCAMP3-208ENST00000490999 A0A0U1RQV1 116 aa9.31□□□□□ -0.92
SCAMP3-208ENST00000490999 FGF6P10767 208 aa9.31□□□□□ -0.92
SCAMP3-208ENST00000490999 CTRLP40313 264 aa9.31□□□□□ -0.92
SCAMP3-208ENST00000490999 SYCNQ0VAF6 134 aa9.31□□□□□ -0.92
SCAMP3-208ENST00000490999 RNASE7Q9H1E1 156 aaKnown RBP9.31□□□□□ -0.92
SCAMP3-208ENST00000490999 A8MWL6 223 aa9.3□□□□□ -0.92
SCAMP3-208ENST00000490999 GATCO43716 136 aaKnown RBP9.3□□□□□ -0.92
SCAMP3-208ENST00000490999 PHF5AQ7RTV0 110 aaKnown RBP9.3□□□□□ -0.92
SCAMP3-208ENST00000490999 APCSP02743 223 aa9.29□□□□□ -0.92
SCAMP3-208ENST00000490999 CAMPP49913 170 aa9.29□□□□□ -0.92
SCAMP3-208ENST00000490999 CT83Q5H943 113 aa9.29□□□□□ -0.92
SCAMP3-208ENST00000490999 RPL39LQ96EH5 51 aaKnown RBP9.29□□□□□ -0.92
SCAMP3-208ENST00000490999 SMIM7Q9BQ49 75 aa9.29□□□□□ -0.92
SCAMP3-208ENST00000490999 LOC107984640A0A0U1RRK4 108 aa9.28□□□□□ -0.92
SCAMP3-208ENST00000490999 ZNF561-AS1K7EIQ3 104 aa9.28□□□□□ -0.92
SCAMP3-208ENST00000490999 CEBPGP53567 150 aa9.28□□□□□ -0.92
SCAMP3-208ENST00000490999 TWIST1Q15672 202 aa9.28□□□□□ -0.92
SCAMP3-208ENST00000490999 C9orf116Q5BN46 136 aaPredicted RBP9.28□□□□□ -0.92
SCAMP3-208ENST00000490999 SMIM15Q7Z3B0 74 aa9.28□□□□□ -0.92
SCAMP3-208ENST00000490999 GATD1Q8NB37 220 aa9.28□□□□□ -0.92
SCAMP3-208ENST00000490999 OR5A1Q8NGJ0 315 aa9.28□□□□□ -0.92
SCAMP3-208ENST00000490999 LINC00959A0A1B0GUT2 108 aa9.27□□□□□ -0.93
SCAMP3-208ENST00000490999 FOXA3P55318 350 aaPredicted RBP9.27□□□□□ -0.93
SCAMP3-208ENST00000490999 IGLV4-69A0A075B6H9 119 aa9.26□□□□□ -0.93
SCAMP3-208ENST00000490999 ZNF727A8MUV8 499 aa9.26□□□□□ -0.93
SCAMP3-208ENST00000490999 SRP19P09132 144 aaKnown RBP9.26□□□□□ -0.93
SCAMP3-208ENST00000490999 RPL18AQ02543 176 aaKnown RBP9.26□□□□□ -0.93
SCAMP3-208ENST00000490999 FAM74A3Q4VXF1 159 aa9.26□□□□□ -0.93
SCAMP3-208ENST00000490999 LCE2AQ5TA79 106 aaPredicted RBP9.26□□□□□ -0.93
SCAMP3-208ENST00000490999 TEX261Q6UWH6 196 aa9.26□□□□□ -0.93
SCAMP3-208ENST00000490999 LINC01551Q86U37 167 aa9.25□□□□□ -0.93
SCAMP3-208ENST00000490999 DIRC1Q969H9 104 aa9.25□□□□□ -0.93
SCAMP3-208ENST00000490999 SMDT1Q9H4I9 107 aa9.25□□□□□ -0.93
SCAMP3-208ENST00000490999 OSTCQ9NRP0 149 aa9.25□□□□□ -0.93
SCAMP3-208ENST00000490999 H0Y9J4 135 aa9.24□□□□□ -0.93
SCAMP3-208ENST00000490999 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.24□□□□□ -0.93
SCAMP3-208ENST00000490999 IGLV7-43P04211 117 aa9.24□□□□□ -0.93
SCAMP3-208ENST00000490999 KRTAP11-1Q8IUC1 163 aa9.24□□□□□ -0.93
SCAMP3-208ENST00000490999 SDHAF1A6NFY7 115 aa9.23□□□□□ -0.93
SCAMP3-208ENST00000490999 APOMO95445 188 aa9.23□□□□□ -0.93
SCAMP3-208ENST00000490999 NCR2O95944 276 aa9.23□□□□□ -0.93
SCAMP3-208ENST00000490999 ZNF25P17030 456 aaPredicted RBP9.23□□□□□ -0.93
SCAMP3-208ENST00000490999 TMEM241Q24JQ0 296 aa9.23□□□□□ -0.93
SCAMP3-208ENST00000490999 NUP35Q8NFH5 326 aa9.23□□□□□ -0.93
SCAMP3-208ENST00000490999 TSKUQ8WUA8 353 aa9.23□□□□□ -0.93
SCAMP3-208ENST00000490999 BORCS7Q96B45 105 aa9.23□□□□□ -0.93
SCAMP3-208ENST00000490999 TMEM101Q96IK0 257 aa9.23□□□□□ -0.93
SCAMP3-208ENST00000490999 BTF3L4Q96K17 158 aa9.23□□□□□ -0.93
SCAMP3-208ENST00000490999 H7C423 109 aa9.22□□□□□ -0.93
SCAMP3-208ENST00000490999 KRTAP1-4P0C5Y4 121 aa9.22□□□□□ -0.93
SCAMP3-208ENST00000490999 PEA15Q15121 130 aa9.22□□□□□ -0.93
SCAMP3-208ENST00000490999 CD164L2Q6UWJ8 174 aa9.22□□□□□ -0.93
SCAMP3-208ENST00000490999 ISOC2Q96AB3 205 aa9.22□□□□□ -0.93
SCAMP3-208ENST00000490999 CAMK2N2Q96S95 79 aa9.22□□□□□ -0.93
SCAMP3-208ENST00000490999 A0A1B0GUT8 65 aa9.21□□□□□ -0.94
SCAMP3-208ENST00000490999 SS18Q15532 418 aa9.21□□□□□ -0.94
SCAMP3-208ENST00000490999 OPRPNQ99935 248 aaPredicted RBP9.21□□□□□ -0.94
SCAMP3-208ENST00000490999 TMEM242Q9NWH2 141 aa9.21□□□□□ -0.94
SCAMP3-208ENST00000490999 IGLV1-50A0A075B6I6 118 aa9.2□□□□□ -0.94
SCAMP3-208ENST00000490999 A0A087WZ39 114 aa9.2□□□□□ -0.94
SCAMP3-208ENST00000490999 FAM168BA1KXE4 195 aa9.2□□□□□ -0.94
SCAMP3-208ENST00000490999 HIGD1CA8MV81 97 aa9.2□□□□□ -0.94
SCAMP3-208ENST00000490999 MALP21145 153 aa9.2□□□□□ -0.94
SCAMP3-208ENST00000490999 UBE2D1P51668 147 aa9.19□□□□□ -0.94
SCAMP3-208ENST00000490999 TMEM191AQ9H0A3 160 aa9.19□□□□□ -0.94
SCAMP3-208ENST00000490999 NAT8Q9UHE5 227 aa9.19□□□□□ -0.94
SCAMP3-208ENST00000490999 MUC17Q685J3 4493 aa9.18□□□□□ -0.94
SCAMP3-208ENST00000490999 COX7A2LO14548 114 aa9.18□□□□□ -0.94
SCAMP3-208ENST00000490999 TSHBP01222 138 aa9.18□□□□□ -0.94
SCAMP3-208ENST00000490999 RPL23P62829 140 aaKnown RBP9.18□□□□□ -0.94
SCAMP3-208ENST00000490999 RNASE13Q5GAN3 156 aaKnown RBP9.18□□□□□ -0.94
SCAMP3-208ENST00000490999 MRAP2Q96G30 205 aa9.18□□□□□ -0.94
SCAMP3-208ENST00000490999 CDC42SE2Q9NRR3 84 aa9.18□□□□□ -0.94
SCAMP3-208ENST00000490999 V9GYV3 84 aa9.18□□□□□ -0.94
SCAMP3-208ENST00000490999 TRBV6-5A0A0K0K1A5 114 aa9.17□□□□□ -0.94
SCAMP3-208ENST00000490999 I3L3M4 83 aa9.17□□□□□ -0.94
SCAMP3-208ENST00000490999 ESDP10768 282 aa9.17□□□□□ -0.94
SCAMP3-208ENST00000490999 PMCHP20382 165 aa9.17□□□□□ -0.94
SCAMP3-208ENST00000490999 RIGQ13278 110 aa9.17□□□□□ -0.94
SCAMP3-208ENST00000490999 FAM19A5Q7Z5A7 132 aaPredicted RBP9.17□□□□□ -0.94
SCAMP3-208ENST00000490999 SPAG11BQ08648 103 aa9.16□□□□□ -0.94
SCAMP3-208ENST00000490999 ADIRFQ15847 76 aa9.16□□□□□ -0.94
SCAMP3-208ENST00000490999 NAT8BQ9UHF3 227 aa9.16□□□□□ -0.94
SCAMP3-208ENST00000490999 C9JQL5 133 aa9.15□□□□□ -0.94
SCAMP3-208ENST00000490999 TSPAN13O95857 204 aa9.15□□□□□ -0.94
SCAMP3-208ENST00000490999 SRSF3P84103 164 aaKnown RBP9.15□□□□□ -0.94
SCAMP3-208ENST00000490999 C5orf38Q86SI9 138 aa9.15□□□□□ -0.94
SCAMP3-208ENST00000490999 PPP1R17O96001 155 aa9.14□□□□□ -0.95
SCAMP3-208ENST00000490999 RAB4AP20338 218 aa9.14□□□□□ -0.95
SCAMP3-208ENST00000490999 MRPL52Q86TS9 123 aaKnown RBP9.14□□□□□ -0.95
SCAMP3-208ENST00000490999 TRAV13-1A0A0B4J241 112 aa9.13□□□□□ -0.95
SCAMP3-208ENST00000490999 A0A1B0GW15 77 aa9.13□□□□□ -0.95
SCAMP3-208ENST00000490999 SMIM27A0A1W2PRY6 76 aa9.13□□□□□ -0.95
SCAMP3-208ENST00000490999 RAB14P61106 215 aa9.13□□□□□ -0.95
SCAMP3-208ENST00000490999 C2orf48Q96LS8 159 aa9.13□□□□□ -0.95
SCAMP3-208ENST00000490999 ST20Q9HBF5 79 aa9.13□□□□□ -0.95
SCAMP3-208ENST00000490999 C7orf77A4D0Y5 90 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 829.3 ms