RNA–Protein interactions for RNA: ENST00000490883.1

SEMA3A-207, Transcript of semaphorin 3A, humanhuman

TSL 5

Gene SEMA3A, Length 237 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-207ENST00000490883 V9GYH0 126 aa-0.38□□□□□ -2.47
SEMA3A-207ENST00000490883 MUC2Q02817 5179 aa-0.38□□□□□ -2.47
SEMA3A-207ENST00000490883 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.39□□□□□ -2.47
SEMA3A-207ENST00000490883 PPP3R2Q96LZ3 170 aa-0.39□□□□□ -2.47
SEMA3A-207ENST00000490883 LPAP08519 4548 aa-0.39□□□□□ -2.47
SEMA3A-207ENST00000490883 PPRC1Q5VV67 1664 aaKnown RBP-0.4□□□□□ -2.47
SEMA3A-207ENST00000490883 HSPG2P98160 4391 aa-0.4□□□□□ -2.47
SEMA3A-207ENST00000490883 LRP2P98164 4655 aa-0.4□□□□□ -2.47
SEMA3A-207ENST00000490883 FLNAP21333 2647 aaKnown RBP-0.4□□□□□ -2.47
SEMA3A-207ENST00000490883 S100A3P33764 101 aa-0.4□□□□□ -2.47
SEMA3A-207ENST00000490883 SPANXDQ9BXN6 97 aa-0.4□□□□□ -2.47
SEMA3A-207ENST00000490883 TP53AIP1Q9HCN2 124 aa-0.4□□□□□ -2.47
SEMA3A-207ENST00000490883 NDUFA4L2Q9NRX3 87 aa-0.4□□□□□ -2.47
SEMA3A-207ENST00000490883 GOLGA4Q13439 2230 aaKnown RBP-0.4□□□□□ -2.47
SEMA3A-207ENST00000490883 MBD5Q9P267 1494 aa-0.41□□□□□ -2.47
SEMA3A-207ENST00000490883 TRBV7-3A0A075B6L6 115 aa-0.41□□□□□ -2.48
SEMA3A-207ENST00000490883 LOC100130705A0A1B0GUX0 176 aa-0.41□□□□□ -2.48
SEMA3A-207ENST00000490883 I3L2K1 104 aa-0.41□□□□□ -2.48
SEMA3A-207ENST00000490883 FGF7P21781 194 aa-0.41□□□□□ -2.48
SEMA3A-207ENST00000490883 SPRR1AP35321 89 aa-0.41□□□□□ -2.48
SEMA3A-207ENST00000490883 COX17Q14061 63 aa-0.41□□□□□ -2.48
SEMA3A-207ENST00000490883 TMEM170BQ5T4T1 132 aa-0.41□□□□□ -2.48
SEMA3A-207ENST00000490883 TSC22D3Q99576 134 aa-0.41□□□□□ -2.48
SEMA3A-207ENST00000490883 MGST2Q99735 147 aa-0.41□□□□□ -2.48
SEMA3A-207ENST00000490883 F8VRH5 84 aa-0.42□□□□□ -2.48
SEMA3A-207ENST00000490883 UQCR11O14957 56 aa-0.42□□□□□ -2.48
SEMA3A-207ENST00000490883 BAGE2Q86Y30 109 aa-0.42□□□□□ -2.48
SEMA3A-207ENST00000490883 FAM107BQ9H098 131 aa-0.42□□□□□ -2.48
SEMA3A-207ENST00000490883 ERCC6L2Q5T890 1561 aa-0.42□□□□□ -2.48
SEMA3A-207ENST00000490883 GVINP1Q7Z2Y8 2422 aa-0.43□□□□□ -2.48
SEMA3A-207ENST00000490883 SBF2Q86WG5 1849 aa-0.43□□□□□ -2.48
SEMA3A-207ENST00000490883 APOC2P02655 101 aa-0.43□□□□□ -2.48
SEMA3A-207ENST00000490883 DYNLRB1Q9NP97 96 aa-0.43□□□□□ -2.48
SEMA3A-207ENST00000490883 LINC01558Q9Y6Z2 57 aa-0.43□□□□□ -2.48
SEMA3A-207ENST00000490883 FAT2Q9NYQ8 4349 aa-0.43□□□□□ -2.48
SEMA3A-207ENST00000490883 DCHS2Q6V1P9 2916 aa-0.44□□□□□ -2.48
SEMA3A-207ENST00000490883 PIEZO2Q9H5I5 2752 aa-0.44□□□□□ -2.48
SEMA3A-207ENST00000490883 CPSF1Q10570 1443 aaKnown RBP-0.44□□□□□ -2.48
SEMA3A-207ENST00000490883 NAIPQ13075 1403 aa-0.44□□□□□ -2.48
SEMA3A-207ENST00000490883 CSPG4Q6UVK1 2322 aa-0.44□□□□□ -2.48
SEMA3A-207ENST00000490883 IGLC7A0M8Q6 106 aa-0.44□□□□□ -2.48
SEMA3A-207ENST00000490883 SPRR2DP22532 72 aa-0.44□□□□□ -2.48
SEMA3A-207ENST00000490883 TPPP2P59282 170 aa-0.44□□□□□ -2.48
SEMA3A-207ENST00000490883 Q6JHZ5 121 aa-0.44□□□□□ -2.48
SEMA3A-207ENST00000490883 C8orf59Q8N0T1 100 aaPredicted RBP-0.44□□□□□ -2.48
SEMA3A-207ENST00000490883 C1orf54Q8WWF1 131 aa-0.44□□□□□ -2.48
SEMA3A-207ENST00000490883 TSLPQ969D9 159 aa-0.44□□□□□ -2.48
SEMA3A-207ENST00000490883 PSME4Q14997 1843 aa-0.44□□□□□ -2.48
SEMA3A-207ENST00000490883 KIF21AQ7Z4S6 1674 aa-0.45□□□□□ -2.48
SEMA3A-207ENST00000490883 MIF4GDA9UHW6 222 aaKnown RBP-0.45□□□□□ -2.48
SEMA3A-207ENST00000490883 CATR1Q13166 79 aa-0.45□□□□□ -2.48
SEMA3A-207ENST00000490883 SRRM2Q9UQ35 2752 aaKnown RBP-0.45□□□□□ -2.48
SEMA3A-207ENST00000490883 C10orf71Q711Q0 1435 aa-0.46□□□□□ -2.48
SEMA3A-207ENST00000490883 BCL9LQ86UU0 1499 aa-0.46□□□□□ -2.48
SEMA3A-207ENST00000490883 KMT2CQ8NEZ4 4911 aaKnown RBP-0.46□□□□□ -2.48
SEMA3A-207ENST00000490883 SSSCA1O60232 199 aa-0.46□□□□□ -2.48
SEMA3A-207ENST00000490883 DCDP81605 110 aaKnown RBP-0.46□□□□□ -2.48
SEMA3A-207ENST00000490883 C5orf38Q86SI9 138 aa-0.46□□□□□ -2.48
SEMA3A-207ENST00000490883 RIMS1Q86UR5 1692 aaKnown RBP-0.46□□□□□ -2.48
SEMA3A-207ENST00000490883 BSNQ9UPA5 3926 aa-0.46□□□□□ -2.48
SEMA3A-207ENST00000490883 HMGN4O00479 90 aa-0.47□□□□□ -2.48
SEMA3A-207ENST00000490883 PRM1P04553 51 aa-0.47□□□□□ -2.48
SEMA3A-207ENST00000490883 COMMD6Q7Z4G1 85 aa-0.47□□□□□ -2.48
SEMA3A-207ENST00000490883 IFNGP01579 166 aa-0.48□□□□□ -2.49
SEMA3A-207ENST00000490883 APOC3P02656 99 aa-0.48□□□□□ -2.49
SEMA3A-207ENST00000490883 LINC00474Q9P2X8 69 aa-0.48□□□□□ -2.49
SEMA3A-207ENST00000490883 HERC1Q15751 4861 aa-0.48□□□□□ -2.49
SEMA3A-207ENST00000490883 MAP1BP46821 2468 aaKnown RBP-0.48□□□□□ -2.49
SEMA3A-207ENST00000490883 TRBV6-1A0A0K0K1D8 114 aa-0.49□□□□□ -2.49
SEMA3A-207ENST00000490883 LOC285095A0A1B0GVY8 99 aa-0.49□□□□□ -2.49
SEMA3A-207ENST00000490883 AKAIN1P0CW23 69 aa-0.49□□□□□ -2.49
SEMA3A-207ENST00000490883 PP6455Q8WZ26 134 aa-0.49□□□□□ -2.49
SEMA3A-207ENST00000490883 ZANQ9Y493 2812 aa-0.49□□□□□ -2.49
SEMA3A-207ENST00000490883 HECTD4Q9Y4D8 3996 aa-0.5□□□□□ -2.49
SEMA3A-207ENST00000490883 OOSP1A8MZH6 123 aa-0.5□□□□□ -2.49
SEMA3A-207ENST00000490883 PIGYQ3MUY2 71 aa-0.5□□□□□ -2.49
SEMA3A-207ENST00000490883 PAPPAQ13219 1627 aa-0.5□□□□□ -2.49
SEMA3A-207ENST00000490883 QRICH2Q9H0J4 1663 aa-0.5□□□□□ -2.49
SEMA3A-207ENST00000490883 LAMA5O15230 3695 aa-0.5□□□□□ -2.49
SEMA3A-207ENST00000490883 ATRQ13535 2644 aa-0.51□□□□□ -2.49
SEMA3A-207ENST00000490883 SFT2D2O95562 160 aa-0.51□□□□□ -2.49
SEMA3A-207ENST00000490883 KRTAP19-7Q3SYF9 63 aa-0.51□□□□□ -2.49
SEMA3A-207ENST00000490883 MRPL54Q6P161 138 aaKnown RBP-0.51□□□□□ -2.49
SEMA3A-207ENST00000490883 WNK1Q9H4A3 2382 aa-0.51□□□□□ -2.49
SEMA3A-207ENST00000490883 ALMS1Q8TCU4 4167 aa-0.51□□□□□ -2.49
SEMA3A-207ENST00000490883 SPTA1P02549 2419 aa-0.52□□□□□ -2.49
SEMA3A-207ENST00000490883 FAT1Q14517 4588 aa-0.52□□□□□ -2.49
SEMA3A-207ENST00000490883 ROBO1Q9Y6N7 1651 aa-0.52□□□□□ -2.49
SEMA3A-207ENST00000490883 A2ML1A8K2U0 1454 aa-0.52□□□□□ -2.49
SEMA3A-207ENST00000490883 SHANK2Q9UPX8 1470 aa-0.52□□□□□ -2.49
SEMA3A-207ENST00000490883 PDZD2O15018 2839 aa-0.52□□□□□ -2.49
SEMA3A-207ENST00000490883 ROCK2O75116 1388 aaKnown RBP-0.53□□□□□ -2.49
SEMA3A-207ENST00000490883 TNFP01375 233 aa-0.53□□□□□ -2.49
SEMA3A-207ENST00000490883 MYOZ3Q8TDC0 251 aa-0.53□□□□□ -2.49
SEMA3A-207ENST00000490883 RAPGEF6Q8TEU7 1601 aa-0.53□□□□□ -2.49
SEMA3A-207ENST00000490883 KTN1Q86UP2 1357 aaKnown RBP-0.54□□□□□ -2.5
SEMA3A-207ENST00000490883 FXYD6-FXYD2A0A087WZ82 144 aa-0.54□□□□□ -2.5
SEMA3A-207ENST00000490883 SPRR4Q96PI1 79 aa-0.54□□□□□ -2.5
SEMA3A-207ENST00000490883 CDC42SE2Q9NRR3 84 aa-0.54□□□□□ -2.5
SEMA3A-207ENST00000490883 MYOM1P52179 1685 aa-0.54□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms