RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 MUSTN1Q8IVN3 82 aa0.43□□□□□ -2.34
CCDC39-206ENST00000489868 FDCSPQ8NFU4 85 aa0.43□□□□□ -2.34
CCDC39-206ENST00000489868 COX7B2Q8TF08 81 aa0.43□□□□□ -2.34
CCDC39-206ENST00000489868 PPP1R1CQ8WVI7 109 aa0.43□□□□□ -2.34
CCDC39-206ENST00000489868 PATE1Q8WXA2 126 aa0.43□□□□□ -2.34
CCDC39-206ENST00000489868 FAM103A1Q9BTL3 118 aaKnown RBP0.43□□□□□ -2.34
CCDC39-206ENST00000489868 PRR15LQ9BU68 103 aa0.43□□□□□ -2.34
CCDC39-206ENST00000489868 FXYD6Q9H0Q3 95 aa0.43□□□□□ -2.34
CCDC39-206ENST00000489868 WFDC10AQ9H1F0 79 aa0.43□□□□□ -2.34
CCDC39-206ENST00000489868 PROK2Q9HC23 129 aa0.43□□□□□ -2.34
CCDC39-206ENST00000489868 KLK9Q9UKQ9 250 aa0.43□□□□□ -2.34
CCDC39-206ENST00000489868 HILPDAQ9Y5L2 63 aa0.43□□□□□ -2.34
CCDC39-206ENST00000489868 LENEPQ9Y5L5 61 aa0.43□□□□□ -2.34
CCDC39-206ENST00000489868 V9GYH0 126 aa0.43□□□□□ -2.34
CCDC39-206ENST00000489868 INO80Q9ULG1 1556 aaPredicted RBP0.43□□□□□ -2.34
CCDC39-206ENST00000489868 BCORL1Q5H9F3 1711 aa0.43□□□□□ -2.34
CCDC39-206ENST00000489868 ZNF106Q9H2Y7 1883 aaKnown RBP0.43□□□□□ -2.34
CCDC39-206ENST00000489868 NEXMIFQ5QGS0 1516 aa0.43□□□□□ -2.34
CCDC39-206ENST00000489868 KCPQ6ZWJ8 1503 aa0.43□□□□□ -2.34
CCDC39-206ENST00000489868 FOCADQ5VW36 1801 aa0.43□□□□□ -2.34
CCDC39-206ENST00000489868 XIRP1Q702N8 1843 aaKnown RBP0.43□□□□□ -2.34
CCDC39-206ENST00000489868 LRP5O75197 1615 aa0.42□□□□□ -2.34
CCDC39-206ENST00000489868 MADDQ8WXG6 1647 aa0.42□□□□□ -2.34
CCDC39-206ENST00000489868 LRRC9Q6ZRR7 1453 aa0.42□□□□□ -2.34
CCDC39-206ENST00000489868 PRXQ9BXM0 1461 aa0.42□□□□□ -2.34
CCDC39-206ENST00000489868 DOCK3Q8IZD9 2030 aa0.42□□□□□ -2.34
CCDC39-206ENST00000489868 ANKRD26Q9UPS8 1709 aa0.42□□□□□ -2.34
CCDC39-206ENST00000489868 ABCA8O94911 1581 aa0.42□□□□□ -2.34
CCDC39-206ENST00000489868 CFAP74Q9C0B2 1584 aa0.42□□□□□ -2.34
CCDC39-206ENST00000489868 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.42□□□□□ -2.34
CCDC39-206ENST00000489868 A0A087WVE0 104 aa0.42□□□□□ -2.34
CCDC39-206ENST00000489868 CTXND1A0A1B0GTU2 59 aa0.42□□□□□ -2.34
CCDC39-206ENST00000489868 C10orf142B7Z368 130 aa0.42□□□□□ -2.34
CCDC39-206ENST00000489868 M0R3E3 92 aa0.42□□□□□ -2.34
CCDC39-206ENST00000489868 UQCR11O14957 56 aa0.42□□□□□ -2.34
CCDC39-206ENST00000489868 PDE6GP18545 87 aa0.42□□□□□ -2.34
CCDC39-206ENST00000489868 S100A3P33764 101 aa0.42□□□□□ -2.34
CCDC39-206ENST00000489868 IFI27P40305 119 aaPredicted RBP0.42□□□□□ -2.34
CCDC39-206ENST00000489868 CCL18P55774 89 aa0.42□□□□□ -2.34
CCDC39-206ENST00000489868 RPL37AP61513 92 aaKnown RBP0.42□□□□□ -2.34
CCDC39-206ENST00000489868 ATXN8Q156A1 80 aa0.42□□□□□ -2.34
CCDC39-206ENST00000489868 FAM74A4Q5TZK3 123 aa0.42□□□□□ -2.34
CCDC39-206ENST00000489868 Q86TA4 180 aa0.42□□□□□ -2.34
CCDC39-206ENST00000489868 AMELXQ99217 191 aa0.42□□□□□ -2.34
CCDC39-206ENST00000489868 TMEM14CQ9P0S9 112 aa0.42□□□□□ -2.34
CCDC39-206ENST00000489868 UBE2D4Q9Y2X8 147 aa0.42□□□□□ -2.34
CCDC39-206ENST00000489868 R4GMQ9 66 aa0.42□□□□□ -2.34
CCDC39-206ENST00000489868 V9GYV3 84 aa0.42□□□□□ -2.34
CCDC39-206ENST00000489868 SCN10AQ9Y5Y9 1956 aa0.42□□□□□ -2.34
CCDC39-206ENST00000489868 ROBO1Q9Y6N7 1651 aa0.42□□□□□ -2.34
CCDC39-206ENST00000489868 HMGXB3Q12766 1538 aa0.42□□□□□ -2.34
CCDC39-206ENST00000489868 CDK13Q14004 1512 aaKnown RBP0.42□□□□□ -2.34
CCDC39-206ENST00000489868 ASXL1Q8IXJ9 1541 aa0.42□□□□□ -2.34
CCDC39-206ENST00000489868 EHBP1L1Q8N3D4 1523 aa0.42□□□□□ -2.34
CCDC39-206ENST00000489868 AKAP12Q02952 1782 aa0.42□□□□□ -2.34
CCDC39-206ENST00000489868 TMEM131LA2VDJ0 1609 aa0.42□□□□□ -2.34
CCDC39-206ENST00000489868 MROH1Q8NDA8 1641 aa0.42□□□□□ -2.34
CCDC39-206ENST00000489868 MRC1P22897 1456 aa0.41□□□□□ -2.34
CCDC39-206ENST00000489868 C1orf167Q5SNV9 1468 aa0.41□□□□□ -2.34
CCDC39-206ENST00000489868 FANCD2Q9BXW9 1451 aa0.41□□□□□ -2.34
CCDC39-206ENST00000489868 NUP210Q8TEM1 1887 aaPredicted RBP0.41□□□□□ -2.34
CCDC39-206ENST00000489868 MON2Q7Z3U7 1717 aa0.41□□□□□ -2.34
CCDC39-206ENST00000489868 ARAP2Q8WZ64 1704 aa0.41□□□□□ -2.34
CCDC39-206ENST00000489868 DIP2CQ9Y2E4 1556 aa0.41□□□□□ -2.34
CCDC39-206ENST00000489868 KIF13BQ9NQT8 1826 aa0.41□□□□□ -2.34
CCDC39-206ENST00000489868 TOPAZ1Q8N9V7 1692 aa0.41□□□□□ -2.34
CCDC39-206ENST00000489868 A0A087WTM6 91 aa0.41□□□□□ -2.34
CCDC39-206ENST00000489868 A0A0D9SFI3 127 aa0.41□□□□□ -2.34
CCDC39-206ENST00000489868 TRBV7-4A0A0J9YYF1 115 aa0.41□□□□□ -2.34
CCDC39-206ENST00000489868 NBDYA0A0U1RRE5 68 aa0.41□□□□□ -2.34
CCDC39-206ENST00000489868 A0A1B0GUT8 65 aa0.41□□□□□ -2.34
CCDC39-206ENST00000489868 SNRPGP15A8MWD9 76 aa0.41□□□□□ -2.34
CCDC39-206ENST00000489868 H0Y9P7 68 aa0.41□□□□□ -2.34
CCDC39-206ENST00000489868 M0R135 149 aa0.41□□□□□ -2.34
CCDC39-206ENST00000489868 MGPP08493 103 aa0.41□□□□□ -2.34
CCDC39-206ENST00000489868 ZNF137PP52743 207 aa0.41□□□□□ -2.34
CCDC39-206ENST00000489868 FXYD4P59646 89 aa0.41□□□□□ -2.34
CCDC39-206ENST00000489868 COX17Q14061 63 aa0.41□□□□□ -2.34
CCDC39-206ENST00000489868 FXYD3Q14802 87 aa0.41□□□□□ -2.34
CCDC39-206ENST00000489868 LINC00322Q6ZN03 302 aaPredicted RBP0.41□□□□□ -2.34
CCDC39-206ENST00000489868 DEFB107AQ8IZN7 70 aa0.41□□□□□ -2.34
CCDC39-206ENST00000489868 LINC01558Q9Y6Z2 57 aa0.41□□□□□ -2.34
CCDC39-206ENST00000489868 URB2Q14146 1524 aaKnown RBP0.41□□□□□ -2.34
CCDC39-206ENST00000489868 N4BP2Q86UW6 1770 aaPredicted RBP0.41□□□□□ -2.34
CCDC39-206ENST00000489868 KDM6BO15054 1643 aa0.41□□□□□ -2.34
CCDC39-206ENST00000489868 RALGAPA2Q2PPJ7 1873 aa0.41□□□□□ -2.34
CCDC39-206ENST00000489868 FER1L6Q2WGJ9 1857 aa0.41□□□□□ -2.34
CCDC39-206ENST00000489868 DOCK5Q9H7D0 1870 aa0.41□□□□□ -2.34
CCDC39-206ENST00000489868 MAP3K4Q9Y6R4 1608 aa0.41□□□□□ -2.34
CCDC39-206ENST00000489868 CHD1O14646 1710 aa0.41□□□□□ -2.34
CCDC39-206ENST00000489868 ANAPC1Q9H1A4 1944 aa0.4□□□□□ -2.34
CCDC39-206ENST00000489868 ZC3H13Q5T200 1668 aaKnown RBP0.4□□□□□ -2.34
CCDC39-206ENST00000489868 USP54Q70EL1 1684 aa0.4□□□□□ -2.34
CCDC39-206ENST00000489868 KIDINS220Q9ULH0 1771 aa0.4□□□□□ -2.35
CCDC39-206ENST00000489868 TOP2AP11388 1531 aaKnown RBP0.4□□□□□ -2.35
CCDC39-206ENST00000489868 CLASP1Q7Z460 1538 aa0.4□□□□□ -2.35
CCDC39-206ENST00000489868 MGAMO43451 1857 aa0.4□□□□□ -2.35
CCDC39-206ENST00000489868 TOP2BQ02880 1626 aa0.4□□□□□ -2.35
CCDC39-206ENST00000489868 PREX2Q70Z35 1606 aa0.4□□□□□ -2.35
CCDC39-206ENST00000489868 IQGAP3Q86VI3 1631 aa0.4□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms