RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 FAM229BQ4G0N7 80 aa8.4□□□□□ -1.06
UFD1-209ENST00000489406 C10orf25Q5T742 122 aa8.4□□□□□ -1.06
UFD1-209ENST00000489406 C5orf38Q86SI9 138 aa8.4□□□□□ -1.06
UFD1-209ENST00000489406 SMDT1Q9H4I9 107 aa8.4□□□□□ -1.06
UFD1-209ENST00000489406 KRTAP4-16G5E9R7 235 aaPredicted RBP8.39□□□□□ -1.07
UFD1-209ENST00000489406 SIX6O95475 246 aa8.39□□□□□ -1.07
UFD1-209ENST00000489406 NCR2O95944 276 aa8.39□□□□□ -1.07
UFD1-209ENST00000489406 KRTAP19-1Q8IUB9 90 aa8.38□□□□□ -1.07
UFD1-209ENST00000489406 TPPP3Q9BW30 176 aa8.38□□□□□ -1.07
UFD1-209ENST00000489406 CDC42SE2Q9NRR3 84 aa8.38□□□□□ -1.07
UFD1-209ENST00000489406 A0A1B0GVG6 124 aa8.37□□□□□ -1.07
UFD1-209ENST00000489406 C6orf48Q9UBA6 75 aa8.37□□□□□ -1.07
UFD1-209ENST00000489406 FLGP20930 4061 aaPredicted RBP8.37□□□□□ -1.07
UFD1-209ENST00000489406 C1orf196B1AJZ1 125 aa8.36□□□□□ -1.07
UFD1-209ENST00000489406 NDUFA1O15239 70 aa8.36□□□□□ -1.07
UFD1-209ENST00000489406 C9orf129Q5T035 196 aaKnown RBP8.36□□□□□ -1.07
UFD1-209ENST00000489406 UNQ6190/PRO20217Q6UXQ8 127 aa8.36□□□□□ -1.07
UFD1-209ENST00000489406 ALG5Q9Y673 324 aa8.36□□□□□ -1.07
UFD1-209ENST00000489406 FAM74A7A6NL05 159 aa8.35□□□□□ -1.07
UFD1-209ENST00000489406 BCE1O60756 84 aa8.35□□□□□ -1.07
UFD1-209ENST00000489406 XP32Q5T750 250 aa8.35□□□□□ -1.07
UFD1-209ENST00000489406 S100A5P33763 92 aa8.34□□□□□ -1.07
UFD1-209ENST00000489406 DEFA1P59665 94 aa8.34□□□□□ -1.07
UFD1-209ENST00000489406 TMEM241Q24JQ0 296 aa8.34□□□□□ -1.07
UFD1-209ENST00000489406 ACTR3CQ9C0K3 210 aaPredicted RBP8.34□□□□□ -1.07
UFD1-209ENST00000489406 GATD1Q8NB37 220 aa8.33□□□□□ -1.08
UFD1-209ENST00000489406 OR10D4PQ8NGN7 298 aa8.33□□□□□ -1.08
UFD1-209ENST00000489406 ORAOV1Q8WV07 137 aa8.33□□□□□ -1.08
UFD1-209ENST00000489406 NKX6-2Q9C056 277 aaPredicted RBP8.33□□□□□ -1.08
UFD1-209ENST00000489406 NUDT15Q9NV35 164 aa8.33□□□□□ -1.08
UFD1-209ENST00000489406 UBE2D4Q9Y2X8 147 aa8.33□□□□□ -1.08
UFD1-209ENST00000489406 C22orf24Q9Y442 160 aa8.33□□□□□ -1.08
UFD1-209ENST00000489406 IGLV8-61A0A075B6I0 122 aa8.32□□□□□ -1.08
UFD1-209ENST00000489406 F8WDY8 70 aa8.32□□□□□ -1.08
UFD1-209ENST00000489406 CTRLP40313 264 aa8.32□□□□□ -1.08
UFD1-209ENST00000489406 RPL39LQ96EH5 51 aaKnown RBP8.32□□□□□ -1.08
UFD1-209ENST00000489406 ATP6V0CP27449 155 aa8.31□□□□□ -1.08
UFD1-209ENST00000489406 AKR1C3P42330 323 aa8.31□□□□□ -1.08
UFD1-209ENST00000489406 SPAG11AQ6PDA7 123 aa8.31□□□□□ -1.08
UFD1-209ENST00000489406 C3orf22Q8N5N4 141 aa8.31□□□□□ -1.08
UFD1-209ENST00000489406 DAND5Q8N907 189 aa8.31□□□□□ -1.08
UFD1-209ENST00000489406 TRAV13-1A0A0B4J241 112 aa8.3□□□□□ -1.08
UFD1-209ENST00000489406 TRGC1P0CF51 173 aa8.3□□□□□ -1.08
UFD1-209ENST00000489406 IGLC6P0CF74 106 aa8.3□□□□□ -1.08
UFD1-209ENST00000489406 LBHQ53QV2 105 aaPredicted RBP8.3□□□□□ -1.08
UFD1-209ENST00000489406 SDHAF1A6NFY7 115 aa8.29□□□□□ -1.08
UFD1-209ENST00000489406 CCDC160A6NGH7 325 aa8.29□□□□□ -1.08
UFD1-209ENST00000489406 MBP02144 154 aa8.29□□□□□ -1.08
UFD1-209ENST00000489406 PMCHP20382 165 aa8.29□□□□□ -1.08
UFD1-209ENST00000489406 RNASE13Q5GAN3 156 aaKnown RBP8.29□□□□□ -1.08
UFD1-209ENST00000489406 MZT2BQ6NZ67 158 aa8.29□□□□□ -1.08
UFD1-209ENST00000489406 MRPL52Q86TS9 123 aaKnown RBP8.29□□□□□ -1.08
UFD1-209ENST00000489406 PPP1R1CQ8WVI7 109 aa8.29□□□□□ -1.08
UFD1-209ENST00000489406 INMT-MINDY4F8WBC2 141 aa8.28□□□□□ -1.08
UFD1-209ENST00000489406 H2AFB2P0C5Z0 115 aa8.28□□□□□ -1.08
UFD1-209ENST00000489406 PCOTHQ58A44 107 aa8.28□□□□□ -1.08
UFD1-209ENST00000489406 MRAP2Q96G30 205 aa8.28□□□□□ -1.08
UFD1-209ENST00000489406 I3L3M4 83 aa8.27□□□□□ -1.09
UFD1-209ENST00000489406 PLA2G10O15496 165 aa8.27□□□□□ -1.09
UFD1-209ENST00000489406 TNFRSF6BO95407 300 aa8.27□□□□□ -1.09
UFD1-209ENST00000489406 ZNF726P1Q15940 193 aa8.27□□□□□ -1.09
UFD1-209ENST00000489406 NDUFC2-KCTD14E9PQ53 114 aa8.26□□□□□ -1.09
UFD1-209ENST00000489406 COX6B2Q6YFQ2 88 aa8.26□□□□□ -1.09
UFD1-209ENST00000489406 BAGE2Q86Y30 109 aa8.26□□□□□ -1.09
UFD1-209ENST00000489406 STOML3Q8TAV4 291 aa8.26□□□□□ -1.09
UFD1-209ENST00000489406 KIR2DL4Q99706 377 aa8.26□□□□□ -1.09
UFD1-209ENST00000489406 PSMG3Q9BT73 122 aaPredicted RBP8.26□□□□□ -1.09
UFD1-209ENST00000489406 LYRM1O43325 122 aa8.25□□□□□ -1.09
UFD1-209ENST00000489406 MPC2O95563 127 aa8.25□□□□□ -1.09
UFD1-209ENST00000489406 IL7P13232 177 aa8.25□□□□□ -1.09
UFD1-209ENST00000489406 UBE2AP49459 152 aa8.25□□□□□ -1.09
UFD1-209ENST00000489406 CYTL1Q9NRR1 136 aa8.25□□□□□ -1.09
UFD1-209ENST00000489406 TNFSF18Q9UNG2 199 aa8.25□□□□□ -1.09
UFD1-209ENST00000489406 SERF2P84101 59 aa8.24□□□□□ -1.09
UFD1-209ENST00000489406 CST9LP1Q5W188 147 aa8.24□□□□□ -1.09
UFD1-209ENST00000489406 KRTAP13-1Q8IUC0 172 aa8.24□□□□□ -1.09
UFD1-209ENST00000489406 TMEM242Q9NWH2 141 aa8.24□□□□□ -1.09
UFD1-209ENST00000489406 NOL3O60936 208 aaKnown RBP8.23□□□□□ -1.09
UFD1-209ENST00000489406 LYZL1Q6UWQ5 148 aa8.23□□□□□ -1.09
UFD1-209ENST00000489406 MRPL55Q7Z7F7 128 aaKnown RBP8.23□□□□□ -1.09
UFD1-209ENST00000489406 PACRGQ96M98 296 aaPredicted RBP8.23□□□□□ -1.09
UFD1-209ENST00000489406 CTXND1A0A1B0GTU2 59 aa8.22□□□□□ -1.09
UFD1-209ENST00000489406 RPL37AP8A6NKH3 93 aa8.22□□□□□ -1.09
UFD1-209ENST00000489406 CFC1P0CG37 223 aa8.22□□□□□ -1.09
UFD1-209ENST00000489406 LINC00469Q8N7U9 141 aa8.22□□□□□ -1.09
UFD1-209ENST00000489406 TCEAL7Q9BRU2 100 aa8.22□□□□□ -1.09
UFD1-209ENST00000489406 MARVELD1Q9BSK0 173 aa8.22□□□□□ -1.09
UFD1-209ENST00000489406 F2Z2F3 143 aa8.21□□□□□ -1.1
UFD1-209ENST00000489406 H2BFSP57053 126 aa8.21□□□□□ -1.1
UFD1-209ENST00000489406 KRTAP6-3Q3LI67 103 aa8.21□□□□□ -1.1
UFD1-209ENST00000489406 TRBV30A0A0K0K1B3 111 aa8.2□□□□□ -1.1
UFD1-209ENST00000489406 S100A9P06702 114 aaKnown RBP8.2□□□□□ -1.1
UFD1-209ENST00000489406 PET100P0DJ07 73 aa8.2□□□□□ -1.1
UFD1-209ENST00000489406 FOXA3P55318 350 aaPredicted RBP8.2□□□□□ -1.1
UFD1-209ENST00000489406 TWIST1Q15672 202 aa8.2□□□□□ -1.1
UFD1-209ENST00000489406 C2orf82Q6UX34 121 aa8.2□□□□□ -1.1
UFD1-209ENST00000489406 RNASE7Q9H1E1 156 aaKnown RBP8.2□□□□□ -1.1
UFD1-209ENST00000489406 XAGE1AQ9HD64 81 aa8.2□□□□□ -1.1
UFD1-209ENST00000489406 NDUFA12Q9UI09 145 aa8.2□□□□□ -1.1
UFD1-209ENST00000489406 C7orf77A4D0Y5 90 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms